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The map label for this gene is mshB

Identifier: 209694071

GI number: 209694071

Start: 532170

End: 532739

Strand: Direct

Name: mshB

Synonym: VSAL_I0475

Alternate gene names: NA

Gene position: 532170-532739 (Clockwise)

Preceding gene: 209694070

Following gene: 209694072

Centisome position: 16.0

GC content: 41.23

Gene sequence:

>570_bases
ATGATTATGAAGCGTCAAAAAGGTTTCTCACTGGTTGAGCTAGTGATCGTTATTGTTGTTATCGGTTTGCTGGCGACAGT
GGCGTTACCACGATTTTTAGATGTCAGTCTCGAAGCGAAAAAAGCGAGTGTTGAAGGGGTTGCAGGTGGTTATGCAACTG
CTGTACTCTCCGCAAGAGCGCAGTGGGAAGCAGAAGCGAGACCTAAAATTGACGGTTATAATGCAGTAAGTTATGACGGA
ACTGAGTTCTGGCTAACGGATCCTTCTCAAGCAAATCAGTCTGATTTTCGTCCGGGTTACCCGATGGCACCAAGAGAAGA
TTTAGATGGGGCAACAACAGGCGGTTATCCTTCAGAATTAACATCGAAAGAATGTATTTTATTAATGGAAATGTTATTAC
AAAATGCCCCTTATGTAACCGATGATGCTAAGGATGAAAAAGCGAAATATTTAGCGGAAATTATTACTGATAATAGCCGT
AAGCAATGTAAATATACTCAACAAGAGAATGAAGGGCACTTCTTTACTTATGAACCAGAGAGTGGCCGAGTTGTAGTTAC
CTTACAATAA

Upstream 100 bases:

>100_bases
TTTTTCTGAAACGAAATAAAGTTAATGATTTTTGACGAGCGCTGTGTTTTTTTTTGTATAATCCCTTACAATTCACGAAG
AAAATAAGATAGAGAGAAGC

Downstream 100 bases:

>100_bases
TAATTAATTTAAATACCAATGCAGGGTTATTTATTGATCGTGCGTTGGTAAGTAAATAAGTTTTAAATATATCAATGTGT
ATATATTCGATTTCATAATA

Product: type IV pilus, prepilin-like protein (MSHB)

Products: NA

Alternate protein names: Msha Pilin Protein Mshb; Pilin Protein; Prepilin-Type Cleavage/Methylation; Type IV Pilus Prepilin-Like Protein

Number of amino acids: Translated: 189; Mature: 189

Protein sequence:

>189_residues
MIMKRQKGFSLVELVIVIVVIGLLATVALPRFLDVSLEAKKASVEGVAGGYATAVLSARAQWEAEARPKIDGYNAVSYDG
TEFWLTDPSQANQSDFRPGYPMAPREDLDGATTGGYPSELTSKECILLMEMLLQNAPYVTDDAKDEKAKYLAEIITDNSR
KQCKYTQQENEGHFFTYEPESGRVVVTLQ

Sequences:

>Translated_189_residues
MIMKRQKGFSLVELVIVIVVIGLLATVALPRFLDVSLEAKKASVEGVAGGYATAVLSARAQWEAEARPKIDGYNAVSYDG
TEFWLTDPSQANQSDFRPGYPMAPREDLDGATTGGYPSELTSKECILLMEMLLQNAPYVTDDAKDEKAKYLAEIITDNSR
KQCKYTQQENEGHFFTYEPESGRVVVTLQ
>Mature_189_residues
MIMKRQKGFSLVELVIVIVVIGLLATVALPRFLDVSLEAKKASVEGVAGGYATAVLSARAQWEAEARPKIDGYNAVSYDG
TEFWLTDPSQANQSDFRPGYPMAPREDLDGATTGGYPSELTSKECILLMEMLLQNAPYVTDDAKDEKAKYLAEIITDNSR
KQCKYTQQENEGHFFTYEPESGRVVVTLQ

Specific function: Unknown

COG id: COG2165

COG function: function code NU; Type II secretory pathway, pseudopilin PulG

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20910; Mature: 20910

Theoretical pI: Translated: 4.49; Mature: 4.49

Prosite motif: PS00409 PROKAR_NTER_METHYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIMKRQKGFSLVELVIVIVVIGLLATVALPRFLDVSLEAKKASVEGVAGGYATAVLSARA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCHHHHHHHHHHH
QWEAEARPKIDGYNAVSYDGTEFWLTDPSQANQSDFRPGYPMAPREDLDGATTGGYPSEL
HCCCCCCCCCCCCCEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TSKECILLMEMLLQNAPYVTDDAKDEKAKYLAEIITDNSRKQCKYTQQENEGHFFTYEPE
CHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCHHHCCCCCCCCCCCEEEECCC
SGRVVVTLQ
CCEEEEEEC
>Mature Secondary Structure
MIMKRQKGFSLVELVIVIVVIGLLATVALPRFLDVSLEAKKASVEGVAGGYATAVLSARA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCHHHHHHHHHHH
QWEAEARPKIDGYNAVSYDGTEFWLTDPSQANQSDFRPGYPMAPREDLDGATTGGYPSEL
HCCCCCCCCCCCCCEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TSKECILLMEMLLQNAPYVTDDAKDEKAKYLAEIITDNSRKQCKYTQQENEGHFFTYEPE
CHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCHHHCCCCCCCCCCCEEEECCC
SGRVVVTLQ
CCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA