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The map label for this gene is ybfF [C]

Identifier: 209694416

GI number: 209694416

Start: 931522

End: 932298

Strand: Reverse

Name: ybfF [C]

Synonym: VSAL_I0837

Alternate gene names: 209694416

Gene position: 932298-931522 (Counterclockwise)

Preceding gene: 209694420

Following gene: 209694415

Centisome position: 28.04

GC content: 36.94

Gene sequence:

>777_bases
ATGAAGCGACTTAATTACAAACAACAAGGAAACGGGGATCCATTGATCCTTATTCATGGTCTATTCGGAAGCTTAGATAA
CCTAGGATTGATAGCACGTCAATTTGAAAGTAGCTATCAAGTGATCAGTGTTGATCTTCGTAATCACGGACTTTCTTTTC
ACTCTAATGAACATAATTATGACTTACTTGCGACTGATGTAATTGAATTAATGGATCATCTTTCCATTACGTCTGCTCAC
ATTATTGGGCATTCAATGGGAGGCAAAGTAGCAATGGCTATTGCAGGATCTTCCCCAGAAAAAATTAATTCTCTTTCTAT
CTTAGACATGGCCCCAGTTTCATACTCAGAACGAAAACATGATGCTGTTTTTACTGGATTACAACGTGTAATAACAACGC
CACCAACGTCTCGAAAAGAAGCAGATGTCTTATTATCAACCTCAATTATTGACCCCGGAGTTAGACAATTTTTAAGTAAG
TCATTGCATAAAATAAATAATACGTTAACTTTTAGATTTAACGTGTCGACGTTATTTAATCAGTATTCTGACATTATTGG
TTGGCATGACATCACTCCTTTTTCAGGCCATGTCTTATTTATAAAAGGAGAAAATTCCGATTATATTCTGCCTGGGCATA
GAGCCAGCATCATGGCTCAATTCCCTACTGCAAAAGCGCATGTAGTGAATGGAACCGGGCATTGGTTGCATGCAGAAAAA
CCAGAGACGATTTATCGCATAATTAATCGCTTTATAGAAAATAGTCGTAAAAGATAA

Upstream 100 bases:

>100_bases
TCTTCATTATATGGTTCGTATTCTTAATCTATTTATGAAGGCACAATTATACCTTGTATAATCGTGATACTCTACGACAA
ACCTAACACAACATAAAAAA

Downstream 100 bases:

>100_bases
TCAATACCAACCAGCGCAAAGCTATGGTATAGTTTTGCGTCATTATATGATTAGTTTAGCAAACCTGCATAATGTAAGGG
TGAATCATGCTGTATGAACA

Product: esterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 258; Mature: 258

Protein sequence:

>258_residues
MKRLNYKQQGNGDPLILIHGLFGSLDNLGLIARQFESSYQVISVDLRNHGLSFHSNEHNYDLLATDVIELMDHLSITSAH
IIGHSMGGKVAMAIAGSSPEKINSLSILDMAPVSYSERKHDAVFTGLQRVITTPPTSRKEADVLLSTSIIDPGVRQFLSK
SLHKINNTLTFRFNVSTLFNQYSDIIGWHDITPFSGHVLFIKGENSDYILPGHRASIMAQFPTAKAHVVNGTGHWLHAEK
PETIYRIINRFIENSRKR

Sequences:

>Translated_258_residues
MKRLNYKQQGNGDPLILIHGLFGSLDNLGLIARQFESSYQVISVDLRNHGLSFHSNEHNYDLLATDVIELMDHLSITSAH
IIGHSMGGKVAMAIAGSSPEKINSLSILDMAPVSYSERKHDAVFTGLQRVITTPPTSRKEADVLLSTSIIDPGVRQFLSK
SLHKINNTLTFRFNVSTLFNQYSDIIGWHDITPFSGHVLFIKGENSDYILPGHRASIMAQFPTAKAHVVNGTGHWLHAEK
PETIYRIINRFIENSRKR
>Mature_258_residues
MKRLNYKQQGNGDPLILIHGLFGSLDNLGLIARQFESSYQVISVDLRNHGLSFHSNEHNYDLLATDVIELMDHLSITSAH
IIGHSMGGKVAMAIAGSSPEKINSLSILDMAPVSYSERKHDAVFTGLQRVITTPPTSRKEADVLLSTSIIDPGVRQFLSK
SLHKINNTLTFRFNVSTLFNQYSDIIGWHDITPFSGHVLFIKGENSDYILPGHRASIMAQFPTAKAHVVNGTGHWLHAEK
PETIYRIINRFIENSRKR

Specific function: Unknown

COG id: COG0596

COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dmpD/todF/xylF esterase family [H]

Homologues:

Organism=Homo sapiens, GI23200012, Length=246, Percent_Identity=34.1463414634146, Blast_Score=146, Evalue=2e-35,
Organism=Homo sapiens, GI23200008, Length=246, Percent_Identity=34.1463414634146, Blast_Score=146, Evalue=2e-35,
Organism=Homo sapiens, GI223941839, Length=241, Percent_Identity=28.2157676348548, Blast_Score=105, Evalue=3e-23,
Organism=Escherichia coli, GI1786902, Length=248, Percent_Identity=41.5322580645161, Blast_Score=218, Evalue=4e-58,
Organism=Caenorhabditis elegans, GI17508535, Length=254, Percent_Identity=29.5275590551181, Blast_Score=126, Evalue=1e-29,
Organism=Caenorhabditis elegans, GI17507063, Length=257, Percent_Identity=27.2373540856031, Blast_Score=93, Evalue=2e-19,
Organism=Saccharomyces cerevisiae, GI6321468, Length=265, Percent_Identity=31.6981132075472, Blast_Score=95, Evalue=1e-20,
Organism=Drosophila melanogaster, GI24640348, Length=255, Percent_Identity=30.1960784313725, Blast_Score=107, Evalue=1e-23,
Organism=Drosophila melanogaster, GI24646055, Length=275, Percent_Identity=24.7272727272727, Blast_Score=86, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073
- InterPro:   IPR012908 [H]

Pfam domain/function: PF00561 Abhydrolase_1; PF07819 PGAP1 [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 28855; Mature: 28855

Theoretical pI: Translated: 9.25; Mature: 9.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRLNYKQQGNGDPLILIHGLFGSLDNLGLIARQFESSYQVISVDLRNHGLSFHSNEHNY
CCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCEEEEEEECCCCCEECCCCCCC
DLLATDVIELMDHLSITSAHIIGHSMGGKVAMAIAGSSPEKINSLSILDMAPVSYSERKH
CHHHHHHHHHHHHHCHHHHHHEEECCCCEEEEEEECCCCHHHCCEEEEEECCCCCCCHHH
DAVFTGLQRVITTPPTSRKEADVLLSTSIIDPGVRQFLSKSLHKINNTLTFRFNVSTLFN
HHHHHHHHHHHCCCCCCCCCCCEEEEEHHCCHHHHHHHHHHHHHHCCEEEEEEEHHHHHH
QYSDIIGWHDITPFSGHVLFIKGENSDYILPGHRASIMAQFPTAKAHVVNGTGHWLHAEK
HHHHHCCCCCCCCCCCEEEEEEECCCCEEECCCCCEEEEECCCCEEEEECCCCCEEECCC
PETIYRIINRFIENSRKR
CHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKRLNYKQQGNGDPLILIHGLFGSLDNLGLIARQFESSYQVISVDLRNHGLSFHSNEHNY
CCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCEEEEEEECCCCCEECCCCCCC
DLLATDVIELMDHLSITSAHIIGHSMGGKVAMAIAGSSPEKINSLSILDMAPVSYSERKH
CHHHHHHHHHHHHHCHHHHHHEEECCCCEEEEEEECCCCHHHCCEEEEEECCCCCCCHHH
DAVFTGLQRVITTPPTSRKEADVLLSTSIIDPGVRQFLSKSLHKINNTLTFRFNVSTLFN
HHHHHHHHHHHCCCCCCCCCCCEEEEEHHCCHHHHHHHHHHHHHHCCEEEEEEEHHHHHH
QYSDIIGWHDITPFSGHVLFIKGENSDYILPGHRASIMAQFPTAKAHVVNGTGHWLHAEK
HHHHHCCCCCCCCCCCEEEEEEECCCCEEECCCCCEEEEECCCCEEEEECCCCCEEECCC
PETIYRIINRFIENSRKR
CHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]