| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
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The map label for this gene is oadG [H]
Identifier: 209694229
GI number: 209694229
Start: 709310
End: 709561
Strand: Direct
Name: oadG [H]
Synonym: VSAL_I0638
Alternate gene names: 209694229
Gene position: 709310-709561 (Clockwise)
Preceding gene: 209694228
Following gene: 209694230
Centisome position: 21.33
GC content: 40.87
Gene sequence:
>252_bases ATGACAGACATTGGAAGTCTACTATGGGAAGCAGCAACGCTAATGCTAACAGGCATGGGCGTTGTATTTATATTCCTCAC CATCCTCGTCTATCTAGTTCAACTTATGTCTAAGTTACTGCCTGTGGAGTTACCTCCAAAACAGGTATTGGCTGTTCAAA AAGTTCAGAATCCCGATGAAACAACAGTTCAGCCTCAAATTATAGCTGCTATTTCTGCTGCGGTTAAATTATACCGCCAA AAGAATCGATAA
Upstream 100 bases:
>100_bases TCGAGATAATCATTCTTTCTTTTTAGAATAAAAGAACACAATTAATTAGTTCGCTACAACTAAATTATACATTGTCACTA TCATCAAAAAGGAATAAAAG
Downstream 100 bases:
>100_bases ACTGTTTTAGGAAAATCATTACAAGGAGTTTGTAAGTATGTCTAAACCACTTTCTATCACTGATGTGGTACTTCGTGACG CCCACCAATCACTCTTCGCA
Product: oxaloacetate decarboxylase subunit gamma
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 83; Mature: 82
Protein sequence:
>83_residues MTDIGSLLWEAATLMLTGMGVVFIFLTILVYLVQLMSKLLPVELPPKQVLAVQKVQNPDETTVQPQIIAAISAAVKLYRQ KNR
Sequences:
>Translated_83_residues MTDIGSLLWEAATLMLTGMGVVFIFLTILVYLVQLMSKLLPVELPPKQVLAVQKVQNPDETTVQPQIIAAISAAVKLYRQ KNR >Mature_82_residues TDIGSLLWEAATLMLTGMGVVFIFLTILVYLVQLMSKLLPVELPPKQVLAVQKVQNPDETTVQPQIIAAISAAVKLYRQK NR
Specific function: Lyase and sodium transporter [H]
COG id: COG3630
COG function: function code C; Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, gamma subunit
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the oadG family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005899 [H]
Pfam domain/function: PF04277 OAD_gamma [H]
EC number: =4.1.1.3 [H]
Molecular weight: Translated: 9209; Mature: 9078
Theoretical pI: Translated: 9.77; Mature: 9.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDIGSLLWEAATLMLTGMGVVFIFLTILVYLVQLMSKLLPVELPPKQVLAVQKVQNPDE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCC TTVQPQIIAAISAAVKLYRQKNR CCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TDIGSLLWEAATLMLTGMGVVFIFLTILVYLVQLMSKLLPVELPPKQVLAVQKVQNPDE CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCC TTVQPQIIAAISAAVKLYRQKNR CCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA