Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is 209694146

Identifier: 209694146

GI number: 209694146

Start: 605512

End: 605667

Strand: Reverse

Name: 209694146

Synonym: VSAL_I0553

Alternate gene names: NA

Gene position: 605667-605512 (Counterclockwise)

Preceding gene: 209694151

Following gene: 209694145

Centisome position: 18.21

GC content: 33.33

Gene sequence:

>156_bases
TTGTCGCAAAGCCTAATAGTGACTGCAAACGTTTACTTAGCAAATAAAGTGCTTTTTTTCACGATTTTGACAGAAAACCT
TGTTTCTGTAGATAAATCCAATTGCAGAACGCAAACGATTGGTTATGTCTTATATTTATTTTCTTACCCCAAATGA

Upstream 100 bases:

>100_bases
GCCTGCTCCTGAGAATTCGAAGGACTATATATTTATTGAGCTAGTTAACTCTTGATTAGTTACCCATATTTATGGATTAA
CTTAAATTTGCAGCGCCGTA

Downstream 100 bases:

>100_bases
GTTGTAATTAATCAAATTTTCTCTATTATGGCCGTCTAGATGGAAGAACACCTACACTGTTAAACGTATAGACTTATATA
TACTGTGGGTATTTTCTAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 51; Mature: 50

Protein sequence:

>51_residues
MSQSLIVTANVYLANKVLFFTILTENLVSVDKSNCRTQTIGYVLYLFSYPK

Sequences:

>Translated_51_residues
MSQSLIVTANVYLANKVLFFTILTENLVSVDKSNCRTQTIGYVLYLFSYPK
>Mature_50_residues
SQSLIVTANVYLANKVLFFTILTENLVSVDKSNCRTQTIGYVLYLFSYPK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 5808; Mature: 5677

Theoretical pI: Translated: 9.11; Mature: 9.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQSLIVTANVYLANKVLFFTILTENLVSVDKSNCRTQTIGYVLYLFSYPK
CCCCEEEEEEEEEHHHEEEEEEHHHHHHHCCCCCCCHHHHEEEEEEEECCC
>Mature Secondary Structure 
SQSLIVTANVYLANKVLFFTILTENLVSVDKSNCRTQTIGYVLYLFSYPK
CCCEEEEEEEEEHHHEEEEEEHHHHHHHCCCCCCCHHHHEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA