Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is 209695283

Identifier: 209695283

GI number: 209695283

Start: 1931745

End: 1932872

Strand: Direct

Name: 209695283

Synonym: VSAL_I1808

Alternate gene names: NA

Gene position: 1931745-1932872 (Clockwise)

Preceding gene: 209695282

Following gene: 209695284

Centisome position: 58.09

GC content: 42.29

Gene sequence:

>1128_bases
ATGACAAATACAAATATCCAACTTATTTCAACAATTAGCGAAGACAATAAGCTCACGCTTTCCCTACAAGACATCGACAT
GCCACAACCTAATGCCGATGAAGTCGTTATTCGCATTGAAGCTGCCCCATTAAACCCATCTGATTTAGGCGTTTTATTCA
GTGCCGCTGATATGACTACCGCAGAGCAATCAGGCACAACTCAACATCCTGTGATTACCGCTGATGTTCCTGCTCAGTTT
ATGCCATCGCTTGCAAAGCGTGTGGGTAAAGCAATTCCTGTTGGGAATGAAGGCGCAGGAACCGTTATAGCCGCGGGATC
ATCACCTGCAGCACAAGCGTTAATGGGTAAAACCGTTGCGGTAATTGGCGGCGGAACTTACCGTCAATTTATCTGTGCTA
ATGTGCAAAGCTGCTTAGAATTAAAAGAAGGCACGACAGCGAAAGAAGGCGCATCGTCTTTTGTTAACCCACTTACTGCA
TTAGCTATGGTAGAAACAATGCGTGCCGAAGGCCATAAAGCCATTATTCATGCCGCCGCGGCGTCTAATCTTGGTCAAAT
GTTAAACCGTATTTGTATTGCCGATAACGTCGATTTAATTAACATTGTACGTAAAGAAGAACAAGAAACACTATTACAAG
ATATGGGCGCAAAATACATTGTTAACTCAAGCAGTGAAACTTTCCTTGCTGATTTAACGGCTGCGATTATTGAAACGGGT
GCAACGATTGCGTTTGATCCCATTGGTGGCGGTCAATTAACCAGTGATATTCTTAACTGCATGGAAGTTGCTGCGGCTCG
TGATATGAAAGAACACAGCGTTTATGGTTCTGACACTTTCAAACAAGTGTATATTTATGGCGCATTAAACCGTGGCCCTA
TTACTTTACATCGTAATTTTGGTTTTGCTTGGGGTGTCAATGGATTCTTACTATTCAATGCCTTAGGTAAATTAGGGACG
ACAACAGCAATAGCAATGCGTAAACGTGTTGCAGATGAAATCACCACCACATTTGCTAGTAACTACACACATGAAGTGTC
ATTAGCTGAAGTATTACAATTACAATCATTGGCCGCTTATTCTAAACAAGCGACAGGTGAAAAGTACTTAATTACGCCTC
AGAAATAG

Upstream 100 bases:

>100_bases
CCAATACGAAATGTCTACTTGAATTCAGCTACGAACACACTATGGTCAATGCAGCCACCTTATTGACTCAACAAATTTAC
TTCTTTGCCGGAGAAACCTC

Downstream 100 bases:

>100_bases
ACGTAAGCGTGCGGGGAACTACACCTAACAAATAAAATTCATTATGCGTATCTTACGATCTTTCATTTAACGAGAACGTA
ATTATGCAAAAAGATAAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: Alcohol Dehydrogenase GroES Domain Protein; Alcohol Dehydrogenase; Alcohol Dehydrogenase GroES-Like Protein; NADPHQuinone Reductase; Alcohol Dehydrogenase GroES-Like Domain Family; Zn-Dependent; Alcohol Dehydrogenase GroES Domain-Containing Protein; NADH Oxidoreductas; Zn-Dependent Alcohol Dehydrogenase; Trans-2-Enoyl-CoA Reductase; Alcohol Dehydrogenase-Like Protein; Zn-Dependent Oxidoreductase; NADH Oxidoreductase-Like

Number of amino acids: Translated: 375; Mature: 374

Protein sequence:

>375_residues
MTNTNIQLISTISEDNKLTLSLQDIDMPQPNADEVVIRIEAAPLNPSDLGVLFSAADMTTAEQSGTTQHPVITADVPAQF
MPSLAKRVGKAIPVGNEGAGTVIAAGSSPAAQALMGKTVAVIGGGTYRQFICANVQSCLELKEGTTAKEGASSFVNPLTA
LAMVETMRAEGHKAIIHAAAASNLGQMLNRICIADNVDLINIVRKEEQETLLQDMGAKYIVNSSSETFLADLTAAIIETG
ATIAFDPIGGGQLTSDILNCMEVAAARDMKEHSVYGSDTFKQVYIYGALNRGPITLHRNFGFAWGVNGFLLFNALGKLGT
TTAIAMRKRVADEITTTFASNYTHEVSLAEVLQLQSLAAYSKQATGEKYLITPQK

Sequences:

>Translated_375_residues
MTNTNIQLISTISEDNKLTLSLQDIDMPQPNADEVVIRIEAAPLNPSDLGVLFSAADMTTAEQSGTTQHPVITADVPAQF
MPSLAKRVGKAIPVGNEGAGTVIAAGSSPAAQALMGKTVAVIGGGTYRQFICANVQSCLELKEGTTAKEGASSFVNPLTA
LAMVETMRAEGHKAIIHAAAASNLGQMLNRICIADNVDLINIVRKEEQETLLQDMGAKYIVNSSSETFLADLTAAIIETG
ATIAFDPIGGGQLTSDILNCMEVAAARDMKEHSVYGSDTFKQVYIYGALNRGPITLHRNFGFAWGVNGFLLFNALGKLGT
TTAIAMRKRVADEITTTFASNYTHEVSLAEVLQLQSLAAYSKQATGEKYLITPQK
>Mature_374_residues
TNTNIQLISTISEDNKLTLSLQDIDMPQPNADEVVIRIEAAPLNPSDLGVLFSAADMTTAEQSGTTQHPVITADVPAQFM
PSLAKRVGKAIPVGNEGAGTVIAAGSSPAAQALMGKTVAVIGGGTYRQFICANVQSCLELKEGTTAKEGASSFVNPLTAL
AMVETMRAEGHKAIIHAAAASNLGQMLNRICIADNVDLINIVRKEEQETLLQDMGAKYIVNSSSETFLADLTAAIIETGA
TIAFDPIGGGQLTSDILNCMEVAAARDMKEHSVYGSDTFKQVYIYGALNRGPITLHRNFGFAWGVNGFLLFNALGKLGTT
TAIAMRKRVADEITTTFASNYTHEVSLAEVLQLQSLAAYSKQATGEKYLITPQK

Specific function: Unknown

COG id: COG0604

COG function: function code CR; NADPH:quinone reductase and related Zn-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39804; Mature: 39673

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNTNIQLISTISEDNKLTLSLQDIDMPQPNADEVVIRIEAAPLNPSDLGVLFSAADMTT
CCCCCEEEEEEECCCCEEEEEEEECCCCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCC
AEQSGTTQHPVITADVPAQFMPSLAKRVGKAIPVGNEGAGTVIAAGSSPAAQALMGKTVA
HHCCCCCCCCEEEECCCHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCHHHHHHHCCEEE
VIGGGTYRQFICANVQSCLELKEGTTAKEGASSFVNPLTALAMVETMRAEGHKAIIHAAA
EEECCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHH
ASNLGQMLNRICIADNVDLINIVRKEEQETLLQDMGAKYIVNSSSETFLADLTAAIIETG
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHCC
ATIAFDPIGGGQLTSDILNCMEVAAARDMKEHSVYGSDTFKQVYIYGALNRGPITLHRNF
CEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCEEEEECC
GFAWGVNGFLLFNALGKLGTTTAIAMRKRVADEITTTFASNYTHEVSLAEVLQLQSLAAY
CEEECCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
SKQATGEKYLITPQK
HHHCCCCEEEECCCC
>Mature Secondary Structure 
TNTNIQLISTISEDNKLTLSLQDIDMPQPNADEVVIRIEAAPLNPSDLGVLFSAADMTT
CCCCEEEEEEECCCCEEEEEEEECCCCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCC
AEQSGTTQHPVITADVPAQFMPSLAKRVGKAIPVGNEGAGTVIAAGSSPAAQALMGKTVA
HHCCCCCCCCEEEECCCHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCHHHHHHHCCEEE
VIGGGTYRQFICANVQSCLELKEGTTAKEGASSFVNPLTALAMVETMRAEGHKAIIHAAA
EEECCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHH
ASNLGQMLNRICIADNVDLINIVRKEEQETLLQDMGAKYIVNSSSETFLADLTAAIIETG
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHCC
ATIAFDPIGGGQLTSDILNCMEVAAARDMKEHSVYGSDTFKQVYIYGALNRGPITLHRNF
CEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCEEEEECC
GFAWGVNGFLLFNALGKLGTTTAIAMRKRVADEITTTFASNYTHEVSLAEVLQLQSLAAY
CEEECCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
SKQATGEKYLITPQK
HHHCCCCEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA