| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
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The map label for this gene is srmB [H]
Identifier: 209694151
GI number: 209694151
Start: 611726
End: 612976
Strand: Reverse
Name: srmB [H]
Synonym: VSAL_I0558
Alternate gene names: 209694151
Gene position: 612976-611726 (Counterclockwise)
Preceding gene: 209694152
Following gene: 209694146
Centisome position: 18.43
GC content: 42.29
Gene sequence:
>1251_bases GTGATCAAAACGTTTGCTGATCTCGATCTATCCCCTAACCTACTGCGCGCTCTTGAGGAGATTGGTTATCAACGTCCAAC TCAAGTTCAGGCTATGGCGATCCCTGAAGCATTAGAAGGTAAAGACATCCTTGCTTCTGCTCCAACTGGAACTGGTAAAT CTGCGGCTTTTTTACTGCCCGCTTTACAGCATCTTGACGATTTCCCTCGTCGTGATCCAGGTCCTGCGCGTGTATTAATC CTAACGCCAACTCGTGAACTTGCTATCCAAGTTGCGGATGAAGCTCGTGAATTAGCTAAATACACTCACCATAAAGTATT TACTATCACTGGTGGTATCAGCTACCAAGAGCACGCTGACATTCTGGCAAGAACTCAAGATATTGTGGTAGCAACGCCCG GTCGTTTAATGGAGTACATCGAAGCTGAACGTTTTGATTGTCGTGCCATTGAAACTCTGATCCTTGATGAAGCCGACCGT ATGTTAGACATGGGTTTTGGTCCTGTTGTTGATCGTCTTTCAAAAGAGTGTCGCTGGCGTAAACAAACCTTCTTGTTCTC TGCAACATTAGAAGGTCGTGGTGTTGATGGTTTTACCGCTGATCTATTAAACGAACCAGCAAAAATTGTCGCAGAACCAT CGCGCCGTGAACGTAAGAAAATCACTCAGTGGTATCACCGTGCCGATAGCTTGCCACATAAAATAGAATTACTGAAAAGC ATTCTAACGAACCAAACTGAGCGCGCGATTGTATTTGTAAAAACTCGTGAGCGTCTTGCAGAACTTCGTGGTCACTTAGA AACAGCTAAGATTTCATGTGCTTGGTTACAAGGTGAAATGCCTCAAGAAAGCCGTAACAATGCAATTTCTCGTTTCCGTG ATGGTAAAGTTAACGTATTGATTGCTACAGATGTTGCTGCTCGTGGCATCGATTTACCCGATGTTAGTCATGTCATTAAC TTTGATATGCCTCGTACAGCAGATGTATATTTACACCGTATCGGTCGTACTGCTCGTGCAGGTAAAAAAGGCAATGCTGT TTCTTTGATTGAAGCACATGATCAAAAAATGATGGAACGCGTTGGCCGTTACGTTAAAGAAGAAGATGAAATAATTAAAG AACGCTTTGTTGAAGGGTTAAAACCAACACATAAAAAAGCGGTATTTAAGAACAAACAAAAGAAAAATGCGAAGAAAAAA GCGGTGTTAGCAAAGAAAAATGCACCAAAGAAAAAGAAGAAGAAAAAGTAA
Upstream 100 bases:
>100_bases AATATGGCTTAAAAGATCGGTGATCCGTCTCTAATAAATCACTATAATGTCTGGCTAATATCATATTTATACTCTTTAGA CCTGAACGGAGAATCTAACA
Downstream 100 bases:
>100_bases TTACATAAACCCCGTTAACTAAAGCATTACGCTCTAGATACAATAAAAGCAGCCTGTATTTTTACAGGCTGCTTTTTTAT TGGAAGTCACTTAGGTACTA
Product: ATP-dependent RNA helicase SrmB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 416; Mature: 416
Protein sequence:
>416_residues MIKTFADLDLSPNLLRALEEIGYQRPTQVQAMAIPEALEGKDILASAPTGTGKSAAFLLPALQHLDDFPRRDPGPARVLI LTPTRELAIQVADEARELAKYTHHKVFTITGGISYQEHADILARTQDIVVATPGRLMEYIEAERFDCRAIETLILDEADR MLDMGFGPVVDRLSKECRWRKQTFLFSATLEGRGVDGFTADLLNEPAKIVAEPSRRERKKITQWYHRADSLPHKIELLKS ILTNQTERAIVFVKTRERLAELRGHLETAKISCAWLQGEMPQESRNNAISRFRDGKVNVLIATDVAARGIDLPDVSHVIN FDMPRTADVYLHRIGRTARAGKKGNAVSLIEAHDQKMMERVGRYVKEEDEIIKERFVEGLKPTHKKAVFKNKQKKNAKKK AVLAKKNAPKKKKKKK
Sequences:
>Translated_416_residues MIKTFADLDLSPNLLRALEEIGYQRPTQVQAMAIPEALEGKDILASAPTGTGKSAAFLLPALQHLDDFPRRDPGPARVLI LTPTRELAIQVADEARELAKYTHHKVFTITGGISYQEHADILARTQDIVVATPGRLMEYIEAERFDCRAIETLILDEADR MLDMGFGPVVDRLSKECRWRKQTFLFSATLEGRGVDGFTADLLNEPAKIVAEPSRRERKKITQWYHRADSLPHKIELLKS ILTNQTERAIVFVKTRERLAELRGHLETAKISCAWLQGEMPQESRNNAISRFRDGKVNVLIATDVAARGIDLPDVSHVIN FDMPRTADVYLHRIGRTARAGKKGNAVSLIEAHDQKMMERVGRYVKEEDEIIKERFVEGLKPTHKKAVFKNKQKKNAKKK AVLAKKNAPKKKKKKK >Mature_416_residues MIKTFADLDLSPNLLRALEEIGYQRPTQVQAMAIPEALEGKDILASAPTGTGKSAAFLLPALQHLDDFPRRDPGPARVLI LTPTRELAIQVADEARELAKYTHHKVFTITGGISYQEHADILARTQDIVVATPGRLMEYIEAERFDCRAIETLILDEADR MLDMGFGPVVDRLSKECRWRKQTFLFSATLEGRGVDGFTADLLNEPAKIVAEPSRRERKKITQWYHRADSLPHKIELLKS ILTNQTERAIVFVKTRERLAELRGHLETAKISCAWLQGEMPQESRNNAISRFRDGKVNVLIATDVAARGIDLPDVSHVIN FDMPRTADVYLHRIGRTARAGKKGNAVSLIEAHDQKMMERVGRYVKEEDEIIKERFVEGLKPTHKKAVFKNKQKKNAKKK AVLAKKNAPKKKKKKK
Specific function: RNA-dependent ATPase activity. Probably interacts with 23S ribosomal RNA [H]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI224593278, Length=367, Percent_Identity=38.1471389645777, Blast_Score=240, Evalue=2e-63, Organism=Homo sapiens, GI20149629, Length=363, Percent_Identity=35.8126721763085, Blast_Score=229, Evalue=3e-60, Organism=Homo sapiens, GI45446747, Length=378, Percent_Identity=33.8624338624339, Blast_Score=223, Evalue=2e-58, Organism=Homo sapiens, GI45446743, Length=378, Percent_Identity=33.8624338624339, Blast_Score=223, Evalue=2e-58, Organism=Homo sapiens, GI222352149, Length=395, Percent_Identity=35.4430379746835, Blast_Score=220, Evalue=2e-57, Organism=Homo sapiens, GI262118318, Length=439, Percent_Identity=33.7129840546697, Blast_Score=218, Evalue=9e-57, Organism=Homo sapiens, GI216548263, Length=440, Percent_Identity=34.0909090909091, Blast_Score=217, Evalue=2e-56, Organism=Homo sapiens, GI4758138, Length=382, Percent_Identity=33.2460732984293, Blast_Score=216, Evalue=2e-56, Organism=Homo sapiens, GI262231852, Length=440, Percent_Identity=34.0909090909091, Blast_Score=216, Evalue=2e-56, Organism=Homo sapiens, GI13518015, Length=440, Percent_Identity=34.0909090909091, Blast_Score=216, Evalue=3e-56, Organism=Homo sapiens, GI148613856, Length=380, Percent_Identity=33.9473684210526, Blast_Score=211, Evalue=1e-54, Organism=Homo sapiens, GI38201710, Length=380, Percent_Identity=33.9473684210526, Blast_Score=211, Evalue=1e-54, Organism=Homo sapiens, GI7661920, Length=362, Percent_Identity=32.5966850828729, Blast_Score=211, Evalue=1e-54, Organism=Homo sapiens, GI301171467, Length=371, Percent_Identity=35.5795148247978, Blast_Score=209, Evalue=3e-54, Organism=Homo sapiens, GI87196351, Length=371, Percent_Identity=35.5795148247978, Blast_Score=209, Evalue=4e-54, Organism=Homo sapiens, GI301171475, Length=371, Percent_Identity=35.5795148247978, Blast_Score=209, Evalue=4e-54, Organism=Homo sapiens, GI55749865, Length=393, Percent_Identity=32.0610687022901, Blast_Score=209, Evalue=5e-54, Organism=Homo sapiens, GI41327776, Length=360, Percent_Identity=33.0555555555556, Blast_Score=209, Evalue=5e-54, Organism=Homo sapiens, GI31542656, Length=437, Percent_Identity=33.8672768878719, Blast_Score=208, Evalue=7e-54, Organism=Homo sapiens, GI51094101, Length=351, Percent_Identity=35.8974358974359, Blast_Score=205, Evalue=6e-53, Organism=Homo sapiens, GI164419743, Length=351, Percent_Identity=35.8974358974359, Blast_Score=205, Evalue=7e-53, Organism=Homo sapiens, GI41327771, Length=386, Percent_Identity=33.160621761658, Blast_Score=205, Evalue=8e-53, Organism=Homo sapiens, GI169881239, Length=371, Percent_Identity=34.7708894878706, Blast_Score=205, Evalue=8e-53, Organism=Homo sapiens, GI13514809, Length=371, Percent_Identity=34.7708894878706, Blast_Score=205, Evalue=8e-53, Organism=Homo sapiens, GI41327773, Length=354, Percent_Identity=34.180790960452, Blast_Score=204, Evalue=1e-52, Organism=Homo sapiens, GI164664518, Length=368, Percent_Identity=34.2391304347826, Blast_Score=202, Evalue=3e-52, Organism=Homo sapiens, GI13514831, Length=364, Percent_Identity=33.5164835164835, Blast_Score=186, Evalue=2e-47, Organism=Homo sapiens, GI21071032, Length=369, Percent_Identity=31.7073170731707, Blast_Score=186, Evalue=3e-47, Organism=Homo sapiens, GI4758112, Length=362, Percent_Identity=31.2154696132597, Blast_Score=184, Evalue=1e-46, Organism=Homo sapiens, GI18375623, Length=362, Percent_Identity=31.2154696132597, Blast_Score=184, Evalue=1e-46, Organism=Homo sapiens, GI21040371, Length=362, Percent_Identity=30.3867403314917, Blast_Score=183, Evalue=3e-46, Organism=Homo sapiens, GI188035877, Length=412, Percent_Identity=32.0388349514563, Blast_Score=182, Evalue=5e-46, Organism=Homo sapiens, GI38327634, Length=373, Percent_Identity=32.171581769437, Blast_Score=180, Evalue=2e-45, Organism=Homo sapiens, GI8922886, Length=385, Percent_Identity=32.987012987013, Blast_Score=180, Evalue=2e-45, Organism=Homo sapiens, GI9506931, Length=403, Percent_Identity=32.5062034739454, Blast_Score=179, Evalue=3e-45, Organism=Homo sapiens, GI6005743, Length=388, Percent_Identity=32.7319587628866, Blast_Score=179, Evalue=4e-45, Organism=Homo sapiens, GI38569503, Length=378, Percent_Identity=31.2169312169312, Blast_Score=173, Evalue=3e-43, Organism=Homo sapiens, GI38569505, Length=378, Percent_Identity=31.2169312169312, Blast_Score=173, Evalue=3e-43, Organism=Homo sapiens, GI4503529, Length=366, Percent_Identity=30.0546448087432, Blast_Score=171, Evalue=1e-42, Organism=Homo sapiens, GI164419732, Length=372, Percent_Identity=34.1397849462366, Blast_Score=169, Evalue=4e-42, Organism=Homo sapiens, GI13129006, Length=388, Percent_Identity=31.1855670103093, Blast_Score=169, Evalue=5e-42, Organism=Homo sapiens, GI83700235, Length=367, Percent_Identity=30.7901907356948, Blast_Score=169, Evalue=5e-42, Organism=Homo sapiens, GI50659095, Length=372, Percent_Identity=30.3763440860215, Blast_Score=167, Evalue=1e-41, Organism=Homo sapiens, GI41327779, Length=367, Percent_Identity=34.3324250681199, Blast_Score=166, Evalue=4e-41, Organism=Homo sapiens, GI62241022, Length=369, Percent_Identity=32.2493224932249, Blast_Score=165, Evalue=6e-41, Organism=Homo sapiens, GI62241024, Length=347, Percent_Identity=32.5648414985591, Blast_Score=154, Evalue=2e-37, Organism=Homo sapiens, GI17505907, Length=456, Percent_Identity=27.6315789473684, Blast_Score=150, Evalue=2e-36, Organism=Homo sapiens, GI9966805, Length=346, Percent_Identity=32.3699421965318, Blast_Score=150, Evalue=3e-36, Organism=Homo sapiens, GI256223453, Length=373, Percent_Identity=30.0268096514745, Blast_Score=145, Evalue=6e-35, Organism=Homo sapiens, GI256773275, Length=383, Percent_Identity=32.3759791122715, Blast_Score=136, Evalue=3e-32, Organism=Homo sapiens, GI154759257, Length=414, Percent_Identity=29.951690821256, Blast_Score=134, Evalue=2e-31, Organism=Homo sapiens, GI4826686, Length=347, Percent_Identity=27.0893371757925, Blast_Score=128, Evalue=8e-30, Organism=Homo sapiens, GI20336298, Length=215, Percent_Identity=33.4883720930233, Blast_Score=101, Evalue=1e-21, Organism=Escherichia coli, GI1788930, Length=398, Percent_Identity=59.0452261306533, Blast_Score=459, Evalue=1e-130, Organism=Escherichia coli, GI1787016, Length=368, Percent_Identity=38.5869565217391, Blast_Score=254, Evalue=5e-69, Organism=Escherichia coli, GI87082221, Length=364, Percent_Identity=37.3626373626374, Blast_Score=242, Evalue=3e-65, Organism=Escherichia coli, GI1790214, Length=360, Percent_Identity=36.6666666666667, Blast_Score=224, Evalue=8e-60, Organism=Escherichia coli, GI1787605, Length=363, Percent_Identity=37.465564738292, Blast_Score=215, Evalue=3e-57, Organism=Caenorhabditis elegans, GI17555296, Length=409, Percent_Identity=33.9853300733496, Blast_Score=232, Evalue=3e-61, Organism=Caenorhabditis elegans, GI17510559, Length=402, Percent_Identity=34.0796019900498, Blast_Score=224, Evalue=5e-59, Organism=Caenorhabditis elegans, GI86570094, Length=369, Percent_Identity=36.3143631436314, Blast_Score=223, Evalue=1e-58, Organism=Caenorhabditis elegans, GI17552642, Length=377, Percent_Identity=35.8090185676393, Blast_Score=221, Evalue=7e-58, Organism=Caenorhabditis elegans, GI71995724, Length=365, Percent_Identity=33.6986301369863, Blast_Score=218, Evalue=5e-57, Organism=Caenorhabditis elegans, GI17507121, Length=365, Percent_Identity=33.4246575342466, Blast_Score=217, Evalue=9e-57, Organism=Caenorhabditis elegans, GI71999646, Length=353, Percent_Identity=33.7110481586402, Blast_Score=210, Evalue=1e-54, Organism=Caenorhabditis elegans, GI115533224, Length=334, Percent_Identity=37.125748502994, Blast_Score=210, Evalue=1e-54, Organism=Caenorhabditis elegans, GI71999644, Length=353, Percent_Identity=33.7110481586402, Blast_Score=209, Evalue=2e-54, Organism=Caenorhabditis elegans, GI71987143, Length=366, Percent_Identity=32.2404371584699, Blast_Score=205, Evalue=4e-53, Organism=Caenorhabditis elegans, GI17552114, Length=362, Percent_Identity=33.1491712707182, Blast_Score=203, Evalue=1e-52, Organism=Caenorhabditis elegans, GI17537549, Length=411, Percent_Identity=32.1167883211679, Blast_Score=203, Evalue=2e-52, Organism=Caenorhabditis elegans, GI17507877, Length=383, Percent_Identity=34.9869451697128, Blast_Score=201, Evalue=4e-52, Organism=Caenorhabditis elegans, GI17507881, Length=394, Percent_Identity=33.756345177665, Blast_Score=201, Evalue=6e-52, Organism=Caenorhabditis elegans, GI17510309, Length=391, Percent_Identity=32.7365728900256, Blast_Score=201, Evalue=6e-52, Organism=Caenorhabditis elegans, GI17510307, Length=391, Percent_Identity=32.7365728900256, Blast_Score=201, Evalue=6e-52, Organism=Caenorhabditis elegans, GI71995514, Length=391, Percent_Identity=32.7365728900256, Blast_Score=200, Evalue=9e-52, Organism=Caenorhabditis elegans, GI32565321, Length=385, Percent_Identity=31.6883116883117, Blast_Score=197, Evalue=1e-50, Organism=Caenorhabditis elegans, GI17507879, Length=419, Percent_Identity=32.2195704057279, Blast_Score=196, Evalue=2e-50, Organism=Caenorhabditis elegans, GI71995718, Length=404, Percent_Identity=32.6732673267327, Blast_Score=194, Evalue=1e-49, Organism=Caenorhabditis elegans, GI17505370, Length=352, Percent_Identity=33.2386363636364, Blast_Score=191, Evalue=6e-49, Organism=Caenorhabditis elegans, GI115532546, Length=391, Percent_Identity=32.7365728900256, Blast_Score=191, Evalue=7e-49, Organism=Caenorhabditis elegans, GI115532548, Length=383, Percent_Identity=32.8981723237598, Blast_Score=190, Evalue=1e-48, Organism=Caenorhabditis elegans, GI17507945, Length=361, Percent_Identity=32.6869806094183, Blast_Score=178, Evalue=5e-45, Organism=Caenorhabditis elegans, GI17509811, Length=365, Percent_Identity=31.5068493150685, Blast_Score=174, Evalue=1e-43, Organism=Caenorhabditis elegans, GI71982858, Length=364, Percent_Identity=30.7692307692308, Blast_Score=171, Evalue=7e-43, Organism=Caenorhabditis elegans, GI17508543, Length=414, Percent_Identity=28.0193236714976, Blast_Score=165, Evalue=5e-41, Organism=Caenorhabditis elegans, GI17507641, Length=384, Percent_Identity=32.5520833333333, Blast_Score=163, Evalue=1e-40, Organism=Caenorhabditis elegans, GI25148203, Length=412, Percent_Identity=27.4271844660194, Blast_Score=160, Evalue=1e-39, Organism=Caenorhabditis elegans, GI193206561, Length=351, Percent_Identity=31.0541310541311, Blast_Score=159, Evalue=2e-39, Organism=Caenorhabditis elegans, GI32564046, Length=372, Percent_Identity=31.989247311828, Blast_Score=153, Evalue=2e-37, Organism=Caenorhabditis elegans, GI193208216, Length=389, Percent_Identity=29.8200514138817, Blast_Score=153, Evalue=2e-37, Organism=Caenorhabditis elegans, GI17556951, Length=360, Percent_Identity=30.5555555555556, Blast_Score=151, Evalue=7e-37, Organism=Caenorhabditis elegans, GI17536099, Length=389, Percent_Identity=29.8200514138817, Blast_Score=149, Evalue=2e-36, Organism=Caenorhabditis elegans, GI17536101, Length=389, Percent_Identity=29.8200514138817, Blast_Score=149, Evalue=3e-36, Organism=Caenorhabditis elegans, GI17536103, Length=389, Percent_Identity=29.8200514138817, Blast_Score=146, Evalue=2e-35, Organism=Caenorhabditis elegans, GI71990816, Length=402, Percent_Identity=30.5970149253731, Blast_Score=143, Evalue=2e-34, Organism=Caenorhabditis elegans, GI17553716, Length=374, Percent_Identity=25.4010695187166, Blast_Score=131, Evalue=7e-31, Organism=Caenorhabditis elegans, GI71997889, Length=432, Percent_Identity=25.9259259259259, Blast_Score=115, Evalue=6e-26, Organism=Caenorhabditis elegans, GI25148205, Length=337, Percent_Identity=24.9258160237389, Blast_Score=110, Evalue=1e-24, Organism=Caenorhabditis elegans, GI71982862, Length=189, Percent_Identity=33.8624338624339, Blast_Score=106, Evalue=2e-23, Organism=Caenorhabditis elegans, GI25148291, Length=339, Percent_Identity=24.188790560472, Blast_Score=106, Evalue=3e-23, Organism=Caenorhabditis elegans, GI71987152, Length=108, Percent_Identity=38.8888888888889, Blast_Score=87, Evalue=1e-17, Organism=Saccharomyces cerevisiae, GI6323021, Length=362, Percent_Identity=36.4640883977901, Blast_Score=250, Evalue=3e-67, Organism=Saccharomyces cerevisiae, GI6321856, Length=371, Percent_Identity=36.1185983827493, Blast_Score=244, Evalue=2e-65, Organism=Saccharomyces cerevisiae, GI6324217, Length=376, Percent_Identity=32.1808510638298, Blast_Score=219, Evalue=6e-58, Organism=Saccharomyces cerevisiae, GI6320041, Length=404, Percent_Identity=33.6633663366337, Blast_Score=212, Evalue=7e-56, Organism=Saccharomyces cerevisiae, GI6320224, Length=372, Percent_Identity=33.3333333333333, Blast_Score=210, Evalue=3e-55, Organism=Saccharomyces cerevisiae, GI6320449, Length=407, Percent_Identity=34.3980343980344, Blast_Score=210, Evalue=4e-55, Organism=Saccharomyces cerevisiae, GI6325138, Length=387, Percent_Identity=32.2997416020672, Blast_Score=204, Evalue=2e-53, Organism=Saccharomyces cerevisiae, GI6321360, Length=344, Percent_Identity=35.4651162790698, Blast_Score=204, Evalue=3e-53, Organism=Saccharomyces cerevisiae, GI6324778, Length=385, Percent_Identity=31.6883116883117, Blast_Score=200, Evalue=4e-52, Organism=Saccharomyces cerevisiae, GI6323947, Length=360, Percent_Identity=35.5555555555556, Blast_Score=197, Evalue=2e-51, Organism=Saccharomyces cerevisiae, GI6322912, Length=371, Percent_Identity=33.9622641509434, Blast_Score=196, Evalue=8e-51, Organism=Saccharomyces cerevisiae, GI6322323, Length=371, Percent_Identity=33.9622641509434, Blast_Score=196, Evalue=8e-51, Organism=Saccharomyces cerevisiae, GI6321963, Length=447, Percent_Identity=32.8859060402685, Blast_Score=192, Evalue=1e-49, Organism=Saccharomyces cerevisiae, GI6322427, Length=370, Percent_Identity=31.6216216216216, Blast_Score=181, Evalue=3e-46, Organism=Saccharomyces cerevisiae, GI6320119, Length=382, Percent_Identity=31.151832460733, Blast_Score=179, Evalue=8e-46, Organism=Saccharomyces cerevisiae, GI6324620, Length=363, Percent_Identity=31.6804407713499, Blast_Score=173, Evalue=4e-44, Organism=Saccharomyces cerevisiae, GI6319618, Length=404, Percent_Identity=30.1980198019802, Blast_Score=173, Evalue=5e-44, Organism=Saccharomyces cerevisiae, GI6323306, Length=418, Percent_Identity=28.4688995215311, Blast_Score=164, Evalue=2e-41, Organism=Saccharomyces cerevisiae, GI6319714, Length=393, Percent_Identity=27.9898218829517, Blast_Score=164, Evalue=2e-41, Organism=Saccharomyces cerevisiae, GI6321111, Length=365, Percent_Identity=28.7671232876712, Blast_Score=160, Evalue=2e-40, Organism=Saccharomyces cerevisiae, GI6320400, Length=371, Percent_Identity=29.9191374663073, Blast_Score=151, Evalue=2e-37, Organism=Saccharomyces cerevisiae, GI6321267, Length=373, Percent_Identity=30.0268096514745, Blast_Score=146, Evalue=5e-36, Organism=Saccharomyces cerevisiae, GI6320173, Length=201, Percent_Identity=35.3233830845771, Blast_Score=133, Evalue=5e-32, Organism=Saccharomyces cerevisiae, GI6322876, Length=441, Percent_Identity=26.984126984127, Blast_Score=127, Evalue=3e-30, Organism=Saccharomyces cerevisiae, GI6324366, Length=403, Percent_Identity=26.5508684863524, Blast_Score=114, Evalue=2e-26, Organism=Drosophila melanogaster, GI24662330, Length=402, Percent_Identity=34.5771144278607, Blast_Score=246, Evalue=2e-65, Organism=Drosophila melanogaster, GI21356161, Length=380, Percent_Identity=37.6315789473684, Blast_Score=240, Evalue=1e-63, Organism=Drosophila melanogaster, GI24585582, Length=387, Percent_Identity=34.8837209302326, Blast_Score=222, Evalue=4e-58, Organism=Drosophila melanogaster, GI28574962, Length=371, Percent_Identity=33.9622641509434, Blast_Score=219, Evalue=3e-57, Organism=Drosophila melanogaster, GI24584399, Length=353, Percent_Identity=35.1274787535411, Blast_Score=218, Evalue=7e-57, Organism=Drosophila melanogaster, GI24642151, Length=354, Percent_Identity=35.3107344632768, Blast_Score=218, Evalue=7e-57, Organism=Drosophila melanogaster, GI21355075, Length=368, Percent_Identity=34.5108695652174, Blast_Score=214, Evalue=7e-56, Organism=Drosophila melanogaster, GI24644483, Length=381, Percent_Identity=32.5459317585302, Blast_Score=214, Evalue=7e-56, Organism=Drosophila melanogaster, GI24644487, Length=381, Percent_Identity=32.5459317585302, Blast_Score=214, Evalue=7e-56, Organism=Drosophila melanogaster, GI45551833, Length=381, Percent_Identity=32.5459317585302, Blast_Score=214, Evalue=7e-56, Organism=Drosophila melanogaster, GI24644485, Length=381, Percent_Identity=32.5459317585302, Blast_Score=214, Evalue=7e-56, Organism=Drosophila melanogaster, GI281361218, Length=381, Percent_Identity=32.5459317585302, Blast_Score=214, Evalue=9e-56, Organism=Drosophila melanogaster, GI24644481, Length=381, Percent_Identity=32.5459317585302, Blast_Score=214, Evalue=9e-56, Organism=Drosophila melanogaster, GI24644479, Length=381, Percent_Identity=32.5459317585302, Blast_Score=214, Evalue=1e-55, Organism=Drosophila melanogaster, GI24645031, Length=365, Percent_Identity=32.8767123287671, Blast_Score=209, Evalue=2e-54, Organism=Drosophila melanogaster, GI24583281, Length=367, Percent_Identity=34.8773841961853, Blast_Score=207, Evalue=1e-53, Organism=Drosophila melanogaster, GI24583279, Length=367, Percent_Identity=34.6049046321526, Blast_Score=207, Evalue=1e-53, Organism=Drosophila melanogaster, GI17985987, Length=379, Percent_Identity=34.3007915567282, Blast_Score=204, Evalue=9e-53, Organism=Drosophila melanogaster, GI28575014, Length=354, Percent_Identity=35.0282485875706, Blast_Score=204, Evalue=1e-52, Organism=Drosophila melanogaster, GI18857967, Length=368, Percent_Identity=32.0652173913043, Blast_Score=202, Evalue=3e-52, Organism=Drosophila melanogaster, GI24584994, Length=393, Percent_Identity=32.3155216284987, Blast_Score=196, Evalue=2e-50, Organism=Drosophila melanogaster, GI17977678, Length=362, Percent_Identity=33.1491712707182, Blast_Score=194, Evalue=7e-50, Organism=Drosophila melanogaster, GI17136814, Length=438, Percent_Identity=30.8219178082192, Blast_Score=182, Evalue=2e-46, Organism=Drosophila melanogaster, GI20130173, Length=474, Percent_Identity=31.2236286919831, Blast_Score=181, Evalue=9e-46, Organism=Drosophila melanogaster, GI24581954, Length=362, Percent_Identity=31.2154696132597, Blast_Score=179, Evalue=2e-45, Organism=Drosophila melanogaster, GI24581952, Length=362, Percent_Identity=31.2154696132597, Blast_Score=179, Evalue=2e-45, Organism=Drosophila melanogaster, GI24581956, Length=362, Percent_Identity=31.2154696132597, Blast_Score=179, Evalue=2e-45, Organism=Drosophila melanogaster, GI28571808, Length=373, Percent_Identity=30.0268096514745, Blast_Score=178, Evalue=6e-45, Organism=Drosophila melanogaster, GI28571809, Length=373, Percent_Identity=30.0268096514745, Blast_Score=178, Evalue=6e-45, Organism=Drosophila melanogaster, GI281365720, Length=303, Percent_Identity=34.6534653465347, Blast_Score=176, Evalue=2e-44, Organism=Drosophila melanogaster, GI24582080, Length=362, Percent_Identity=31.767955801105, Blast_Score=173, Evalue=2e-43, Organism=Drosophila melanogaster, GI24582078, Length=362, Percent_Identity=31.767955801105, Blast_Score=173, Evalue=2e-43, Organism=Drosophila melanogaster, GI17136248, Length=362, Percent_Identity=31.767955801105, Blast_Score=173, Evalue=2e-43, Organism=Drosophila melanogaster, GI24582075, Length=362, Percent_Identity=31.767955801105, Blast_Score=173, Evalue=2e-43, Organism=Drosophila melanogaster, GI24642822, Length=385, Percent_Identity=33.2467532467532, Blast_Score=172, Evalue=5e-43, Organism=Drosophila melanogaster, GI17647335, Length=364, Percent_Identity=31.043956043956, Blast_Score=169, Evalue=4e-42, Organism=Drosophila melanogaster, GI24643725, Length=411, Percent_Identity=31.6301703163017, Blast_Score=168, Evalue=7e-42, Organism=Drosophila melanogaster, GI21355559, Length=373, Percent_Identity=34.5844504021448, Blast_Score=168, Evalue=8e-42, Organism=Drosophila melanogaster, GI24666101, Length=400, Percent_Identity=29.5, Blast_Score=161, Evalue=8e-40, Organism=Drosophila melanogaster, GI18859659, Length=428, Percent_Identity=29.6728971962617, Blast_Score=140, Evalue=1e-33, Organism=Drosophila melanogaster, GI28571338, Length=428, Percent_Identity=29.6728971962617, Blast_Score=140, Evalue=1e-33, Organism=Drosophila melanogaster, GI17136666, Length=431, Percent_Identity=27.6102088167053, Blast_Score=134, Evalue=1e-31, Organism=Drosophila melanogaster, GI19920478, Length=363, Percent_Identity=29.7520661157025, Blast_Score=131, Evalue=8e-31, Organism=Drosophila melanogaster, GI24640164, Length=385, Percent_Identity=25.4545454545455, Blast_Score=124, Evalue=9e-29, Organism=Drosophila melanogaster, GI24668515, Length=348, Percent_Identity=26.7241379310345, Blast_Score=115, Evalue=4e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 47023; Mature: 47023
Theoretical pI: Translated: 10.26; Mature: 10.26
Prosite motif: PS00039 DEAD_ATP_HELICASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKTFADLDLSPNLLRALEEIGYQRPTQVQAMAIPEALEGKDILASAPTGTGKSAAFLLP CCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCHHHCCCCEEEECCCCCCCHHHHHHH ALQHLDDFPRRDPGPARVLILTPTRELAIQVADEARELAKYTHHKVFTITGGISYQEHAD HHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHH ILARTQDIVVATPGRLMEYIEAERFDCRAIETLILDEADRMLDMGFGPVVDRLSKECRWR HHHCCCCEEEECCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH KQTFLFSATLEGRGVDGFTADLLNEPAKIVAEPSRRERKKITQWYHRADSLPHKIELLKS HHHEEEEEEECCCCCCCHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHH ILTNQTERAIVFVKTRERLAELRGHLETAKISCAWLQGEMPQESRNNAISRFRDGKVNVL HHCCCCCCEEEEEECHHHHHHHHCCHHHHHEEEEEECCCCCHHHHHHHHHHHCCCCEEEE IATDVAARGIDLPDVSHVINFDMPRTADVYLHRIGRTARAGKKGNAVSLIEAHDQKMMER EEECHHHCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHH VGRYVKEEDEIIKERFVEGLKPTHKKAVFKNKQKKNAKKKAVLAKKNAPKKKKKKK HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCC >Mature Secondary Structure MIKTFADLDLSPNLLRALEEIGYQRPTQVQAMAIPEALEGKDILASAPTGTGKSAAFLLP CCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCHHHCCCCEEEECCCCCCCHHHHHHH ALQHLDDFPRRDPGPARVLILTPTRELAIQVADEARELAKYTHHKVFTITGGISYQEHAD HHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHH ILARTQDIVVATPGRLMEYIEAERFDCRAIETLILDEADRMLDMGFGPVVDRLSKECRWR HHHCCCCEEEECCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH KQTFLFSATLEGRGVDGFTADLLNEPAKIVAEPSRRERKKITQWYHRADSLPHKIELLKS HHHEEEEEEECCCCCCCHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHH ILTNQTERAIVFVKTRERLAELRGHLETAKISCAWLQGEMPQESRNNAISRFRDGKVNVL HHCCCCCCEEEEEECHHHHHHHHCCHHHHHEEEEEECCCCCHHHHHHHHHHHCCCCEEEE IATDVAARGIDLPDVSHVINFDMPRTADVYLHRIGRTARAGKKGNAVSLIEAHDQKMMER EEECHHHCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHH VGRYVKEEDEIIKERFVEGLKPTHKKAVFKNKQKKNAKKKAVLAKKNAPKKKKKKK HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]