| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
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The map label for this gene is lgt
Identifier: 209694164
GI number: 209694164
Start: 629304
End: 630155
Strand: Direct
Name: lgt
Synonym: VSAL_I0572
Alternate gene names: 209694164
Gene position: 629304-630155 (Clockwise)
Preceding gene: 209694163
Following gene: 209694165
Centisome position: 18.93
GC content: 40.14
Gene sequence:
>852_bases ATGAGTCAGGGGTATTTAAACTTCCCACATATCGATCCAATATTATTTCAAATTGGACCATTGGCGATACGTTGGTATGG CTTAATGTATTTATTTGGTTTTATGTTTGCATTATGGCTAGCAAATAAACGCGCAGATAAACCAAACAGCGGTTGGACGA AAGATCAAGTCAGTGATCTTCTTTTTGCCGGCTTTCTTGGTGTCGTTATTGGTGGTCGAATTGGTTACGTCCTGTTTTAT AATTTTGGATATTTCCTAGATAATCCGTTGTATTTATTTGAAGTATGGACCGGTGGAATGTCTTTCCATGGTGGGTTATT AGGTGTTATTAGTGCGATGCTTTGGTATGGCTATAAAAACAACCGTAGCTTTTTTACCATTGCTGATTTTGTTGCACCCT TGGTTCCGTTTGGCTTAGGCGCGGGTCGTTTAGGTAATTTCATGAATGGTGAATTGTGGGGAAGAGTCACTGATGTGCCT TGGGCGATGGTATTCCCTAGCGGTGGTCCATTTCCGCGTCACCCATCGCAATTGTATGAATTTGCATTAGAGGGAATTGT ACTCTTCTTAATTTTGAACTGGTTTATTCGTAAACCTCGCCCATTAGGGGCGGTTTCTGGTTTATTCTTATTTGGGTACG GCACATTCCGTTTCTTGGTTGAATATGTTCGTGAACCTGATGCACAATTAGGGTTGTTTGGCGATTGGATCTCAATGGGA CAAATTCTATCATTACCAATGGTGATAGGTGGTTTATTGATGATGGTTTGGGCATTTAAGCGTAATCTTTATGCGACTGA TTTGAAGAACAGTGGCGATAAGCAAAATAGCTCAAAACAAAAAGCAAAATAA
Upstream 100 bases:
>100_bases AAGTTAACATCGTATTTACCTACACCAACATTAAAAAAAATCTTTGCCGTATTTCTAGTATTTATCGGCACTAAAATGTT CTTAGGATAAGAGAGTAATC
Downstream 100 bases:
>100_bases GCTAGAATAGCGATAATAACGATTTTTAGTAATGGCCTCTTCGTTAGAGGCCATTTTTTTAAGCCAATTTTAGAGAGCAT GACCGTGAAGCAGTATTTAG
Product: prolipoprotein diacylglyceryl transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 283; Mature: 282
Protein sequence:
>283_residues MSQGYLNFPHIDPILFQIGPLAIRWYGLMYLFGFMFALWLANKRADKPNSGWTKDQVSDLLFAGFLGVVIGGRIGYVLFY NFGYFLDNPLYLFEVWTGGMSFHGGLLGVISAMLWYGYKNNRSFFTIADFVAPLVPFGLGAGRLGNFMNGELWGRVTDVP WAMVFPSGGPFPRHPSQLYEFALEGIVLFLILNWFIRKPRPLGAVSGLFLFGYGTFRFLVEYVREPDAQLGLFGDWISMG QILSLPMVIGGLLMMVWAFKRNLYATDLKNSGDKQNSSKQKAK
Sequences:
>Translated_283_residues MSQGYLNFPHIDPILFQIGPLAIRWYGLMYLFGFMFALWLANKRADKPNSGWTKDQVSDLLFAGFLGVVIGGRIGYVLFY NFGYFLDNPLYLFEVWTGGMSFHGGLLGVISAMLWYGYKNNRSFFTIADFVAPLVPFGLGAGRLGNFMNGELWGRVTDVP WAMVFPSGGPFPRHPSQLYEFALEGIVLFLILNWFIRKPRPLGAVSGLFLFGYGTFRFLVEYVREPDAQLGLFGDWISMG QILSLPMVIGGLLMMVWAFKRNLYATDLKNSGDKQNSSKQKAK >Mature_282_residues SQGYLNFPHIDPILFQIGPLAIRWYGLMYLFGFMFALWLANKRADKPNSGWTKDQVSDLLFAGFLGVVIGGRIGYVLFYN FGYFLDNPLYLFEVWTGGMSFHGGLLGVISAMLWYGYKNNRSFFTIADFVAPLVPFGLGAGRLGNFMNGELWGRVTDVPW AMVFPSGGPFPRHPSQLYEFALEGIVLFLILNWFIRKPRPLGAVSGLFLFGYGTFRFLVEYVREPDAQLGLFGDWISMGQ ILSLPMVIGGLLMMVWAFKRNLYATDLKNSGDKQNSSKQKAK
Specific function: Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
COG id: COG0682
COG function: function code M; Prolipoprotein diacylglyceryltransferase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the lgt family
Homologues:
Organism=Escherichia coli, GI1789192, Length=285, Percent_Identity=60.7017543859649, Blast_Score=354, Evalue=4e-99,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): LGT_ALISL (B6EMX8)
Other databases:
- EMBL: FM178379 - RefSeq: YP_002262092.1 - GeneID: 6986556 - GenomeReviews: FM178379_GR - KEGG: vsa:VSAL_I0572 - HOGENOM: HBG450278 - OMA: NPIAFSL - ProtClustDB: PRK00052 - HAMAP: MF_01147 - InterPro: IPR001640 - TIGRFAMs: TIGR00544
Pfam domain/function: PF01790 LGT
EC number: 2.4.99.- [C]
Molecular weight: Translated: 31951; Mature: 31820
Theoretical pI: Translated: 9.77; Mature: 9.77
Prosite motif: PS01311 LGT
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x1d66a23c)-; HASH(0x1e338218)-; HASH(0x1f052264)-; HASH(0x1d406bf0)-; HASH(0x1dd2e800)-; HASH(0x1f0695c8)-; HASH(0x1e4f2340)-;
Cys/Met content:
0.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQGYLNFPHIDPILFQIGPLAIRWYGLMYLFGFMFALWLANKRADKPNSGWTKDQVSDL CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH LFAGFLGVVIGGRIGYVLFYNFGYFLDNPLYLFEVWTGGMSFHGGLLGVISAMLWYGYKN HHHHHHHHHHCCHHHHHHEEHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCC NRSFFTIADFVAPLVPFGLGAGRLGNFMNGELWGRVTDVPWAMVFPSGGPFPRHPSQLYE CCCEEEHHHHHHHHHHHCCCCHHHCCCCCCCCCCEECCCCEEEEECCCCCCCCCHHHHHH FALEGIVLFLILNWFIRKPRPLGAVSGLFLFGYGTFRFLVEYVREPDAQLGLFGDWISMG HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH QILSLPMVIGGLLMMVWAFKRNLYATDLKNSGDKQNSSKQKAK HHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCH >Mature Secondary Structure SQGYLNFPHIDPILFQIGPLAIRWYGLMYLFGFMFALWLANKRADKPNSGWTKDQVSDL CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH LFAGFLGVVIGGRIGYVLFYNFGYFLDNPLYLFEVWTGGMSFHGGLLGVISAMLWYGYKN HHHHHHHHHHCCHHHHHHEEHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCC NRSFFTIADFVAPLVPFGLGAGRLGNFMNGELWGRVTDVPWAMVFPSGGPFPRHPSQLYE CCCEEEHHHHHHHHHHHCCCCHHHCCCCCCCCCCEECCCCEEEEECCCCCCCCCHHHHHH FALEGIVLFLILNWFIRKPRPLGAVSGLFLFGYGTFRFLVEYVREPDAQLGLFGDWISMG HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH QILSLPMVIGGLLMMVWAFKRNLYATDLKNSGDKQNSSKQKAK HHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA