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The map label for this gene is yhdE [C]

Identifier: 209694081

GI number: 209694081

Start: 543428

End: 544003

Strand: Direct

Name: yhdE [C]

Synonym: VSAL_I0486

Alternate gene names: 209694081

Gene position: 543428-544003 (Clockwise)

Preceding gene: 209694080

Following gene: 209694082

Centisome position: 16.34

GC content: 39.76

Gene sequence:

>576_bases
ATGTCGAATCAATTATTTTTAGCATCTGGTTCTCCACGTAGAAAGGAACTGCTGCAACAGTTAGGGTATCAGTTTGAGAT
AGTTACTGTTGACGTTGAAGAACAGCATCAGTCTCATGAATCCCCTTTAGAATATGTTGAACGATTATCTAAAGATAAAG
CTCAAGCGGGTTTGCGTGTAGTCGAACAAAATAAAAATACAATTGTCCCAGTATTGGGCTCTGATACTATTGTTGTAATC
GATGGTGTTATTTTAGAAAAACCAACAGATTTTGAAGATGCTAAGAGAATGCTCTTGGCACTGTCTGGTCGTCAACATCA
AGTTATGACTGCTGTCACCCTTATGACTCCTGAAAAAACAAGAACCAAAACAGTAATTACTCAGGTGTGGTTTAAAACAC
TCTCAGAACAAGAAATTAAAACGTATTGGGAGAGTGGAGAGCCTTGTGATAAAGCAGGTTCGTATGGCATTCAGGGTAGT
GGTGGGCGATTTGTCTCACGTATTGATGGCAGCTATCACGCTGTCATGGGATTGCCATTGATGGAAACCGATCAGCTCTT
ACACCAATTTTTGTAA

Upstream 100 bases:

>100_bases
TTTTTTATGGGCGGGCGTGTTAAACTTTATTTTGTGGCCTTGGTTATTTTTATTGATGCGTAGAGTTCGCCGTCATTGGT
CTATTCGATAAGGAAGTAAA

Downstream 100 bases:

>100_bases
AAATTAGTGAGGTGCTCCAATGAGTACAGAGTTGTTAATAAACGTAACTCCGAGTGAAACTCGAGTTGCGATGATTGAAG
CCGGTGTGCTTCAAGAGATA

Product: Maf-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 191; Mature: 190

Protein sequence:

>191_residues
MSNQLFLASGSPRRKELLQQLGYQFEIVTVDVEEQHQSHESPLEYVERLSKDKAQAGLRVVEQNKNTIVPVLGSDTIVVI
DGVILEKPTDFEDAKRMLLALSGRQHQVMTAVTLMTPEKTRTKTVITQVWFKTLSEQEIKTYWESGEPCDKAGSYGIQGS
GGRFVSRIDGSYHAVMGLPLMETDQLLHQFL

Sequences:

>Translated_191_residues
MSNQLFLASGSPRRKELLQQLGYQFEIVTVDVEEQHQSHESPLEYVERLSKDKAQAGLRVVEQNKNTIVPVLGSDTIVVI
DGVILEKPTDFEDAKRMLLALSGRQHQVMTAVTLMTPEKTRTKTVITQVWFKTLSEQEIKTYWESGEPCDKAGSYGIQGS
GGRFVSRIDGSYHAVMGLPLMETDQLLHQFL
>Mature_190_residues
SNQLFLASGSPRRKELLQQLGYQFEIVTVDVEEQHQSHESPLEYVERLSKDKAQAGLRVVEQNKNTIVPVLGSDTIVVID
GVILEKPTDFEDAKRMLLALSGRQHQVMTAVTLMTPEKTRTKTVITQVWFKTLSEQEIKTYWESGEPCDKAGSYGIQGSG
GRFVSRIDGSYHAVMGLPLMETDQLLHQFL

Specific function: Unknown

COG id: COG0424

COG function: function code D; Nucleotide-binding protein implicated in inhibition of septum formation

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the maf family [H]

Homologues:

Organism=Homo sapiens, GI117553627, Length=191, Percent_Identity=39.7905759162304, Blast_Score=125, Evalue=2e-29,
Organism=Homo sapiens, GI291045183, Length=190, Percent_Identity=37.8947368421053, Blast_Score=107, Evalue=6e-24,
Organism=Homo sapiens, GI291045181, Length=118, Percent_Identity=46.6101694915254, Blast_Score=99, Evalue=3e-21,
Organism=Homo sapiens, GI310133124, Length=118, Percent_Identity=46.6101694915254, Blast_Score=98, Evalue=5e-21,
Organism=Escherichia coli, GI1789646, Length=186, Percent_Identity=54.8387096774194, Blast_Score=197, Evalue=3e-52,
Organism=Escherichia coli, GI87081830, Length=189, Percent_Identity=33.3333333333333, Blast_Score=91, Evalue=6e-20,
Organism=Caenorhabditis elegans, GI193202443, Length=186, Percent_Identity=35.4838709677419, Blast_Score=99, Evalue=2e-21,
Organism=Saccharomyces cerevisiae, GI6324685, Length=213, Percent_Identity=29.1079812206573, Blast_Score=67, Evalue=2e-12,
Organism=Drosophila melanogaster, GI78706856, Length=182, Percent_Identity=40.1098901098901, Blast_Score=127, Evalue=5e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003697 [H]

Pfam domain/function: PF02545 Maf [H]

EC number: NA

Molecular weight: Translated: 21496; Mature: 21365

Theoretical pI: Translated: 5.64; Mature: 5.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNQLFLASGSPRRKELLQQLGYQFEIVTVDVEEQHQSHESPLEYVERLSKDKAQAGLRV
CCCCEEEECCCCHHHHHHHHCCCEEEEEEEEHHHHHCCCCCHHHHHHHHHHHHHHHHHEE
VEQNKNTIVPVLGSDTIVVIDGVILEKPTDFEDAKRMLLALSGRQHQVMTAVTLMTPEKT
EECCCCEEEEEECCCEEEEEECEEECCCCCHHHHHHHHHHHCCCCCEEEEEEEEECCCCH
RTKTVITQVWFKTLSEQEIKTYWESGEPCDKAGSYGIQGSGGRFVSRIDGSYHAVMGLPL
HHHHHHHHHHHHHHCHHHHHHHHCCCCCHHHCCCCCCCCCCCCEEEECCCCEEEEECCCC
METDQLLHQFL
HHHHHHHHHHC
>Mature Secondary Structure 
SNQLFLASGSPRRKELLQQLGYQFEIVTVDVEEQHQSHESPLEYVERLSKDKAQAGLRV
CCCEEEECCCCHHHHHHHHCCCEEEEEEEEHHHHHCCCCCHHHHHHHHHHHHHHHHHEE
VEQNKNTIVPVLGSDTIVVIDGVILEKPTDFEDAKRMLLALSGRQHQVMTAVTLMTPEKT
EECCCCEEEEEECCCEEEEEECEEECCCCCHHHHHHHHHHHCCCCCEEEEEEEEECCCCH
RTKTVITQVWFKTLSEQEIKTYWESGEPCDKAGSYGIQGSGGRFVSRIDGSYHAVMGLPL
HHHHHHHHHHHHHHCHHHHHHHHCCCCCHHHCCCCCCCCCCCCEEEECCCCEEEEECCCC
METDQLLHQFL
HHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA