Click here to switch to the map view.

The map label for this gene is tusE [H]

Identifier: 209695196

GI number: 209695196

Start: 1804059

End: 1804385

Strand: Direct

Name: tusE [H]

Synonym: VSAL_I1705

Alternate gene names: 209695196

Gene position: 1804059-1804385 (Clockwise)

Preceding gene: 209695194

Following gene: 209695198

Centisome position: 54.25

GC content: 41.28

Gene sequence:

>327_bases
ATGGAATTTAACGGTAAGCACATTGAACGCGATGCTCAAGGGTATTTAATGAATCACACTGATTGGAGTGAAGAGTTAGT
GCCATTTCTCGCACAGGAAGAAAACATTGAACTGACTGATGCACATTTGGAAGTCGTTCGCTTTGTTCGTGCATTTTATG
AAGAATTCAAAACTTCACCCGCGGTTCGCATGCTTGTTAAAGCAATGGAAAAAGAACACGGCCCAGAAAAAGGCAACAGT
AAGTATTTATTCCAGTTATTCAAATTAGGTCCGGCGAAGCAAGCAACAAAACTGGCTGGCTTACCAAAGCCTGCGAAATG
CTTATAA

Upstream 100 bases:

>100_bases
GCTTTACCACCTGTATCACACCTCAATATTAATCTGTTACTGCCGCTATTTTTTTGATAAAATTAGTGGCGGTATTCTAT
TTTTAAATAAGATAAGTTGT

Downstream 100 bases:

>100_bases
CAATAAATTCAGGCACGATTAGTACATTTTGAAATCGCTTAATTCTTGCCATTCTACAGCAGCTTTCTCGATTGAATCCA
CTCTTGAAAGCTGAGATCCT

Product: hypothetical protein

Products: NA

Alternate protein names: tRNA 2-thiouridine synthesizing protein E [H]

Number of amino acids: Translated: 108; Mature: 108

Protein sequence:

>108_residues
MEFNGKHIERDAQGYLMNHTDWSEELVPFLAQEENIELTDAHLEVVRFVRAFYEEFKTSPAVRMLVKAMEKEHGPEKGNS
KYLFQLFKLGPAKQATKLAGLPKPAKCL

Sequences:

>Translated_108_residues
MEFNGKHIERDAQGYLMNHTDWSEELVPFLAQEENIELTDAHLEVVRFVRAFYEEFKTSPAVRMLVKAMEKEHGPEKGNS
KYLFQLFKLGPAKQATKLAGLPKPAKCL
>Mature_108_residues
MEFNGKHIERDAQGYLMNHTDWSEELVPFLAQEENIELTDAHLEVVRFVRAFYEEFKTSPAVRMLVKAMEKEHGPEKGNS
KYLFQLFKLGPAKQATKLAGLPKPAKCL

Specific function: Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Could accept sulfur from tusD [H]

COG id: COG2920

COG function: function code P; Dissimilatory sulfite reductase (desulfoviridin), gamma subunit

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dsrC/tusE family [H]

Homologues:

Organism=Escherichia coli, GI87081811, Length=106, Percent_Identity=62.2641509433962, Blast_Score=139, Evalue=3e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007453 [H]

Pfam domain/function: PF04358 DsrC [H]

EC number: NA

Molecular weight: Translated: 12408; Mature: 12408

Theoretical pI: Translated: 6.96; Mature: 6.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEFNGKHIERDAQGYLMNHTDWSEELVPFLAQEENIELTDAHLEVVRFVRAFYEEFKTSP
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCH
AVRMLVKAMEKEHGPEKGNSKYLFQLFKLGPAKQATKLAGLPKPAKCL
HHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MEFNGKHIERDAQGYLMNHTDWSEELVPFLAQEENIELTDAHLEVVRFVRAFYEEFKTSP
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCH
AVRMLVKAMEKEHGPEKGNSKYLFQLFKLGPAKQATKLAGLPKPAKCL
HHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA