Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is 209694219

Identifier: 209694219

GI number: 209694219

Start: 693819

End: 694052

Strand: Reverse

Name: 209694219

Synonym: VSAL_I0628

Alternate gene names: NA

Gene position: 694052-693819 (Counterclockwise)

Preceding gene: 209694220

Following gene: 209694216

Centisome position: 20.87

GC content: 35.9

Gene sequence:

>234_bases
ATGACACAGCAAAATAACCCGCTTCACGGTGTAACCCTGCAAGGGATCTTAACTGAATTAGTTGAGCACTATGGGTGGGA
AGAATTAAGCTACATGATAAACATCAATTGTTTTAAATCAGATCCAACAATTAAATCCAGCTTAAAGTTTTTACGTAAAA
CAGAATGGGCACGAGTTCGTGTTGAAAATGTGTACTTAAAACTTCAACGCCATAAAGAAAGAGCATCAAAATAA

Upstream 100 bases:

>100_bases
CATCATAAAAAGACAAGTGGGAGCCTAAGTGCTCCCATTTTTTATGACTACTCTAGCCAGAATGTTATACTTACATTAAC
TCAAGAAAAATGGCGATATT

Downstream 100 bases:

>100_bases
ATAGACGATAGAGAGTGTCTCTGTATCTACGTTATTTAATCGCTTAAAAATAAAAAGCCCCGTAAGTTTTCACTTACGGG
GCTTTTTTAATTAAAGAGCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 77; Mature: 76

Protein sequence:

>77_residues
MTQQNNPLHGVTLQGILTELVEHYGWEELSYMININCFKSDPTIKSSLKFLRKTEWARVRVENVYLKLQRHKERASK

Sequences:

>Translated_77_residues
MTQQNNPLHGVTLQGILTELVEHYGWEELSYMININCFKSDPTIKSSLKFLRKTEWARVRVENVYLKLQRHKERASK
>Mature_76_residues
TQQNNPLHGVTLQGILTELVEHYGWEELSYMININCFKSDPTIKSSLKFLRKTEWARVRVENVYLKLQRHKERASK

Specific function: Unknown

COG id: COG4628

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9147; Mature: 9015

Theoretical pI: Translated: 9.94; Mature: 9.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQQNNPLHGVTLQGILTELVEHYGWEELSYMININCFKSDPTIKSSLKFLRKTEWARVR
CCCCCCCCCCEEHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHH
VENVYLKLQRHKERASK
HHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TQQNNPLHGVTLQGILTELVEHYGWEELSYMININCFKSDPTIKSSLKFLRKTEWARVR
CCCCCCCCCEEHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHH
VENVYLKLQRHKERASK
HHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA