The gene/protein map for NC_006360 is currently unavailable.
Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is 209694048

Identifier: 209694048

GI number: 209694048

Start: 504688

End: 505092

Strand: Reverse

Name: 209694048

Synonym: VSAL_I0449

Alternate gene names: NA

Gene position: 505092-504688 (Counterclockwise)

Preceding gene: 209694049

Following gene: 209694047

Centisome position: 15.19

GC content: 33.09

Gene sequence:

>405_bases
ATGGATAAAAAACAACAGAGACTCATCGCTAATTTTTATTCAGCATTAGATGGAAATATTTCAAATGAGCTGTCTTTTGA
ACAAAAAAAATCCATCGAACGAGCCGTAATTGCAACGGGTCTTGGTTCAAATAATAATATCGATATTCGAAAAAGTGTCT
CATTTTTTAATAAACGTTATTTTTTCGTTTTTTTACTCGGTAGAGATTATAGAAATAAGATGAGAAGCGAGTCACCACTT
GCATTATTCTTCATGACACTATTAACGTGCTTCGGTGTGGTTGCTCTTTTCGGACTCGCGGTGGTTATTCTTTATCTTAT
AAAATCAGCGCTCGGTATCGATATATTTCATAATTTTTCATTTGGGATTTGGGATTGGTTTAAAGAAGTCATGCATATTT
CATAA

Upstream 100 bases:

>100_bases
GTTAATTATAGTCAGTATTTAGCGCATTATGATTGGCATAAAATTGCAGGTAAAACGATGGCCATCTATGACACTATTGA
GAAAAAGAGAACTCAACATG

Downstream 100 bases:

>100_bases
TTAACAATGATACTCCACCATGTTTCAACTTAAAGCGCTTCATTTACCCGTTATTAGTCGTTAAACTGATCATATAACGA
TGATGCTCAATCAAGAGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MDKKQQRLIANFYSALDGNISNELSFEQKKSIERAVIATGLGSNNNIDIRKSVSFFNKRYFFVFLLGRDYRNKMRSESPL
ALFFMTLLTCFGVVALFGLAVVILYLIKSALGIDIFHNFSFGIWDWFKEVMHIS

Sequences:

>Translated_134_residues
MDKKQQRLIANFYSALDGNISNELSFEQKKSIERAVIATGLGSNNNIDIRKSVSFFNKRYFFVFLLGRDYRNKMRSESPL
ALFFMTLLTCFGVVALFGLAVVILYLIKSALGIDIFHNFSFGIWDWFKEVMHIS
>Mature_134_residues
MDKKQQRLIANFYSALDGNISNELSFEQKKSIERAVIATGLGSNNNIDIRKSVSFFNKRYFFVFLLGRDYRNKMRSESPL
ALFFMTLLTCFGVVALFGLAVVILYLIKSALGIDIFHNFSFGIWDWFKEVMHIS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15466; Mature: 15466

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKKQQRLIANFYSALDGNISNELSFEQKKSIERAVIATGLGSNNNIDIRKSVSFFNKRY
CCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
FFVFLLGRDYRNKMRSESPLALFFMTLLTCFGVVALFGLAVVILYLIKSALGIDIFHNFS
HEEEEECCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
FGIWDWFKEVMHIS
HHHHHHHHHHHCCC
>Mature Secondary Structure
MDKKQQRLIANFYSALDGNISNELSFEQKKSIERAVIATGLGSNNNIDIRKSVSFFNKRY
CCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
FFVFLLGRDYRNKMRSESPLALFFMTLLTCFGVVALFGLAVVILYLIKSALGIDIFHNFS
HEEEEECCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
FGIWDWFKEVMHIS
HHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA