| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
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The map label for this gene is mlaC [H]
Identifier: 209694103
GI number: 209694103
Start: 565801
End: 566442
Strand: Direct
Name: mlaC [H]
Synonym: VSAL_I0508
Alternate gene names: 209694103
Gene position: 565801-566442 (Clockwise)
Preceding gene: 209694102
Following gene: 209694104
Centisome position: 17.02
GC content: 37.85
Gene sequence:
>642_bases ATGAAGTTAGGGATGAAAATCGTAGGGATCATACTTTCCCTTTTTATTGGTGTCGCTCAAGCTGAACCGATTGATAAAAC CAAACCTTATGAAATGATGACAAAAGTCTCTGAAGACACTTTTGCTCGATTAAAAGCAGAGCAAGTCGCTATTCAAAAAG ATCCCAATATATTAAAAACGGTCGTTGAAGAAGAATTGATGCCGTACGTTAATGTAAAGTATGCCGCGTATAAATTACTT GGGCCTCATCTAAAGAAAACCACGGCAGCAGAAAGAGAACAATTTGTGACGGCTTTTCGTGGCTACCTCGTGTCGTCATA CGCTCAAGTATTAACGTTATATACTGATCAAAAAATCGAATTAGAGAAGCCAAAAGCGATTCCTGAAAAAAAATCTATCA TTAGTGTTCGTGTTGATATTCTTGATTCAGCTCGTCCAACGGTAAAAGTAGATTTTAAATTACGTAAGAATAAGAAAACA TCAGAGTGGCAAGCATTTGATATGGTAGCGGAAGGCGTGAGCTTATTATCGACAAAGCAATCTGAATGGAGTGCTAAGAT TCGTAAAGAAGGCATTGAGTCAGTCAGTAAAGAATTAACCTCATTAGCCGCTCAACCTATTCGCTTAGAAGGAAGTAAGT AA
Upstream 100 bases:
>100_bases ACATTGAAGACACCAAATCAGCATTAGTATTAGAAGATATGATAGGGCAAGTGCTGTATAGCATTGGTGGTGATTCATCA GAAAAAAGTGAGGATAAATA
Downstream 100 bases:
>100_bases TGAGCGAAATGGATTTATGTGAGGCTAAATCTGATGAAATTAGCTTCAAAGGGACGCTTGATCGTGAGACTGTGCCTAAT CTTTGGAATAAATTGACAGA
Product: toluene tolerance protein Ttg2
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 213; Mature: 213
Protein sequence:
>213_residues MKLGMKIVGIILSLFIGVAQAEPIDKTKPYEMMTKVSEDTFARLKAEQVAIQKDPNILKTVVEEELMPYVNVKYAAYKLL GPHLKKTTAAEREQFVTAFRGYLVSSYAQVLTLYTDQKIELEKPKAIPEKKSIISVRVDILDSARPTVKVDFKLRKNKKT SEWQAFDMVAEGVSLLSTKQSEWSAKIRKEGIESVSKELTSLAAQPIRLEGSK
Sequences:
>Translated_213_residues MKLGMKIVGIILSLFIGVAQAEPIDKTKPYEMMTKVSEDTFARLKAEQVAIQKDPNILKTVVEEELMPYVNVKYAAYKLL GPHLKKTTAAEREQFVTAFRGYLVSSYAQVLTLYTDQKIELEKPKAIPEKKSIISVRVDILDSARPTVKVDFKLRKNKKT SEWQAFDMVAEGVSLLSTKQSEWSAKIRKEGIESVSKELTSLAAQPIRLEGSK >Mature_213_residues MKLGMKIVGIILSLFIGVAQAEPIDKTKPYEMMTKVSEDTFARLKAEQVAIQKDPNILKTVVEEELMPYVNVKYAAYKLL GPHLKKTTAAEREQFVTAFRGYLVSSYAQVLTLYTDQKIELEKPKAIPEKKSIISVRVDILDSARPTVKVDFKLRKNKKT SEWQAFDMVAEGVSLLSTKQSEWSAKIRKEGIESVSKELTSLAAQPIRLEGSK
Specific function: Actively prevents phospholipid accumulation at the cell surface. Probably maintains lipid asymmetry in the outer membrane by retrograde trafficking of phospholipids from the outer membrane to the inner membrane. May transfer phospholipid across the peripl
COG id: COG2854
COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, auxiliary component
Gene ontology:
Cell location: Periplasm (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mlaC/ttg2D family [H]
Homologues:
Organism=Escherichia coli, GI1789583, Length=209, Percent_Identity=40.6698564593301, Blast_Score=180, Evalue=6e-47,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023094 - InterPro: IPR008869 [H]
Pfam domain/function: PF05494 Tol_Tol_Ttg2 [H]
EC number: NA
Molecular weight: Translated: 23982; Mature: 23982
Theoretical pI: Translated: 10.02; Mature: 10.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLGMKIVGIILSLFIGVAQAEPIDKTKPYEMMTKVSEDTFARLKAEQVAIQKDPNILKT CCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH VVEEELMPYVNVKYAAYKLLGPHLKKTTAAEREQFVTAFRGYLVSSYAQVLTLYTDQKIE HHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE LEKPKAIPEKKSIISVRVDILDSARPTVKVDFKLRKNKKTSEWQAFDMVAEGVSLLSTKQ CCCCCCCCCCHHEEEEEEEHHCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCH SEWSAKIRKEGIESVSKELTSLAAQPIRLEGSK HHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCC >Mature Secondary Structure MKLGMKIVGIILSLFIGVAQAEPIDKTKPYEMMTKVSEDTFARLKAEQVAIQKDPNILKT CCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH VVEEELMPYVNVKYAAYKLLGPHLKKTTAAEREQFVTAFRGYLVSSYAQVLTLYTDQKIE HHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE LEKPKAIPEKKSIISVRVDILDSARPTVKVDFKLRKNKKTSEWQAFDMVAEGVSLLSTKQ CCCCCCCCCCHHEEEEEEEHHCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCH SEWSAKIRKEGIESVSKELTSLAAQPIRLEGSK HHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]