Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is 209694347

Identifier: 209694347

GI number: 209694347

Start: 848387

End: 849481

Strand: Reverse

Name: 209694347

Synonym: VSAL_I0759

Alternate gene names: NA

Gene position: 849481-848387 (Counterclockwise)

Preceding gene: 209694348

Following gene: 209694345

Centisome position: 25.55

GC content: 42.47

Gene sequence:

>1095_bases
ATGCAGCGACAAAAGGGACTAAAACTCGTGGCAAAGGCTAGACAGAACAAAGCATTCGACATACTAACGTATTCAGTTGC
ACCCGGTGAAAGAAAGGTCATTGAGATTGAAGCCGCAAAGCTTTATACCCACTCACCTTTATCTATCCCTGTAGAAATCA
TTAATGGCCAGCATGCTGGCCCAATCCTGATGGTCAATGCGGCCATTCATGGTGATGAGCTCAATGGGGTTGAAATTGTT
CGACAGTTAATCAATAACATTGACCCAAAAACCCTAAAAGGCACTTTAATTGCAGTGCCTATTGTTAACGTTTTTGGTTT
CATTCATAAATCTCGTTATCTACCCGATCGCCGAGATTTAAACCGTTGCTTCCCAGGTTCAGAAAAAGGCTCTTTGGCAT
CACGCATGGCAAATACCTTTTTCACCCAAATAGCAAAACGTTGTGATTATATTGTTGACTTGCACACCGGAGCGATTCAT
CGAACAAACTTACCTCAAATTCGTGCCAATCTAAGTAATCCTGAAACGTTACGAATTGCAAAAGCATTCGCAACACCATT
GATTGTAGATTCGCCATTACGAGATGGTTCGTTACGCAGTGAAGCTGAACGTTGCGGTATTCCAGTATTAACATACGAAG
CCGGTGAAGCATTGCGCTTTGAACCGATAGCGATCAATGCTGGATATGTGGGTGTACAACGAGTAATGCAATCTATTGGT
ATGTTAAAAGCCAGTAGAAAGCGCTTACCAACAGCCATTATTGCGAAATCAACTGGCTGGCTTAGAGCAGAAAGCGACGG
TATCTTACGTACTATCGTGACACTCGGTGAGCAAGTTGAAAAAGATCAAGTTCTTGCTTATATCAGTGCGCCACTTGGCC
ACGGTGAGATCGAGATTATCGCACATAAAGGTGGCATCGTTATTGGCCAACAAACATTACCATTAGTTAATGAAGGGGAC
GCTATTTTCAATTTAGCTTACTTTTCTGAAGATGATGAGATGGTCGGTCAAACAGTTGAAACGTACATCGATGAAATGAT
TGATGCCGATACTGATCAACTAACGAATGGGCAGATCACAACATCTACCCTTTGA

Upstream 100 bases:

>100_bases
CCATTAGTTATGGAAGTGAACTCTTCACCTGGCTTAGAAGGCATTGAAGCCGCTACAGGTAAAGACGTTGCTGGTTTAAT
TGTTGATTTTATTGAGAAAA

Downstream 100 bases:

>100_bases
TATTTCGATACCAAAAACAAAAATAAGAGAGGTTCGCCTCTCTTATTTTATCCACAATATTTACCGGCATTACTGAACAC
CAATAATTTCGTATTGTTGT

Product: hypothetical protein

Products: NA

Alternate protein names: Deacylase; Ectoine Utilization Protein EutE; Succinylglutamate Desuccinylase / Aspartoacylase Family; Succinate Dehydrogenase Subunit Sdh; Succinate Dehydrogenase Subunit; Succinylglutamatedesuccinylase/Aspartoacylase; Deacylase-Like; Succinylglutamate Desuccinylase; Serine Protease; Aminoacylase-2/Carboxypeptidase-Z Family Hydrolase; AstE/AspA Family Protein; N-Acetyl Diamonbutyric Acid Acylase

Number of amino acids: Translated: 364; Mature: 364

Protein sequence:

>364_residues
MQRQKGLKLVAKARQNKAFDILTYSVAPGERKVIEIEAAKLYTHSPLSIPVEIINGQHAGPILMVNAAIHGDELNGVEIV
RQLINNIDPKTLKGTLIAVPIVNVFGFIHKSRYLPDRRDLNRCFPGSEKGSLASRMANTFFTQIAKRCDYIVDLHTGAIH
RTNLPQIRANLSNPETLRIAKAFATPLIVDSPLRDGSLRSEAERCGIPVLTYEAGEALRFEPIAINAGYVGVQRVMQSIG
MLKASRKRLPTAIIAKSTGWLRAESDGILRTIVTLGEQVEKDQVLAYISAPLGHGEIEIIAHKGGIVIGQQTLPLVNEGD
AIFNLAYFSEDDEMVGQTVETYIDEMIDADTDQLTNGQITTSTL

Sequences:

>Translated_364_residues
MQRQKGLKLVAKARQNKAFDILTYSVAPGERKVIEIEAAKLYTHSPLSIPVEIINGQHAGPILMVNAAIHGDELNGVEIV
RQLINNIDPKTLKGTLIAVPIVNVFGFIHKSRYLPDRRDLNRCFPGSEKGSLASRMANTFFTQIAKRCDYIVDLHTGAIH
RTNLPQIRANLSNPETLRIAKAFATPLIVDSPLRDGSLRSEAERCGIPVLTYEAGEALRFEPIAINAGYVGVQRVMQSIG
MLKASRKRLPTAIIAKSTGWLRAESDGILRTIVTLGEQVEKDQVLAYISAPLGHGEIEIIAHKGGIVIGQQTLPLVNEGD
AIFNLAYFSEDDEMVGQTVETYIDEMIDADTDQLTNGQITTSTL
>Mature_364_residues
MQRQKGLKLVAKARQNKAFDILTYSVAPGERKVIEIEAAKLYTHSPLSIPVEIINGQHAGPILMVNAAIHGDELNGVEIV
RQLINNIDPKTLKGTLIAVPIVNVFGFIHKSRYLPDRRDLNRCFPGSEKGSLASRMANTFFTQIAKRCDYIVDLHTGAIH
RTNLPQIRANLSNPETLRIAKAFATPLIVDSPLRDGSLRSEAERCGIPVLTYEAGEALRFEPIAINAGYVGVQRVMQSIG
MLKASRKRLPTAIIAKSTGWLRAESDGILRTIVTLGEQVEKDQVLAYISAPLGHGEIEIIAHKGGIVIGQQTLPLVNEGD
AIFNLAYFSEDDEMVGQTVETYIDEMIDADTDQLTNGQITTSTL

Specific function: Unknown

COG id: COG3608

COG function: function code R; Predicted deacylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39917; Mature: 39917

Theoretical pI: Translated: 6.96; Mature: 6.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRQKGLKLVAKARQNKAFDILTYSVAPGERKVIEIEAAKLYTHSPLSIPVEIINGQHAG
CCCCHHHHHHHHHHCCCCEEEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEECCCCCC
PILMVNAAIHGDELNGVEIVRQLINNIDPKTLKGTLIAVPIVNVFGFIHKSRYLPDRRDL
CEEEEEEEECCCCCCHHHHHHHHHHCCCCCHHCCCEEEEHHHHHHHHHHHHHCCCCHHHH
NRCFPGSEKGSLASRMANTFFTQIAKRCDYIVDLHTGAIHRTNLPQIRANLSNPETLRIA
HHCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCEECCCCHHHHHCCCCCHHEEHH
KAFATPLIVDSPLRDGSLRSEAERCGIPVLTYEAGEALRFEPIAINAGYVGVQRVMQSIG
HHHCCCEEEECCCCCCCCHHHHHHCCCCEEEECCCCCEEEEEEEEECCHHHHHHHHHHHH
MLKASRKRLPTAIIAKSTGWLRAESDGILRTIVTLGEQVEKDQVLAYISAPLGHGEIEII
HHHHHHHHCCEEEEECCCCCEEECCCCHHHHHHHHHHHCCHHHEEEEEECCCCCCEEEEE
AHKGGIVIGQQTLPLVNEGDAIFNLAYFSEDDEMVGQTVETYIDEMIDADTDQLTNGQIT
EECCCEEECCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEE
TSTL
ECCC
>Mature Secondary Structure
MQRQKGLKLVAKARQNKAFDILTYSVAPGERKVIEIEAAKLYTHSPLSIPVEIINGQHAG
CCCCHHHHHHHHHHCCCCEEEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEECCCCCC
PILMVNAAIHGDELNGVEIVRQLINNIDPKTLKGTLIAVPIVNVFGFIHKSRYLPDRRDL
CEEEEEEEECCCCCCHHHHHHHHHHCCCCCHHCCCEEEEHHHHHHHHHHHHHCCCCHHHH
NRCFPGSEKGSLASRMANTFFTQIAKRCDYIVDLHTGAIHRTNLPQIRANLSNPETLRIA
HHCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCEECCCCHHHHHCCCCCHHEEHH
KAFATPLIVDSPLRDGSLRSEAERCGIPVLTYEAGEALRFEPIAINAGYVGVQRVMQSIG
HHHCCCEEEECCCCCCCCHHHHHHCCCCEEEECCCCCEEEEEEEEECCHHHHHHHHHHHH
MLKASRKRLPTAIIAKSTGWLRAESDGILRTIVTLGEQVEKDQVLAYISAPLGHGEIEII
HHHHHHHHCCEEEEECCCCCEEECCCCHHHHHHHHHHHCCHHHEEEEEECCCCCCEEEEE
AHKGGIVIGQQTLPLVNEGDAIFNLAYFSEDDEMVGQTVETYIDEMIDADTDQLTNGQIT
EECCCEEECCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEE
TSTL
ECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA