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The map label for this gene is 209694346

Identifier: 209694346

GI number: 209694346

Start: 847796

End: 848317

Strand: Direct

Name: 209694346

Synonym: VSAL_I0758

Alternate gene names: NA

Gene position: 847796-848317 (Clockwise)

Preceding gene: 209694344

Following gene: 209694350

Centisome position: 25.5

GC content: 41.19

Gene sequence:

>522_bases
ATGATAAGCGGTCGATTTTATGGGTTATCTAACATGATAGAAAAAGAAGCGTTATTAGATTCAATCATTCAACAATTACG
TCAAGTTCACCAAATGGCGTTAGAGGCGACACAGCGAGCGATTGAACAAGCGACAGATAAAGAAGCCATTGCTCGAAGTA
AGTATGAAACGTTTGGTTTAGAAGCCTCGTATTTAGCGCATGGGCAAGCTCGAAGAGTGTCAGAATGTGACGCCGATATT
TTAGCGTATCGTAAATTACCACGCTTAGAATACGGTGAAGATAGTGTGATAAATCAGTGTGCGTTAGTGACATTAGTGAA
TCAGGATGATATCGAAAGTCAGTTCTTTATTGGACCGTCAGCGGGGGGGGGGGTAAAAGTGACTCATGAAGACATGACAT
TTTTGTTGATCACGCCATCAGCACCCTTAGGTAAGGCCATGATAGGAAAGCAGCTTGGAGATGAATTCGAACTTGATTTA
TCGGGAAGAAAACAACAATACGAAATTATTGGTGTTCAGTAA

Upstream 100 bases:

>100_bases
ACAGGGATTCACTCTATTCTCATTGAGTTACGATTCTTTTTGGAAATACTTCACATTAAAAATGGGATAGGAAGTTAAAG
CGGCCCTCTTTATTTTTGTT

Downstream 100 bases:

>100_bases
TGCCGGTAAATATTGTGGATAAAATAAGAGAGGCGAACCTCTCTTATTTTTGTTTTTGGTATCGAAATATCAAAGGGTAG
ATGTTGTGATCTGCCCATTC

Product: hypothetical protein

Products: NA

Alternate protein names: Transcription Elongation Factor; Transcriptional Elongation Factor

Number of amino acids: Translated: 173; Mature: 173

Protein sequence:

>173_residues
MISGRFYGLSNMIEKEALLDSIIQQLRQVHQMALEATQRAIEQATDKEAIARSKYETFGLEASYLAHGQARRVSECDADI
LAYRKLPRLEYGEDSVINQCALVTLVNQDDIESQFFIGPSAGGGVKVTHEDMTFLLITPSAPLGKAMIGKQLGDEFELDL
SGRKQQYEIIGVQ

Sequences:

>Translated_173_residues
MISGRFYGLSNMIEKEALLDSIIQQLRQVHQMALEATQRAIEQATDKEAIARSKYETFGLEASYLAHGQARRVSECDADI
LAYRKLPRLEYGEDSVINQCALVTLVNQDDIESQFFIGPSAGGGVKVTHEDMTFLLITPSAPLGKAMIGKQLGDEFELDL
SGRKQQYEIIGVQ
>Mature_173_residues
MISGRFYGLSNMIEKEALLDSIIQQLRQVHQMALEATQRAIEQATDKEAIARSKYETFGLEASYLAHGQARRVSECDADI
LAYRKLPRLEYGEDSVINQCALVTLVNQDDIESQFFIGPSAGGGVKVTHEDMTFLLITPSAPLGKAMIGKQLGDEFELDL
SGRKQQYEIIGVQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19213; Mature: 19213

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISGRFYGLSNMIEKEALLDSIIQQLRQVHQMALEATQRAIEQATDKEAIARSKYETFGL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
EASYLAHGQARRVSECDADILAYRKLPRLEYGEDSVINQCALVTLVNQDDIESQFFIGPS
CHHHHHCCCHHHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHEEEEECCCCCCCEEEECCC
AGGGVKVTHEDMTFLLITPSAPLGKAMIGKQLGDEFELDLSGRKQQYEIIGVQ
CCCCEEEEECCEEEEEEECCCCCCHHHHHHHCCCCEEECCCCCCEEEEEEECC
>Mature Secondary Structure
MISGRFYGLSNMIEKEALLDSIIQQLRQVHQMALEATQRAIEQATDKEAIARSKYETFGL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
EASYLAHGQARRVSECDADILAYRKLPRLEYGEDSVINQCALVTLVNQDDIESQFFIGPS
CHHHHHCCCHHHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHEEEEECCCCCCCEEEECCC
AGGGVKVTHEDMTFLLITPSAPLGKAMIGKQLGDEFELDLSGRKQQYEIIGVQ
CCCCEEEEECCEEEEEEECCCCCCHHHHHHHCCCCEEECCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA