| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
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The map label for this gene is mlaE [H]
Identifier: 209694101
GI number: 209694101
Start: 564510
End: 565304
Strand: Direct
Name: mlaE [H]
Synonym: VSAL_I0506
Alternate gene names: 209694101
Gene position: 564510-565304 (Clockwise)
Preceding gene: 209694100
Following gene: 209694102
Centisome position: 16.98
GC content: 43.4
Gene sequence:
>795_bases GTGAGTAATTTCTCTTTAATCTTATTTGTTGAAAATATTGGTAAGCGAGCGCTTTCAACGTGCGAAGCTATTGGTCGAGC GACTTTTATGCTTTTTGGGGCGATCATTGCAAAGCCTCAACCCGTAAGAATGTTTCCATTGTTATTGCAACAGCTGTATT CAGTCGGTGTGTTATCGCTTGTTATTATCGTGGTCTCTGGGCTGTTTATCGGCATGGTGATAAGCCTTCAAGGTTATGTG ATTTTAGTCGATTACGGTGCAGAAACCAGTCTCGGCCAATTGGTGTCACTTTCGTTATTACGTGAATTAGGCCCTGTGGT TACCGCACTCTTATTTGCTGGGCGTGCCGGCTCTGCATTAACTGCAGAAATAGGGTTAATGAAAACGACAGAGCAGTTGT CTAGTATGGAAATGATGGCGATAGATCCTTTGCGTCGTATTATTGCCCCGCGCTTATGGGCGGGTGTTATTTCAATGCCA TTACTGGCGATGATTTTTATGGCTGTGGGTATATGGGGTGGTCAAATTGTTGGTGTTGAATGGAAAGGTATTGATCACGG AAGCTTTTGGTCAGTAATGCAAGCATCGGTCGATGTACGCCACGACATTGTTAACAGTTTAATTAAGTGTGTCGTGTTTG CGTTTGTCGTGACATGGATTGCTTTATTTAATGGCTATGATGCGACCCCAACATCAGAAGGGATCTCATTAGCAACAACA CGAACGGTAGTGCATTCGTCACTGGCGGTATTAGGAATTGATTTTGTGCTTACAGCACTGATGTTTGGGAATTAA
Upstream 100 bases:
>100_bases AATCCAGACCCTCAAGTACGACAATTTTTAGATGGCCGCTCTGACGGACCCGTTCCTTTTCGCTTTCCGTCGAAACCATT AGTTGAGGAGTTATTTCCTG
Downstream 100 bases:
>100_bases TCATGCAGCAAACACGTAAAATAGAATTATTAGTTGGATTTTTTGTTTTGGCTGGCGCGGCAGCGTTATTAATGTTGCTA CTAAAAGTGGCCGATGTTCG
Product: toluene tolerance protein Ttg2B
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 264; Mature: 263
Protein sequence:
>264_residues MSNFSLILFVENIGKRALSTCEAIGRATFMLFGAIIAKPQPVRMFPLLLQQLYSVGVLSLVIIVVSGLFIGMVISLQGYV ILVDYGAETSLGQLVSLSLLRELGPVVTALLFAGRAGSALTAEIGLMKTTEQLSSMEMMAIDPLRRIIAPRLWAGVISMP LLAMIFMAVGIWGGQIVGVEWKGIDHGSFWSVMQASVDVRHDIVNSLIKCVVFAFVVTWIALFNGYDATPTSEGISLATT RTVVHSSLAVLGIDFVLTALMFGN
Sequences:
>Translated_264_residues MSNFSLILFVENIGKRALSTCEAIGRATFMLFGAIIAKPQPVRMFPLLLQQLYSVGVLSLVIIVVSGLFIGMVISLQGYV ILVDYGAETSLGQLVSLSLLRELGPVVTALLFAGRAGSALTAEIGLMKTTEQLSSMEMMAIDPLRRIIAPRLWAGVISMP LLAMIFMAVGIWGGQIVGVEWKGIDHGSFWSVMQASVDVRHDIVNSLIKCVVFAFVVTWIALFNGYDATPTSEGISLATT RTVVHSSLAVLGIDFVLTALMFGN >Mature_263_residues SNFSLILFVENIGKRALSTCEAIGRATFMLFGAIIAKPQPVRMFPLLLQQLYSVGVLSLVIIVVSGLFIGMVISLQGYVI LVDYGAETSLGQLVSLSLLRELGPVVTALLFAGRAGSALTAEIGLMKTTEQLSSMEMMAIDPLRRIIAPRLWAGVISMPL LAMIFMAVGIWGGQIVGVEWKGIDHGSFWSVMQASVDVRHDIVNSLIKCVVFAFVVTWIALFNGYDATPTSEGISLATTR TVVHSSLAVLGIDFVLTALMFGN
Specific function: Part of the ABC transporter complex mlaFEDB that actively prevents phospholipid accumulation at the cell surface. Probably maintains lipid asymmetry in the outer membrane by retrograde trafficking of phospholipids from the outer membrane to the inner memb
COG id: COG0767
COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mlaE permease family [H]
Homologues:
Organism=Escherichia coli, GI1789585, Length=253, Percent_Identity=72.7272727272727, Blast_Score=374, Evalue=1e-105,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003453 [H]
Pfam domain/function: PF02405 DUF140 [H]
EC number: NA
Molecular weight: Translated: 28415; Mature: 28284
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNFSLILFVENIGKRALSTCEAIGRATFMLFGAIIAKPQPVRMFPLLLQQLYSVGVLSL CCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH VIIVVSGLFIGMVISLQGYVILVDYGAETSLGQLVSLSLLRELGPVVTALLFAGRAGSAL HHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH TAEIGLMKTTEQLSSMEMMAIDPLRRIIAPRLWAGVISMPLLAMIFMAVGIWGGQIVGVE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE WKGIDHGSFWSVMQASVDVRHDIVNSLIKCVVFAFVVTWIALFNGYDATPTSEGISLATT ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH RTVVHSSLAVLGIDFVLTALMFGN HHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SNFSLILFVENIGKRALSTCEAIGRATFMLFGAIIAKPQPVRMFPLLLQQLYSVGVLSL CCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH VIIVVSGLFIGMVISLQGYVILVDYGAETSLGQLVSLSLLRELGPVVTALLFAGRAGSAL HHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH TAEIGLMKTTEQLSSMEMMAIDPLRRIIAPRLWAGVISMPLLAMIFMAVGIWGGQIVGVE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE WKGIDHGSFWSVMQASVDVRHDIVNSLIKCVVFAFVVTWIALFNGYDATPTSEGISLATT ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH RTVVHSSLAVLGIDFVLTALMFGN HHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]