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The map label for this gene is codA [H]

Identifier: 209694220

GI number: 209694220

Start: 694165

End: 695442

Strand: Reverse

Name: codA [H]

Synonym: VSAL_I0629

Alternate gene names: 209694220

Gene position: 695442-694165 (Counterclockwise)

Preceding gene: 209694221

Following gene: 209694219

Centisome position: 20.91

GC content: 39.2

Gene sequence:

>1278_bases
ATGACTGATTTATTAATTAAAAATATCGCACTACGAGATCAAGAAGGTTTATTCCAAATCTTGATTCAAGATGGTCAATT
TACAGCCATTGCTAACAACCATGAAGAACTGTCTTTTTCAGGGGATATTTTAGATGCTGAAGGTGGATTAGCGAATGCCC
CTTTCTGTGAGCCCCATGTTCATTTGGATACGACTCAAACCGCAGGCGAACCAAGCTGGAATATCTCGGGTACCCTTTTT
GAAGGTATAGAACGTTGGTCTGAGCGTAAGAAACTTCTCACTGTTGACGATGTTAAAAGCCGTGCGAAACAGACATTAAA
ATGGCAAATAGCTAACGGTATTCAACATGTTCGTACGCATGTCGATGTATCTGATCCAACACTGATTGCACTAAAAGCAA
TGCTTGAAGTAAAAGAAGAGATGAAAGAATGGATTGATATCCAAATCGTCGCTTTTCCTCAAGAAGGCATTCTTTCTTAC
CCTAATGGAAAAGCGTTATTAGAAGAAGCGGTTCAACTGGGTGCCGACGTTATTGGTGCTATTCCTCACTTTGAATTTAC
TCGTGAGTATGGCGTTGAATCACTTCATTATGTTTTCGAATTAGCGCAAAAATACGATCGTCTAATTGATGTGCATTGTG
ATGAAATTGATGATGAACAATCTCGCTTTATCGAAACCCTAGCCGCATTAGCTCATAAATTTAATATGGGCGAAAAAGTA
ACGGCCAGCCATACGACAGCTATGCATTCTTATAATGGGGCTTATGCTTCGCGTTTATTCCGACTATTAAAAATGTCAGG
CATCAACTTTGTCGCTAATCCATTAGTAAATATTCACTTACAAGGTCGATTTGATGATTACCCTAAACGCCGTGGCATCA
CACGCGTTAAAGAGATGCTTGCAAGCGACATTAACGTTTGTTTTGGTCATGATGATATCTTCGACCCTTGGTATCCATTA
GGCACGGCTAACATGCTTCAAGTTCTGCACATGGGACTGCATGTATGCCAGATTATGGGCTATGAGCAAATCAACCAAGG
CCTTGATCTTATTAGCTACAAATCGGCAAGAACACTAAATATTCAAGAAAATTATGGTATTGATGTAGGTAAGCCAGGTA
ATTTAATTATTCTTCCTGCTGAAAATGGGTTTGATGCACTTCGTCGTCAAGTTCCTGTTCGTTACTCTATCCGTCAAGGT
AAAATTATTTCAGAAACTCAACCAGCAACGACTACAATTACTTTAGATAAAGCAGAGATAGTTTCATTTAAACGTTAA

Upstream 100 bases:

>100_bases
TTGAACGCCGTATTAGGTGGCGCATTAGGTTACTTATTGCTGAACCCAATTTTAAATAAAGAACCAGCGTCTAAAACAGA
AATAGCATAGAAGAATTATC

Downstream 100 bases:

>100_bases
TTCAATAAATCACATCATAAAAAGACAAGTGGGAGCCTAAGTGCTCCCATTTTTTATGACTACTCTAGCCAGAATGTTAT
ACTTACATTAACTCAAGAAA

Product: cytosine deaminase

Products: NA

Alternate protein names: Cytosine aminohydrolase [H]

Number of amino acids: Translated: 425; Mature: 424

Protein sequence:

>425_residues
MTDLLIKNIALRDQEGLFQILIQDGQFTAIANNHEELSFSGDILDAEGGLANAPFCEPHVHLDTTQTAGEPSWNISGTLF
EGIERWSERKKLLTVDDVKSRAKQTLKWQIANGIQHVRTHVDVSDPTLIALKAMLEVKEEMKEWIDIQIVAFPQEGILSY
PNGKALLEEAVQLGADVIGAIPHFEFTREYGVESLHYVFELAQKYDRLIDVHCDEIDDEQSRFIETLAALAHKFNMGEKV
TASHTTAMHSYNGAYASRLFRLLKMSGINFVANPLVNIHLQGRFDDYPKRRGITRVKEMLASDINVCFGHDDIFDPWYPL
GTANMLQVLHMGLHVCQIMGYEQINQGLDLISYKSARTLNIQENYGIDVGKPGNLIILPAENGFDALRRQVPVRYSIRQG
KIISETQPATTTITLDKAEIVSFKR

Sequences:

>Translated_425_residues
MTDLLIKNIALRDQEGLFQILIQDGQFTAIANNHEELSFSGDILDAEGGLANAPFCEPHVHLDTTQTAGEPSWNISGTLF
EGIERWSERKKLLTVDDVKSRAKQTLKWQIANGIQHVRTHVDVSDPTLIALKAMLEVKEEMKEWIDIQIVAFPQEGILSY
PNGKALLEEAVQLGADVIGAIPHFEFTREYGVESLHYVFELAQKYDRLIDVHCDEIDDEQSRFIETLAALAHKFNMGEKV
TASHTTAMHSYNGAYASRLFRLLKMSGINFVANPLVNIHLQGRFDDYPKRRGITRVKEMLASDINVCFGHDDIFDPWYPL
GTANMLQVLHMGLHVCQIMGYEQINQGLDLISYKSARTLNIQENYGIDVGKPGNLIILPAENGFDALRRQVPVRYSIRQG
KIISETQPATTTITLDKAEIVSFKR
>Mature_424_residues
TDLLIKNIALRDQEGLFQILIQDGQFTAIANNHEELSFSGDILDAEGGLANAPFCEPHVHLDTTQTAGEPSWNISGTLFE
GIERWSERKKLLTVDDVKSRAKQTLKWQIANGIQHVRTHVDVSDPTLIALKAMLEVKEEMKEWIDIQIVAFPQEGILSYP
NGKALLEEAVQLGADVIGAIPHFEFTREYGVESLHYVFELAQKYDRLIDVHCDEIDDEQSRFIETLAALAHKFNMGEKVT
ASHTTAMHSYNGAYASRLFRLLKMSGINFVANPLVNIHLQGRFDDYPKRRGITRVKEMLASDINVCFGHDDIFDPWYPLG
TANMLQVLHMGLHVCQIMGYEQINQGLDLISYKSARTLNIQENYGIDVGKPGNLIILPAENGFDALRRQVPVRYSIRQGK
IISETQPATTTITLDKAEIVSFKR

Specific function: Unknown

COG id: COG0402

COG function: function code FR; Cytosine deaminase and related metal-dependent hydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786531, Length=420, Percent_Identity=77.3809523809524, Blast_Score=681, Evalue=0.0,
Organism=Escherichia coli, GI1786517, Length=328, Percent_Identity=23.1707317073171, Blast_Score=74, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013108
- InterPro:   IPR011059 [H]

Pfam domain/function: PF07969 Amidohydro_3 [H]

EC number: =3.5.4.1 [H]

Molecular weight: Translated: 47893; Mature: 47762

Theoretical pI: Translated: 5.42; Mature: 5.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDLLIKNIALRDQEGLFQILIQDGQFTAIANNHEELSFSGDILDAEGGLANAPFCEPHV
CCCHHHHHHHCCCCCCCEEEEEECCCEEEEECCCCCEEECCCEEECCCCCCCCCCCCCCE
HLDTTQTAGEPSWNISGTLFEGIERWSERKKLLTVDDVKSRAKQTLKWQIANGIQHVRTH
EECCCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHH
VDVSDPTLIALKAMLEVKEEMKEWIDIQIVAFPQEGILSYPNGKALLEEAVQLGADVIGA
CCCCCCHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCHHHHHHHHHHCHHHHHC
IPHFEFTREYGVESLHYVFELAQKYDRLIDVHCDEIDDEQSRFIETLAALAHKFNMGEKV
CCCHHHHHHHCHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHCCCCCEE
TASHTTAMHSYNGAYASRLFRLLKMSGINFVANPLVNIHLQGRFDDYPKRRGITRVKEML
ECHHHHHHHCCCCHHHHHHHHHHHHCCCCEEECCEEEEEEECCCCCCHHHCCHHHHHHHH
ASDINVCFGHDDIFDPWYPLGTANMLQVLHMGLHVCQIMGYEQINQGLDLISYKSARTLN
HCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHCCCCEEEECCCEEEE
IQENYGIDVGKPGNLIILPAENGFDALRRQVPVRYSIRQGKIISETQPATTTITLDKAEI
EHHCCCCCCCCCCCEEEEECCCCHHHHHHCCCCEEEECCCEEECCCCCCEEEEEECHHHH
VSFKR
HCCCC
>Mature Secondary Structure 
TDLLIKNIALRDQEGLFQILIQDGQFTAIANNHEELSFSGDILDAEGGLANAPFCEPHV
CCHHHHHHHCCCCCCCEEEEEECCCEEEEECCCCCEEECCCEEECCCCCCCCCCCCCCE
HLDTTQTAGEPSWNISGTLFEGIERWSERKKLLTVDDVKSRAKQTLKWQIANGIQHVRTH
EECCCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHH
VDVSDPTLIALKAMLEVKEEMKEWIDIQIVAFPQEGILSYPNGKALLEEAVQLGADVIGA
CCCCCCHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCHHHHHHHHHHCHHHHHC
IPHFEFTREYGVESLHYVFELAQKYDRLIDVHCDEIDDEQSRFIETLAALAHKFNMGEKV
CCCHHHHHHHCHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHCCCCCEE
TASHTTAMHSYNGAYASRLFRLLKMSGINFVANPLVNIHLQGRFDDYPKRRGITRVKEML
ECHHHHHHHCCCCHHHHHHHHHHHHCCCCEEECCEEEEEEECCCCCCHHHCCHHHHHHHH
ASDINVCFGHDDIFDPWYPLGTANMLQVLHMGLHVCQIMGYEQINQGLDLISYKSARTLN
HCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHCCCCEEEECCCEEEE
IQENYGIDVGKPGNLIILPAENGFDALRRQVPVRYSIRQGKIISETQPATTTITLDKAEI
EHHCCCCCCCCCCCEEEEECCCCHHHHHHCCCCEEEECCCEEECCCCCCEEEEEECHHHH
VSFKR
HCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1640834; 8450832; 9278503 [H]