Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is 209694900

Identifier: 209694900

GI number: 209694900

Start: 1494476

End: 1494637

Strand: Direct

Name: 209694900

Synonym: VSAL_I1373

Alternate gene names: NA

Gene position: 1494476-1494637 (Clockwise)

Preceding gene: 209694893

Following gene: 209694901

Centisome position: 44.94

GC content: 40.74

Gene sequence:

>162_bases
ATGAGAAAACGTTACACGACGGAAGGCGATACAACGTCTAAAAAAGAGAAAGAAGCCTATCCAATACTCGCATTGTGTAA
AAATTGCGTAGGCAGTTATACGGTTATTAATGAGGGTGAACGAACTCATGTTGCATGTGCTAAATGTGGCGCGGATGATT
AA

Upstream 100 bases:

>100_bases
TATTGTGTGCTTTATGATATTATGGTTAATCGGTGTTGTTCAGCACCAAAAGTAGGATTAATGTAAAACTAAACTCTTCA
TCGCTAATTAAGGCACCACA

Downstream 100 bases:

>100_bases
TCGTTTTATCTATGTATAATCTGGCATTGTATGTTTTATCGGTATCTCAAATTTATAAGTAAGGAAATAAAATGAGCGCA
ATTGGTAATTTAATCTGGTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 53; Mature: 53

Protein sequence:

>53_residues
MRKRYTTEGDTTSKKEKEAYPILALCKNCVGSYTVINEGERTHVACAKCGADD

Sequences:

>Translated_53_residues
MRKRYTTEGDTTSKKEKEAYPILALCKNCVGSYTVINEGERTHVACAKCGADD
>Mature_53_residues
MRKRYTTEGDTTSKKEKEAYPILALCKNCVGSYTVINEGERTHVACAKCGADD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 5857; Mature: 5857

Theoretical pI: Translated: 7.92; Mature: 7.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

7.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
9.4 %Cys+Met (Translated Protein)
7.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
9.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKRYTTEGDTTSKKEKEAYPILALCKNCVGSYTVINEGERTHVACAKCGADD
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEECCCCCCEEEEECCCCCC
>Mature Secondary Structure
MRKRYTTEGDTTSKKEKEAYPILALCKNCVGSYTVINEGERTHVACAKCGADD
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEECCCCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA