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The map label for this gene is oadB [H]

Identifier: 209694231

GI number: 209694231

Start: 711398

End: 712528

Strand: Direct

Name: oadB [H]

Synonym: VSAL_I0640

Alternate gene names: 209694231

Gene position: 711398-712528 (Clockwise)

Preceding gene: 209694230

Following gene: 209694232

Centisome position: 21.39

GC content: 41.11

Gene sequence:

>1131_bases
ATGGATGGTTTATTAATATTATGGAATGAAACGGCGATTGCTAATTTTAAGTTTGAACAACTTATTATGATTTTAGTCGG
TTGTGGGCTTTTATTTTTAGCAATACGTAAAGGGTTTGAGCCTTTATTGCTGTTACCTATTGGTTTTGGTGCAGTCTTAG
CAAATATACCGAATGCAGGGTTTACCGATCCTGGTGGACTTTTGTATTACGTTTATTATGTCGGGATTGAAACGGGAGTC
TTCCCACTTTTGATCTTTATGGGTGTAGGAGCGATGACGGACTTTGGTGCCTTAATTGCAAACCCAAAGACTCTATGGTT
AGGTGCCGCGGCTCAAGTAGGTATTTTTGCTACGTTGTTCGGTGCCATATTACTTAATTTTGTGCCAGGAATGGAATTCT
CATTAGCAGATGCTTCGTCAATCGCCATTATTGGTGGTGCAGATGGACCGACTGCCATTTTCTTAGCAAGTAAGCTTTCT
CCTGATTTATTGGGGGCGATTGCGGTTGCTGCTTATAGTTATATGGCTCTTGTTCCAATTATCCAGCCACCGATAATGAA
AGCGTTAACTACGCCGGAAGAACGTCAAATTAAGATGGCTCAATTGCGCCATGTTAGTAAGGCAGAGAAAATCATTTTCC
CACTTGCTGTTTTACTGATGACTATTTTGTTTTTACCTTCAGCAACGCCACTCGTTGGTATGTTCTGTTTAGGTAATTTA
ATGAAAGAATCAGGTGTGGTTGATCGTTTATCGAATACGGCTCAGAATGAATTGATCAATATAGTCACGATCTTCTTAGG
TTTAGGGGTCGGATCAAAATTAAAAGCAGAAACGTTCCTTAATGTAGAAACGTTAGGTATTTTACTGTTAGGTGCAGTTG
CCTTCAGTGTGGGTACTGCTGGCGGTGTTATCATGGCTAAAATATTGAACAAGTATTCAAAAGAAGACATTAACCCATTA
ATTGGTGCTGCAGGTGTTTCCGCCGTGCCAATGGCGGCGCGTGTTGTTAATAAAGTCGGTCTTGAGGCTAATCCTCAAAA
CTTTTTGTTAATGCATGCGATGGGACCGAATGTGGCTGGGGTTTTAGGATCTGCAGTTGCTGCGGGTATTCTCTTAGCTC
TTGTTGGATAG

Upstream 100 bases:

>100_bases
GAGCATCACGTAATGGTACCGTTCAAGATATTTTAACTAAAGAGGGCGATGCAGTAGCAGTTGGTACACCATTGCTTTCT
CTAGCCTAAGGTAAGTAAAC

Downstream 100 bases:

>100_bases
TTCCAAATAAAACTTAACAATAAAAGGGTGCAGATGCGCCCTTTTTTATTTTATGCTGTAGCAATATAAATCGTAATCAA
TGGAATTAATTCAGTCATGT

Product: oxaloacetate decarboxylase, beta subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 376; Mature: 376

Protein sequence:

>376_residues
MDGLLILWNETAIANFKFEQLIMILVGCGLLFLAIRKGFEPLLLLPIGFGAVLANIPNAGFTDPGGLLYYVYYVGIETGV
FPLLIFMGVGAMTDFGALIANPKTLWLGAAAQVGIFATLFGAILLNFVPGMEFSLADASSIAIIGGADGPTAIFLASKLS
PDLLGAIAVAAYSYMALVPIIQPPIMKALTTPEERQIKMAQLRHVSKAEKIIFPLAVLLMTILFLPSATPLVGMFCLGNL
MKESGVVDRLSNTAQNELINIVTIFLGLGVGSKLKAETFLNVETLGILLLGAVAFSVGTAGGVIMAKILNKYSKEDINPL
IGAAGVSAVPMAARVVNKVGLEANPQNFLLMHAMGPNVAGVLGSAVAAGILLALVG

Sequences:

>Translated_376_residues
MDGLLILWNETAIANFKFEQLIMILVGCGLLFLAIRKGFEPLLLLPIGFGAVLANIPNAGFTDPGGLLYYVYYVGIETGV
FPLLIFMGVGAMTDFGALIANPKTLWLGAAAQVGIFATLFGAILLNFVPGMEFSLADASSIAIIGGADGPTAIFLASKLS
PDLLGAIAVAAYSYMALVPIIQPPIMKALTTPEERQIKMAQLRHVSKAEKIIFPLAVLLMTILFLPSATPLVGMFCLGNL
MKESGVVDRLSNTAQNELINIVTIFLGLGVGSKLKAETFLNVETLGILLLGAVAFSVGTAGGVIMAKILNKYSKEDINPL
IGAAGVSAVPMAARVVNKVGLEANPQNFLLMHAMGPNVAGVLGSAVAAGILLALVG
>Mature_376_residues
MDGLLILWNETAIANFKFEQLIMILVGCGLLFLAIRKGFEPLLLLPIGFGAVLANIPNAGFTDPGGLLYYVYYVGIETGV
FPLLIFMGVGAMTDFGALIANPKTLWLGAAAQVGIFATLFGAILLNFVPGMEFSLADASSIAIIGGADGPTAIFLASKLS
PDLLGAIAVAAYSYMALVPIIQPPIMKALTTPEERQIKMAQLRHVSKAEKIIFPLAVLLMTILFLPSATPLVGMFCLGNL
MKESGVVDRLSNTAQNELINIVTIFLGLGVGSKLKAETFLNVETLGILLLGAVAFSVGTAGGVIMAKILNKYSKEDINPL
IGAAGVSAVPMAARVVNKVGLEANPQNFLLMHAMGPNVAGVLGSAVAAGILLALVG

Specific function: Lyase and sodium transporter [H]

COG id: COG1883

COG function: function code C; Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gcdB/mmdB/oadB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005661 [H]

Pfam domain/function: PF03977 OAD_beta [H]

EC number: =4.1.1.3 [H]

Molecular weight: Translated: 39230; Mature: 39230

Theoretical pI: Translated: 5.83; Mature: 5.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDGLLILWNETAIANFKFEQLIMILVGCGLLFLAIRKGFEPLLLLPIGFGAVLANIPNAG
CCCEEEEECCCEEECCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHCCCCCC
FTDPGGLLYYVYYVGIETGVFPLLIFMGVGAMTDFGALIANPKTLWLGAAAQVGIFATLF
CCCCCCCEEEEEEHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEEEECHHHHHHHHHHH
GAILLNFVPGMEFSLADASSIAIIGGADGPTAIFLASKLSPDLLGAIAVAAYSYMALVPI
HHHHHHHCCCCCEEECCCCCEEEEECCCCCEEEEEEHHCCHHHHHHHHHHHHHHHHHHHH
IQPPIMKALTTPEERQIKMAQLRHVSKAEKIIFPLAVLLMTILFLPSATPLVGMFCLGNL
CCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
MKESGVVDRLSNTAQNELINIVTIFLGLGVGSKLKAETFLNVETLGILLLGAVAFSVGTA
HHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHCCC
GGVIMAKILNKYSKEDINPLIGAAGVSAVPMAARVVNKVGLEANPQNFLLMHAMGPNVAG
CHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHH
VLGSAVAAGILLALVG
HHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDGLLILWNETAIANFKFEQLIMILVGCGLLFLAIRKGFEPLLLLPIGFGAVLANIPNAG
CCCEEEEECCCEEECCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHCCCCCC
FTDPGGLLYYVYYVGIETGVFPLLIFMGVGAMTDFGALIANPKTLWLGAAAQVGIFATLF
CCCCCCCEEEEEEHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEEEECHHHHHHHHHHH
GAILLNFVPGMEFSLADASSIAIIGGADGPTAIFLASKLSPDLLGAIAVAAYSYMALVPI
HHHHHHHCCCCCEEECCCCCEEEEECCCCCEEEEEEHHCCHHHHHHHHHHHHHHHHHHHH
IQPPIMKALTTPEERQIKMAQLRHVSKAEKIIFPLAVLLMTILFLPSATPLVGMFCLGNL
CCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
MKESGVVDRLSNTAQNELINIVTIFLGLGVGSKLKAETFLNVETLGILLLGAVAFSVGTA
HHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHCCC
GGVIMAKILNKYSKEDINPLIGAAGVSAVPMAARVVNKVGLEANPQNFLLMHAMGPNVAG
CHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHH
VLGSAVAAGILLALVG
HHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]