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The map label for this gene is mshF

Identifier: 209694070

GI number: 209694070

Start: 531636

End: 532088

Strand: Direct

Name: mshF

Synonym: VSAL_I0474

Alternate gene names: NA

Gene position: 531636-532088 (Clockwise)

Preceding gene: 209694069

Following gene: 209694071

Centisome position: 15.99

GC content: 35.1

Gene sequence:

>453_bases
ATGGTGTCATCGTCCCGAATTATGTGGGGGACAATATTCGTTATTCTGTTAGCTACGATTATGTGGCAATGGAATAAAAT
GGAACCCGAAGTTGAAAATGCAGCCTTGATTATGACAAGTCGAGATATATTGTCATCGGCAAATGAATATAGAAATTATT
GGGTAGTGAGTGGAGAACCAGCATCAATTCAGAAAGAGGGAATTAATGTTCAATTCTCTGCATTAGGCTGGCCGATTGTT
TTTAATGATGGGAAGCTTGATTGCCGAGCTTGGTTAACTCTGTTATTACCTGAGAAGAAAACGATTTACACAGATAGCAT
AACAATAACTCATGAAATAAAAGAAAGTAATTACAACCGTTGTAACTATGGTATAGCGGATGGTAAAATGATTTCGGTTA
TGTTAATTAATGACATCTTTAAAGTTAACGTTATTTTTTCTGAAACGAAATAA

Upstream 100 bases:

>100_bases
AGCCTTTACTTTTGGTTGTTGTGGCCGGAATGGTCTTAATTTTAGCGTTGGGTATTTTCTTACCAATGTGGAATATGTTG
GATGTAGTGAAGGGTTCATA

Downstream 100 bases:

>100_bases
AGTTAATGATTTTTGACGAGCGCTGTGTTTTTTTTTGTATAATCCCTTACAATTCACGAAGAAAATAAGATAGAGAGAAG
CATGATTATGAAGCGTCAAA

Product: type IV pilus, mannose-sensitive hemagglutinin protein MshF

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 150; Mature: 150

Protein sequence:

>150_residues
MVSSSRIMWGTIFVILLATIMWQWNKMEPEVENAALIMTSRDILSSANEYRNYWVVSGEPASIQKEGINVQFSALGWPIV
FNDGKLDCRAWLTLLLPEKKTIYTDSITITHEIKESNYNRCNYGIADGKMISVMLINDIFKVNVIFSETK

Sequences:

>Translated_150_residues
MVSSSRIMWGTIFVILLATIMWQWNKMEPEVENAALIMTSRDILSSANEYRNYWVVSGEPASIQKEGINVQFSALGWPIV
FNDGKLDCRAWLTLLLPEKKTIYTDSITITHEIKESNYNRCNYGIADGKMISVMLINDIFKVNVIFSETK
>Mature_150_residues
MVSSSRIMWGTIFVILLATIMWQWNKMEPEVENAALIMTSRDILSSANEYRNYWVVSGEPASIQKEGINVQFSALGWPIV
FNDGKLDCRAWLTLLLPEKKTIYTDSITITHEIKESNYNRCNYGIADGKMISVMLINDIFKVNVIFSETK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17176; Mature: 17176

Theoretical pI: Translated: 5.20; Mature: 5.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSSSRIMWGTIFVILLATIMWQWNKMEPEVENAALIMTSRDILSSANEYRNYWVVSGEP
CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECHHHHHCHHHHCCEEEECCCC
ASIQKEGINVQFSALGWPIVFNDGKLDCRAWLTLLLPEKKTIYTDSITITHEIKESNYNR
CCCHHCCCCEEEEECCCEEEEECCCCCHHEEEEEECCCCCEEEECCEEEEEEECCCCCCC
CNYGIADGKMISVMLINDIFKVNVIFSETK
CCCCCCCCCEEEEEEECCEEEEEEEEECCC
>Mature Secondary Structure
MVSSSRIMWGTIFVILLATIMWQWNKMEPEVENAALIMTSRDILSSANEYRNYWVVSGEP
CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECHHHHHCHHHHCCEEEECCCC
ASIQKEGINVQFSALGWPIVFNDGKLDCRAWLTLLLPEKKTIYTDSITITHEIKESNYNR
CCCHHCCCCEEEEECCCEEEEECCCCCHHEEEEEECCCCCEEEECCEEEEEEECCCCCCC
CNYGIADGKMISVMLINDIFKVNVIFSETK
CCCCCCCCCEEEEEEECCEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA