Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is ybgT [C]

Identifier: 209695359

GI number: 209695359

Start: 2028327

End: 2028434

Strand: Direct

Name: ybgT [C]

Synonym: VSAL_I1892

Alternate gene names: 209695359

Gene position: 2028327-2028434 (Clockwise)

Preceding gene: 209695358

Following gene: 209695360

Centisome position: 61.0

GC content: 37.96

Gene sequence:

>108_bases
ATGTGGTATTTTGCTTGGATTCTAGGTGTGCTACTAGCATGCTCATTTGCAATCATTAATGCTCTTTGGTTAGAGCACTC
AGAAATGATGGATAAAGACAGTGAGTAA

Upstream 100 bases:

>100_bases
TCCTTGCTTACACAGCATGGACGTATTATAAAATGTTTGGTCGTATTGATACTAAATTTGTTGAAGACAACAAAAATTCG
CTTTATTAAGGAGTATAACA

Downstream 100 bases:

>100_bases
TATCGCTGGGAAAATAGACAGTGTTCATAGCCCAATAAATAATATCATCGTTAAGTTGATATTGATTGGAGCCGCACTTT
TCCACATGGGAATGCTTATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 35; Mature: 35

Protein sequence:

>35_residues
MWYFAWILGVLLACSFAIINALWLEHSEMMDKDSE

Sequences:

>Translated_35_residues
MWYFAWILGVLLACSFAIINALWLEHSEMMDKDSE
>Mature_35_residues
MWYFAWILGVLLACSFAIINALWLEHSEMMDKDSE

Specific function: Unknown

COG id: COG4890

COG function: function code S; Predicted outer membrane lipoprotein

Gene ontology:

Cell location: Transmembrane, Inner membrane [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 4135; Mature: 4135

Theoretical pI: Translated: 3.95; Mature: 3.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
8.6 %Met     (Translated Protein)
11.4 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
8.6 %Met     (Mature Protein)
11.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWYFAWILGVLLACSFAIINALWLEHSEMMDKDSE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MWYFAWILGVLLACSFAIINALWLEHSEMMDKDSE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA