Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
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Accession | NC_011312 |
Length | 3,325,165 |
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The map label for this gene is 209694415
Identifier: 209694415
GI number: 209694415
Start: 931214
End: 931435
Strand: Reverse
Name: 209694415
Synonym: VSAL_I0836
Alternate gene names: NA
Gene position: 931435-931214 (Counterclockwise)
Preceding gene: 209694416
Following gene: 209694414
Centisome position: 28.01
GC content: 37.84
Gene sequence:
>222_bases ATGCTGTATGAACATTTTGATCTTATTGAATCTATTGGATTAGATTTATTGTTTGCCTCGATTTTTTTCTTTATCGGTAT GGCAATAAAAGATGTTTTAAAACAGGGGAATGTCCCATCTTTTGGCCGACGTATTGTTTGGCTAGTACTCTTTCTTGGTT GTACTGGTTTTATTGCGAAAGGTCTTATTCAGCTTAGCTGGGAAGGCGCAGGGCTTGGCTAA
Upstream 100 bases:
>100_bases GTCGTAAAAGATAATCAATACCAACCAGCGCAAAGCTATGGTATAGTTTTGCGTCATTATATGATTAGTTTAGCAAACCT GCATAATGTAAGGGTGAATC
Downstream 100 bases:
>100_bases ATTCAACTAATCAAATAACACCAAATTTCATTAATTAGAAAAATACAGGTATTCATCATATGGCAAGTGTAGGACTCTTC TTTGGTAGCGATACAGGTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 73; Mature: 73
Protein sequence:
>73_residues MLYEHFDLIESIGLDLLFASIFFFIGMAIKDVLKQGNVPSFGRRIVWLVLFLGCTGFIAKGLIQLSWEGAGLG
Sequences:
>Translated_73_residues MLYEHFDLIESIGLDLLFASIFFFIGMAIKDVLKQGNVPSFGRRIVWLVLFLGCTGFIAKGLIQLSWEGAGLG >Mature_73_residues MLYEHFDLIESIGLDLLFASIFFFIGMAIKDVLKQGNVPSFGRRIVWLVLFLGCTGFIAKGLIQLSWEGAGLG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8095; Mature: 8095
Theoretical pI: Translated: 5.68; Mature: 5.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLYEHFDLIESIGLDLLFASIFFFIGMAIKDVLKQGNVPSFGRRIVWLVLFLGCTGFIAK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH GLIQLSWEGAGLG HHHHHCCCCCCCC >Mature Secondary Structure MLYEHFDLIESIGLDLLFASIFFFIGMAIKDVLKQGNVPSFGRRIVWLVLFLGCTGFIAK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH GLIQLSWEGAGLG HHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA