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The map label for this gene is yccF [H]

Identifier: 209694901

GI number: 209694901

Start: 1494709

End: 1495161

Strand: Direct

Name: yccF [H]

Synonym: VSAL_I1374

Alternate gene names: 209694901

Gene position: 1494709-1495161 (Clockwise)

Preceding gene: 209694900

Following gene: 209694902

Centisome position: 44.95

GC content: 40.18

Gene sequence:

>453_bases
ATGAGCGCAATTGGTAATTTAATCTGGTTTCTGTTTGGTGGCGTGTTTATGGGTTTAGCATGGTGCTTTTTTGGGCTTAT
CGCTTTTATCAGCATTATTGGAATCCCTTGGGGAAGAGCGTGTTTTGTTATCGCGGGCTTTTCATTTTTTCCTTTCGGTA
AAGAAGCGATCCGTCGTGATGATTTAACGAAATCTGAAGATATAGGAACGGGTAGCCTTGGTTTTTTAGGTAATGTTCTG
TGGTTTATTTTTGCTGGCTTCTGGTTGGCGATTGGTCATGTAATATCGGCAATTGCTTGCTTTGTTACTATCATTGGTAT
TCCATTTGCGATACAGCATTTAAAACTTGCTGCTATTTCAATTGCACCGATCGGTCAGACTATCGTTGATAAAGAAGTGG
CTTCTGTAGTTCGCAATGCGAATGCAAAAATAGAAGCGGATAAGTGGAAGTAA

Upstream 100 bases:

>100_bases
CATGTGCTAAATGTGGCGCGGATGATTAATCGTTTTATCTATGTATAATCTGGCATTGTATGTTTTATCGGTATCTCAAA
TTTATAAGTAAGGAAATAAA

Downstream 100 bases:

>100_bases
TTCTGTTCTAAAAAAGGACATCAAGTAATAGGTATGTACTTATTTTATGTCCTTTTTATTCCTACCTCTGTTCTTCATTA
TCGCCCGTTATTTATTTAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 150; Mature: 149

Protein sequence:

>150_residues
MSAIGNLIWFLFGGVFMGLAWCFFGLIAFISIIGIPWGRACFVIAGFSFFPFGKEAIRRDDLTKSEDIGTGSLGFLGNVL
WFIFAGFWLAIGHVISAIACFVTIIGIPFAIQHLKLAAISIAPIGQTIVDKEVASVVRNANAKIEADKWK

Sequences:

>Translated_150_residues
MSAIGNLIWFLFGGVFMGLAWCFFGLIAFISIIGIPWGRACFVIAGFSFFPFGKEAIRRDDLTKSEDIGTGSLGFLGNVL
WFIFAGFWLAIGHVISAIACFVTIIGIPFAIQHLKLAAISIAPIGQTIVDKEVASVVRNANAKIEADKWK
>Mature_149_residues
SAIGNLIWFLFGGVFMGLAWCFFGLIAFISIIGIPWGRACFVIAGFSFFPFGKEAIRRDDLTKSEDIGTGSLGFLGNVLW
FIFAGFWLAIGHVISAIACFVTIIGIPFAIQHLKLAAISIAPIGQTIVDKEVASVVRNANAKIEADKWK

Specific function: Unknown

COG id: COG3304

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787195, Length=133, Percent_Identity=34.5864661654135, Blast_Score=90, Evalue=6e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005185 [H]

Pfam domain/function: PF03733 DUF307 [H]

EC number: NA

Molecular weight: Translated: 16288; Mature: 16157

Theoretical pI: Translated: 8.52; Mature: 8.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAIGNLIWFLFGGVFMGLAWCFFGLIAFISIIGIPWGRACFVIAGFSFFPFGKEAIRRD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCHHHHHHH
DLTKSEDIGTGSLGFLGNVLWFIFAGFWLAIGHVISAIACFVTIIGIPFAIQHLKLAAIS
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAPIGQTIVDKEVASVVRNANAKIEADKWK
HHHCCHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
SAIGNLIWFLFGGVFMGLAWCFFGLIAFISIIGIPWGRACFVIAGFSFFPFGKEAIRRD
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCHHHHHHH
DLTKSEDIGTGSLGFLGNVLWFIFAGFWLAIGHVISAIACFVTIIGIPFAIQHLKLAAIS
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAPIGQTIVDKEVASVVRNANAKIEADKWK
HHHCCHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 2542273; 7984428 [H]