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The map label for this gene is ybaY [H]

Identifier: 209695428

GI number: 209695428

Start: 2112219

End: 2112707

Strand: Direct

Name: ybaY [H]

Synonym: VSAL_I1969

Alternate gene names: 209695428

Gene position: 2112219-2112707 (Clockwise)

Preceding gene: 209695426

Following gene: 209695430

Centisome position: 63.52

GC content: 40.29

Gene sequence:

>489_bases
ATGAAAAAGTCATTATTAATTGCTTTATCAGTGGTTACGAGTGTTGTTATGGTTGGTTGTAATTCAACAGAAAAAACAGC
GAAAGCGCCTGTTGCTTCTGAAGTGGCTGTTCAAGTTGATACCACTCAGGTAGAAGAACCTCAAGCGGTAGTTACGCAGA
CTGTAACGGGTTCAGTTGGCTATCGTGAGCGTATTGCATTGCCACCAACGGCTGTTATTACCGTAACTTTGGCGGATGTA
TCTTTAGCTGATGCACCATCGAAAACGATTTCTGAGCAAACATTTAAAGCGGCTGACAAATCATCGCCATTTAATTACGC
TCTGGATTTCAAAACAGCAGATATTAAAGCGAATCACCGTTATTCAGTACGAGCAACGATTATGGTTGATGGTAAATTAC
GTTTTACAACGGATACCAATTATGCGGTGATTACTGACCAAGAAAAAACAATGACTCAAGACCTATTGCTAAAAGGTGTA
CGTCAGTAA

Upstream 100 bases:

>100_bases
GGAAGACAGCGTCGATTATTGGGTTTATATTTGTTGTTAGTCGGATGGAGTTGTACGTCAGAACATCGACACATATTTAT
AATTAAAAGAGAGTAAAACA

Downstream 100 bases:

>100_bases
GTCGTTATTATAAGTGATATGAAGTAATAATGTGCTTTAGATTAGCGCATTATTACTTTCTTAAAATGTTCAATTCTTCC
ATCGTCTTTAATGCTAATCC

Product: lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 162; Mature: 162

Protein sequence:

>162_residues
MKKSLLIALSVVTSVVMVGCNSTEKTAKAPVASEVAVQVDTTQVEEPQAVVTQTVTGSVGYRERIALPPTAVITVTLADV
SLADAPSKTISEQTFKAADKSSPFNYALDFKTADIKANHRYSVRATIMVDGKLRFTTDTNYAVITDQEKTMTQDLLLKGV
RQ

Sequences:

>Translated_162_residues
MKKSLLIALSVVTSVVMVGCNSTEKTAKAPVASEVAVQVDTTQVEEPQAVVTQTVTGSVGYRERIALPPTAVITVTLADV
SLADAPSKTISEQTFKAADKSSPFNYALDFKTADIKANHRYSVRATIMVDGKLRFTTDTNYAVITDQEKTMTQDLLLKGV
RQ
>Mature_162_residues
MKKSLLIALSVVTSVVMVGCNSTEKTAKAPVASEVAVQVDTTQVEEPQAVVTQTVTGSVGYRERIALPPTAVITVTLADV
SLADAPSKTISEQTFKAADKSSPFNYALDFKTADIKANHRYSVRATIMVDGKLRFTTDTNYAVITDQEKTMTQDLLLKGV
RQ

Specific function: Unknown

COG id: COG3126

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786658, Length=114, Percent_Identity=45.6140350877193, Blast_Score=94, Evalue=6e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17470; Mature: 17470

Theoretical pI: Translated: 8.44; Mature: 8.44

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKSLLIALSVVTSVVMVGCNSTEKTAKAPVASEVAVQVDTTQVEEPQAVVTQTVTGSVG
CCCHHHHHHHHHHHHHEECCCCCCCHHCCCCCCEEEEEEECCCCCCCCEEEEEEECCCCC
YRERIALPPTAVITVTLADVSLADAPSKTISEQTFKAADKSSPFNYALDFKTADIKANHR
CCEEECCCCCEEEEEEEECEEECCCCCCHHHHHHHHHCCCCCCCEEEEEEEEECEECCCE
YSVRATIMVDGKLRFTTDTNYAVITDQEKTMTQDLLLKGVRQ
EEEEEEEEECCEEEEEECCCEEEEECCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKKSLLIALSVVTSVVMVGCNSTEKTAKAPVASEVAVQVDTTQVEEPQAVVTQTVTGSVG
CCCHHHHHHHHHHHHHEECCCCCCCHHCCCCCCEEEEEEECCCCCCCCEEEEEEECCCCC
YRERIALPPTAVITVTLADVSLADAPSKTISEQTFKAADKSSPFNYALDFKTADIKANHR
CCEEECCCCCEEEEEEEECEEECCCCCCHHHHHHHHHCCCCCCCEEEEEEEEECEECCCE
YSVRATIMVDGKLRFTTDTNYAVITDQEKTMTQDLLLKGVRQ
EEEEEEEEECCEEEEEECCCEEEEECCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]