Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is 209694344

Identifier: 209694344

GI number: 209694344

Start: 844660

End: 844986

Strand: Direct

Name: 209694344

Synonym: VSAL_I0756

Alternate gene names: NA

Gene position: 844660-844986 (Clockwise)

Preceding gene: 209694343

Following gene: 209694346

Centisome position: 25.4

GC content: 41.9

Gene sequence:

>327_bases
ATGGCAAAGTTTGATTACCGTATTGTAGAAAAACGCAACGCTTGGGCTGCTGAAATTACGCGCCAAGTTACTTCTCGCAG
AACGGTTGTATCTAAGCGTCAACTTGGTTTTGAAAGCGAAGCTGAAGCAGTTGAATGGGCTCAAAAAGAGCTTGTTGAAT
TTGCAAAGACTCAAGCTGTTCGTAATGATCGTAAAGCTGATCAACGTAGCGAAAAAGAAGAAATGATCGCTCGTAAGAAA
GAAAAATCAGCGGCACAAAAAGCAGAATATGAAGCTGCTCGTGATGCGAAAGAAGACGAAAGCGAATACGATTACGACGA
AGAGTAA

Upstream 100 bases:

>100_bases
AATAGCGGGCATTAAAGGGAATGCAAGTATTATACTGCAGTTATAGATGGATTTTTAAGTAATGATCTATCCCTTAACTA
TCGAATTCTAGGAAATAAAA

Downstream 100 bases:

>100_bases
TCTTCTCTATCTATTTAAAATAAAAAAGGCGCTTACTTGAGCGCCTTTTTTGTGCCTGTTGTTTTATGTTATTGAGCGTT
CATTAATGTCAGTTTCTCGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 108; Mature: 107

Protein sequence:

>108_residues
MAKFDYRIVEKRNAWAAEITRQVTSRRTVVSKRQLGFESEAEAVEWAQKELVEFAKTQAVRNDRKADQRSEKEEMIARKK
EKSAAQKAEYEAARDAKEDESEYDYDEE

Sequences:

>Translated_108_residues
MAKFDYRIVEKRNAWAAEITRQVTSRRTVVSKRQLGFESEAEAVEWAQKELVEFAKTQAVRNDRKADQRSEKEEMIARKK
EKSAAQKAEYEAARDAKEDESEYDYDEE
>Mature_107_residues
AKFDYRIVEKRNAWAAEITRQVTSRRTVVSKRQLGFESEAEAVEWAQKELVEFAKTQAVRNDRKADQRSEKEEMIARKKE
KSAAQKAEYEAARDAKEDESEYDYDEE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12711; Mature: 12580

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKFDYRIVEKRNAWAAEITRQVTSRRTVVSKRQLGFESEAEAVEWAQKELVEFAKTQAV
CCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
RNDRKADQRSEKEEMIARKKEKSAAQKAEYEAARDAKEDESEYDYDEE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
AKFDYRIVEKRNAWAAEITRQVTSRRTVVSKRQLGFESEAEAVEWAQKELVEFAKTQAV
CCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
RNDRKADQRSEKEEMIARKKEKSAAQKAEYEAARDAKEDESEYDYDEE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA