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The map label for this gene is yqaA [H]

Identifier: 209694232

GI number: 209694232

Start: 712625

End: 713056

Strand: Direct

Name: yqaA [H]

Synonym: VSAL_I0641

Alternate gene names: 209694232

Gene position: 712625-713056 (Clockwise)

Preceding gene: 209694231

Following gene: 209694233

Centisome position: 21.43

GC content: 38.66

Gene sequence:

>432_bases
ATGTTTGATTGGTTCAATGCAGATTCAGCATTATGGGTATTATTTAGTTCTGGGTTTTTAAGTGCCACTTTATTACCTGG
GGCGTCAGAAGCCAGTTTAATTGCTACGTTAAAATTAGACAGTTTTTCAATGTGGACAGTTATTACAGTCGCAACATTAG
GAAATACTTTAGGAGGGATAACAAATTATTGGCTTGGTTTGTTACTTCCTGATAAAACTTCTTCACAGAAACACGGTCAT
AAAGCCATAGAATGGATAAAGAAATACGGTTATTGGACGTTATTATTTAGTTGGTTACCCGTGATCGGCGACCCTTTATG
CTTGGCCGCTGGGTGGTTAAGAATGAAGTTTTTACCATGCGTGATTTTAATTGGGATAGGAAAGGCTGCTCGATACGTAC
TGTTGTCGCTTGCCGTGAATGGGATTTTATAG

Upstream 100 bases:

>100_bases
ATAGTTCCAAATAAAACTTAACAATAAAAGGGTGCAGATGCGCCCTTTTTTATTTTATGCTGTAGCAATATAAATCGTAA
TCAATGGAATTAATTCAGTC

Downstream 100 bases:

>100_bases
GAATTAAAATGAAAAAATTACTTTGTGTATCGATTGCATTGGCTTTAGTAGGGTGCAGTAATTCAGAATTTGAAGCACCA
AAAACATCAGATTTACCGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MFDWFNADSALWVLFSSGFLSATLLPGASEASLIATLKLDSFSMWTVITVATLGNTLGGITNYWLGLLLPDKTSSQKHGH
KAIEWIKKYGYWTLLFSWLPVIGDPLCLAAGWLRMKFLPCVILIGIGKAARYVLLSLAVNGIL

Sequences:

>Translated_143_residues
MFDWFNADSALWVLFSSGFLSATLLPGASEASLIATLKLDSFSMWTVITVATLGNTLGGITNYWLGLLLPDKTSSQKHGH
KAIEWIKKYGYWTLLFSWLPVIGDPLCLAAGWLRMKFLPCVILIGIGKAARYVLLSLAVNGIL
>Mature_143_residues
MFDWFNADSALWVLFSSGFLSATLLPGASEASLIATLKLDSFSMWTVITVATLGNTLGGITNYWLGLLLPDKTSSQKHGH
KAIEWIKKYGYWTLLFSWLPVIGDPLCLAAGWLRMKFLPCVILIGIGKAARYVLLSLAVNGIL

Specific function: Unknown

COG id: COG1238

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0489 [H]

Homologues:

Organism=Escherichia coli, GI1789045, Length=135, Percent_Identity=47.4074074074074, Blast_Score=115, Evalue=1e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 15695; Mature: 15695

Theoretical pI: Translated: 9.15; Mature: 9.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFDWFNADSALWVLFSSGFLSATLLPGASEASLIATLKLDSFSMWTVITVATLGNTLGGI
CCCCCCCCCEEEEEEECCCCEEEECCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHH
TNYWLGLLLPDKTSSQKHGHKAIEWIKKYGYWTLLFSWLPVIGDPLCLAAGWLRMKFLPC
HHHHHHEECCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
VILIGIGKAARYVLLSLAVNGIL
HHHHHCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFDWFNADSALWVLFSSGFLSATLLPGASEASLIATLKLDSFSMWTVITVATLGNTLGGI
CCCCCCCCCEEEEEEECCCCEEEECCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHH
TNYWLGLLLPDKTSSQKHGHKAIEWIKKYGYWTLLFSWLPVIGDPLCLAAGWLRMKFLPC
HHHHHHEECCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
VILIGIGKAARYVLLSLAVNGIL
HHHHHCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]