Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is 209695471

Identifier: 209695471

GI number: 209695471

Start: 2162473

End: 2163162

Strand: Direct

Name: 209695471

Synonym: VSAL_I2020

Alternate gene names: NA

Gene position: 2162473-2163162 (Clockwise)

Preceding gene: 209695470

Following gene: 209695472

Centisome position: 65.03

GC content: 37.68

Gene sequence:

>690_bases
ATGAGTAATGAGACAAACACAGTGCACTATTATCAAGAAATTCAAAAAGTAATTAATGAAGCTCTTACTGACTTACAAGA
AAGTAAGGACAGTGGACGCTTACCGAAAAATCCGGTAAGTGCAAATCACTTTTTGATCCGATGGGTGACCACTGCGATTA
AATCACAGCGTTTTTCTCGTTGTGTCGTCAAAGATTTGCAGACTTGGCAAAAAGAAGGCCGTACGAAAGGGACTGGAACT
GAGCTTCCTGTTCGTTTTGAACATTATTCTCGCTTGTATCAAGCATTAGCGCCTATTGACACCGTGACTCCAATTACTAA
ATCAGTAGTAATGGGGTGGTGTGAGTCATTAGAAGAAAAAGAATGGTGTGTAACGACAGATTTTGAAATTTTAGAAAAAG
CGTCTTTGTTTTCAGATGGTGATCATTCGTTGATTATCTGTGCGACGCAATTAGCATCGTGTTTTGAAGGGGATGATGCT
GAAAATCAACTGCTTGTGAAGCCGTTGACGTGTTATGTTCGTGGTAATCATCATGAGTTTGTTGAATCGGCTTTTGAGCA
CGGTTTGATAGTACATAAGCGTTCTGACTATAAATCAAAAGTAAAATACCATGGTGAATATTTAATTTATCCAAATAACC
ACGGTATTCAATTAGGTGAAACGCCATTTTCATTTAATGTGAAAAAATAA

Upstream 100 bases:

>100_bases
AATGTTTCCTGCTGATTCTGCTTGGCCTATGGTGAGTTCCATGGCAGCATGTTCTATCTTATCTTTTGGTTGTTATTTTG
TTTTTGGACGTAAAGCGTAA

Downstream 100 bases:

>100_bases
CAGAATCGGTTACTTTCATTGTTCGATAAAAAGCGCAGATATTCTGCGCTTTTTTATTTTGTGGTTGTTTGTTTACTCTT
CTTTTTCTGCTTTTTTACAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 229; Mature: 228

Protein sequence:

>229_residues
MSNETNTVHYYQEIQKVINEALTDLQESKDSGRLPKNPVSANHFLIRWVTTAIKSQRFSRCVVKDLQTWQKEGRTKGTGT
ELPVRFEHYSRLYQALAPIDTVTPITKSVVMGWCESLEEKEWCVTTDFEILEKASLFSDGDHSLIICATQLASCFEGDDA
ENQLLVKPLTCYVRGNHHEFVESAFEHGLIVHKRSDYKSKVKYHGEYLIYPNNHGIQLGETPFSFNVKK

Sequences:

>Translated_229_residues
MSNETNTVHYYQEIQKVINEALTDLQESKDSGRLPKNPVSANHFLIRWVTTAIKSQRFSRCVVKDLQTWQKEGRTKGTGT
ELPVRFEHYSRLYQALAPIDTVTPITKSVVMGWCESLEEKEWCVTTDFEILEKASLFSDGDHSLIICATQLASCFEGDDA
ENQLLVKPLTCYVRGNHHEFVESAFEHGLIVHKRSDYKSKVKYHGEYLIYPNNHGIQLGETPFSFNVKK
>Mature_228_residues
SNETNTVHYYQEIQKVINEALTDLQESKDSGRLPKNPVSANHFLIRWVTTAIKSQRFSRCVVKDLQTWQKEGRTKGTGTE
LPVRFEHYSRLYQALAPIDTVTPITKSVVMGWCESLEEKEWCVTTDFEILEKASLFSDGDHSLIICATQLASCFEGDDAE
NQLLVKPLTCYVRGNHHEFVESAFEHGLIVHKRSDYKSKVKYHGEYLIYPNNHGIQLGETPFSFNVKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26261; Mature: 26130

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNETNTVHYYQEIQKVINEALTDLQESKDSGRLPKNPVSANHFLIRWVTTAIKSQRFSR
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
CVVKDLQTWQKEGRTKGTGTELPVRFEHYSRLYQALAPIDTVTPITKSVVMGWCESLEEK
HHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCC
EWCVTTDFEILEKASLFSDGDHSLIICATQLASCFEGDDAENQLLVKPLTCYVRGNHHEF
CCEEECCHHHHHHHHHCCCCCCEEEEEHHHHHHHHCCCCCCCEEEEEEEEEEEECCHHHH
VESAFEHGLIVHKRSDYKSKVKYHGEYLIYPNNHGIQLGETPFSFNVKK
HHHHHHCCEEEEECCCHHHHHEECCCEEEEECCCCEEECCCCCEECCCC
>Mature Secondary Structure 
SNETNTVHYYQEIQKVINEALTDLQESKDSGRLPKNPVSANHFLIRWVTTAIKSQRFSR
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
CVVKDLQTWQKEGRTKGTGTELPVRFEHYSRLYQALAPIDTVTPITKSVVMGWCESLEEK
HHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCC
EWCVTTDFEILEKASLFSDGDHSLIICATQLASCFEGDDAENQLLVKPLTCYVRGNHHEF
CCEEECCHHHHHHHHHCCCCCCEEEEEHHHHHHHHCCCCCCCEEEEEEEEEEEECCHHHH
VESAFEHGLIVHKRSDYKSKVKYHGEYLIYPNNHGIQLGETPFSFNVKK
HHHHHHCCEEEEECCCHHHHHEECCCEEEEECCCCEEECCCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA