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The map label for this gene is ompA [H]

Identifier: 209695194

GI number: 209695194

Start: 1799568

End: 1800635

Strand: Direct

Name: ompA [H]

Synonym: VSAL_I1701

Alternate gene names: 209695194

Gene position: 1799568-1800635 (Clockwise)

Preceding gene: 209695191

Following gene: 209695196

Centisome position: 54.12

GC content: 36.52

Gene sequence:

>1068_bases
ATGTCATATCTTCATCTATGGATTACATTCTTATTTATTTCATTCTCTCAATGTTCTTATGCAACAGCAGAATTGCCTAC
ATCAACCCAGTCAAATATCAATACTGAATTTTCTAATTCTACCTTATTGCCCGATAATGGCGATTATTGGTATGTTGGTA
CCAAATTAGGTTTAAGTGTATACCAATATGGTTGTGAGGAATGGTCAATTGATTGTGATAGAACAGATTTAGGCGGAGGT
TTCTTTGTTGGCTATCAAATCAACGAAAGCTGGGGAATTGAGCTAGGTAAGACTTTCTTAGGGGCTGCTAAAGCAGAGTA
TTTTTCAAGAAAAGTAACAGGAGATATGGAGACAATTGATCTTTTCGGTAAGTATACCTACGGTCTGACTGATCGTTTTG
GTTTTTTTGGCAAAGCTGGTCTCGCAAACTGGAACGGGAAAACAAAATCTGATTATGTTGAGACAACTACGTTTGGGCAT
GATTTATCTGTTGGATTTGGAGCTCAATATGCCCTAAATAAACGTTGGCTTACTCAGCTTGAATATCAATATATAAACAG
CATTGGGGATGATACTGTCGGTGAATCTGATTACCACCTTATGAGTATAGGTATCATTTATCGATTTGGTTTTCATGAGC
TAAAACAACCTTTCTCATGCCCGATCCCTAATGAACGTCAAATTATTACCGCTTATGTAGATGATGAGCTTTTTGATAGC
AACAGCACAACCATCACTAAACCAGAACTACTTGATCCTTTTATTGCTCGACTTCACTATTACTCTGAGTCAACACTTTC
TATTATTGGTCATACTGATGCTATCGGTTCCGAGGCTTATAACCAATCATTATCAGAGAAAAGAGCGGAATCAGTGGCTA
AATATTTCATAAAATCTGGAATATCAAATAACCGTATATCCACCCAAGGCCGCGGTGAAAAAGACCCCATTGCTCCCAAT
AATACACAAAATGGTCGTTATTTAAATCGCCGAGTTGAACTACGATCTAATTCATTTCTTTATATCCCTAATAAAAAATT
AATTACTCAACATCAAGAGAATAACTAA

Upstream 100 bases:

>100_bases
CCTGGCAAAATAATGGCGGTACGATGTATATTCCGAAACAAATATACATACTTTGTTACATATAAGGCATATCTAACAAT
TAACCTAGGCGTAATTAACC

Downstream 100 bases:

>100_bases
TGAATAAATTATTTATATTATTACTACCTATTTTTCTTTTTGGTTGTAATGACAATGGTTTTCCCACAGATCCCACACAT
GGTAATTTACCCCCTGAAAT

Product: outer membrane protein, OmpA family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 355; Mature: 354

Protein sequence:

>355_residues
MSYLHLWITFLFISFSQCSYATAELPTSTQSNINTEFSNSTLLPDNGDYWYVGTKLGLSVYQYGCEEWSIDCDRTDLGGG
FFVGYQINESWGIELGKTFLGAAKAEYFSRKVTGDMETIDLFGKYTYGLTDRFGFFGKAGLANWNGKTKSDYVETTTFGH
DLSVGFGAQYALNKRWLTQLEYQYINSIGDDTVGESDYHLMSIGIIYRFGFHELKQPFSCPIPNERQIITAYVDDELFDS
NSTTITKPELLDPFIARLHYYSESTLSIIGHTDAIGSEAYNQSLSEKRAESVAKYFIKSGISNNRISTQGRGEKDPIAPN
NTQNGRYLNRRVELRSNSFLYIPNKKLITQHQENN

Sequences:

>Translated_355_residues
MSYLHLWITFLFISFSQCSYATAELPTSTQSNINTEFSNSTLLPDNGDYWYVGTKLGLSVYQYGCEEWSIDCDRTDLGGG
FFVGYQINESWGIELGKTFLGAAKAEYFSRKVTGDMETIDLFGKYTYGLTDRFGFFGKAGLANWNGKTKSDYVETTTFGH
DLSVGFGAQYALNKRWLTQLEYQYINSIGDDTVGESDYHLMSIGIIYRFGFHELKQPFSCPIPNERQIITAYVDDELFDS
NSTTITKPELLDPFIARLHYYSESTLSIIGHTDAIGSEAYNQSLSEKRAESVAKYFIKSGISNNRISTQGRGEKDPIAPN
NTQNGRYLNRRVELRSNSFLYIPNKKLITQHQENN
>Mature_354_residues
SYLHLWITFLFISFSQCSYATAELPTSTQSNINTEFSNSTLLPDNGDYWYVGTKLGLSVYQYGCEEWSIDCDRTDLGGGF
FVGYQINESWGIELGKTFLGAAKAEYFSRKVTGDMETIDLFGKYTYGLTDRFGFFGKAGLANWNGKTKSDYVETTTFGHD
LSVGFGAQYALNKRWLTQLEYQYINSIGDDTVGESDYHLMSIGIIYRFGFHELKQPFSCPIPNERQIITAYVDDELFDSN
STTITKPELLDPFIARLHYYSESTLSIIGHTDAIGSEAYNQSLSEKRAESVAKYFIKSGISNNRISTQGRGEKDPIAPNN
TQNGRYLNRRVELRSNSFLYIPNKKLITQHQENN

Specific function: Required for the action of colicins K and L and for the stabilization of mating aggregates in conjugation. Serves as a receptor for a number of T-even like phages. Also acts as a porin with low permeability that allows slow penetration of small solutes [H

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI1787191, Length=324, Percent_Identity=32.4074074074074, Blast_Score=135, Evalue=5e-33,
Organism=Escherichia coli, GI48994946, Length=110, Percent_Identity=40, Blast_Score=77, Evalue=2e-15,

Paralogues:

None

Copy number: 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2300 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 3380 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1480 Molecules/Cell In: Growth Phase, Mi

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011250
- InterPro:   IPR006664
- InterPro:   IPR002368
- InterPro:   IPR006690
- InterPro:   IPR000498
- InterPro:   IPR006665 [H]

Pfam domain/function: PF00691 OmpA; PF01389 OmpA_membrane [H]

EC number: NA

Molecular weight: Translated: 40265; Mature: 40134

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: PS01068 OMPA_1 ; PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYLHLWITFLFISFSQCSYATAELPTSTQSNINTEFSNSTLLPDNGDYWYVGTKLGLSV
CCHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCEECCCCCCEEEEEHHHHHHH
YQYGCEEWSIDCDRTDLGGGFFVGYQINESWGIELGKTFLGAAKAEYFSRKVTGDMETID
HHHCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHH
LFGKYTYGLTDRFGFFGKAGLANWNGKTKSDYVETTTFGHDLSVGFGAQYALNKRWLTQL
HHHHHCCCCCHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHCHHHHHHH
EYQYINSIGDDTVGESDYHLMSIGIIYRFGFHELKQPFSCPIPNERQIITAYVDDELFDS
HHHHHHHCCCCCCCCCCCEEEEEHHHHHHCHHHHCCCCCCCCCCCCEEEEEEECCHHCCC
NSTTITKPELLDPFIARLHYYSESTLSIIGHTDAIGSEAYNQSLSEKRAESVAKYFIKSG
CCCEECCHHHHHHHHHHHHHCCCCEEEEEECCCHHCHHHHHHHHHHHHHHHHHHHHHHCC
ISNNRISTQGRGEKDPIAPNNTQNGRYLNRRVELRSNSFLYIPNKKLITQHQENN
CCCCEECCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCEEEECCHHHCCCCCCCC
>Mature Secondary Structure 
SYLHLWITFLFISFSQCSYATAELPTSTQSNINTEFSNSTLLPDNGDYWYVGTKLGLSV
CHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCEECCCCCCEEEEEHHHHHHH
YQYGCEEWSIDCDRTDLGGGFFVGYQINESWGIELGKTFLGAAKAEYFSRKVTGDMETID
HHHCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHH
LFGKYTYGLTDRFGFFGKAGLANWNGKTKSDYVETTTFGHDLSVGFGAQYALNKRWLTQL
HHHHHCCCCCHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHCHHHHHHH
EYQYINSIGDDTVGESDYHLMSIGIIYRFGFHELKQPFSCPIPNERQIITAYVDDELFDS
HHHHHHHCCCCCCCCCCCEEEEEHHHHHHCHHHHCCCCCCCCCCCCEEEEEEECCHHCCC
NSTTITKPELLDPFIARLHYYSESTLSIIGHTDAIGSEAYNQSLSEKRAESVAKYFIKSG
CCCEECCHHHHHHHHHHHHHCCCCEEEEEECCCHHCHHHHHHHHHHHHHHHHHHHHHHCC
ISNNRISTQGRGEKDPIAPNNTQNGRYLNRRVELRSNSFLYIPNKKLITQHQENN
CCCCEECCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCEEEECCHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11586360; 12142430 [H]