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The map label for this gene is yrbD [C]

Identifier: 209694102

GI number: 209694102

Start: 565307

End: 565801

Strand: Direct

Name: yrbD [C]

Synonym: VSAL_I0507

Alternate gene names: 209694102

Gene position: 565307-565801 (Clockwise)

Preceding gene: 209694101

Following gene: 209694103

Centisome position: 17.0

GC content: 40.2

Gene sequence:

>495_bases
ATGCAGCAAACACGTAAAATAGAATTATTAGTTGGATTTTTTGTTTTGGCTGGCGCGGCAGCGTTATTAATGTTGCTACT
AAAAGTGGCCGATGTTCGTAGTGGTGGCAGTGGAGAGTACTACACTATTAATGCACAGTTCGATAATATCGGCAGCTTAA
AGTCTCGCTCACCGGTTAAAATCGGGGGCGTTGTTGTCGGCCGTGTTTCCGGTATTACATTAGATATCGAAAGCTACTTA
CCGGTTGTCAGTATGCAAATTGATAAACAATTTGGCCAATTTCCTGAAACTTCTGCGGCACAAATTTTAACCGCCGGATT
AATTGGTGAACAATATGTAGGTATCGTTCCTGGTTTTATTGATGAAGACATTGATATGCTTGGTGAGGGTGACTACATTG
AAGACACCAAATCAGCATTAGTATTAGAAGATATGATAGGGCAAGTGCTGTATAGCATTGGTGGTGATTCATCAGAAAAA
AGTGAGGATAAATAA

Upstream 100 bases:

>100_bases
AAGGGATCTCATTAGCAACAACACGAACGGTAGTGCATTCGTCACTGGCGGTATTAGGAATTGATTTTGTGCTTACAGCA
CTGATGTTTGGGAATTAATC

Downstream 100 bases:

>100_bases
TGAAGTTAGGGATGAAAATCGTAGGGATCATACTTTCCCTTTTTATTGGTGTCGCTCAAGCTGAACCGATTGATAAAACC
AAACCTTATGAAATGATGAC

Product: toluene tolerance protein Ttg2C

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 164; Mature: 164

Protein sequence:

>164_residues
MQQTRKIELLVGFFVLAGAAALLMLLLKVADVRSGGSGEYYTINAQFDNIGSLKSRSPVKIGGVVVGRVSGITLDIESYL
PVVSMQIDKQFGQFPETSAAQILTAGLIGEQYVGIVPGFIDEDIDMLGEGDYIEDTKSALVLEDMIGQVLYSIGGDSSEK
SEDK

Sequences:

>Translated_164_residues
MQQTRKIELLVGFFVLAGAAALLMLLLKVADVRSGGSGEYYTINAQFDNIGSLKSRSPVKIGGVVVGRVSGITLDIESYL
PVVSMQIDKQFGQFPETSAAQILTAGLIGEQYVGIVPGFIDEDIDMLGEGDYIEDTKSALVLEDMIGQVLYSIGGDSSEK
SEDK
>Mature_164_residues
MQQTRKIELLVGFFVLAGAAALLMLLLKVADVRSGGSGEYYTINAQFDNIGSLKSRSPVKIGGVVVGRVSGITLDIESYL
PVVSMQIDKQFGQFPETSAAQILTAGLIGEQYVGIVPGFIDEDIDMLGEGDYIEDTKSALVLEDMIGQVLYSIGGDSSEK
SEDK

Specific function: Could be part of an ABC transporter complex [H]

COG id: COG1463

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, periplasmic component

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaD family [H]

Homologues:

Organism=Escherichia coli, GI1789584, Length=163, Percent_Identity=51.5337423312883, Blast_Score=154, Evalue=3e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003399 [H]

Pfam domain/function: PF02470 MCE [H]

EC number: NA

Molecular weight: Translated: 17543; Mature: 17543

Theoretical pI: Translated: 4.05; Mature: 4.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQTRKIELLVGFFVLAGAAALLMLLLKVADVRSGGSGEYYTINAQFDNIGSLKSRSPVK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCEE
IGGVVVGRVSGITLDIESYLPVVSMQIDKQFGQFPETSAAQILTAGLIGEQYVGIVPGFI
ECCEEEEECCCEEEEHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHCCCCCC
DEDIDMLGEGDYIEDTKSALVLEDMIGQVLYSIGGDSSEKSEDK
CCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MQQTRKIELLVGFFVLAGAAALLMLLLKVADVRSGGSGEYYTINAQFDNIGSLKSRSPVK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCEE
IGGVVVGRVSGITLDIESYLPVVSMQIDKQFGQFPETSAAQILTAGLIGEQYVGIVPGFI
ECCEEEEECCCEEEEHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHCCCCCC
DEDIDMLGEGDYIEDTKSALVLEDMIGQVLYSIGGDSSEKSEDK
CCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]