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The map label for this gene is rfaB [C]

Identifier: 209694049

GI number: 209694049

Start: 505085

End: 506215

Strand: Reverse

Name: rfaB [C]

Synonym: VSAL_I0450

Alternate gene names: 209694049

Gene position: 506215-505085 (Counterclockwise)

Preceding gene: 209694050

Following gene: 209694048

Centisome position: 15.22

GC content: 39.17

Gene sequence:

>1131_bases
ATGACCACTAACATTACCGTCATCGGCACTCGTGGGATCCCTGATGTTTTAGGCGGAGTAGAAACTCACTGTCAGAATTT
ATACCCTGAAATTAAGACACAATTCGATACTGAGATTTGTGTCATTGCTCGTTCGCCTTATGTCGATTATAAAAAATCCA
CTTACCGAGGTGTCAATACAAAGGCTATTTGGGCACCAAAGAAGAAATCATTAGAAGCGATAGTTCACTCAACCTTATCT
TCGTTTTCAACGTTATTTGATCGTTCTAACATTGTCCATGTTCACGCGATTGGACCAGGGCTTGTTGTACCTCTATTACG
AGTTTTAGGTAAAAAAGTGGTTTTCACTCATCATGGTCCTGATTATGACCGTCAAAAATGGGGGGGATTTGCAAAACGAA
TGTTACAATTAGGTGAAAGGTTAGCAGTCACTTACGCAACGGAAGTCATTGTAATTTCAGACGTAATTAACGACATCATT
AAATCGAAATATAATCGCCACGATGCCCATTTAGTTTACAATGGGGTAAACCTACCCACTCCACTCCCTCAAGAAAAAAT
AGATGCTGTGTTAACTCAATTTACTCTTACTGAAAACAACTACTTGGTTGCGGTTGGGCGTTTAGTCGAAGAAAAAGGAT
TCCACGATCTTATCAGTGCTTATGAAAAAGCAAACATTGATATACCGCTGGTAATTATGGGAGACACCGATCATCCGACG
CCCTACAGTGAACAGCTAAAAGCACAAGCAAAACATGTCGATGGTGTAATAATGACGGGATTTTTAAAAGGTGAGCAATT
ACAATCTATTTTCTCAAAAGCGAAAGCCTTTGTGATGCCCTCTTACCATGAAGGTTTACCGATTGCTCTATTAGAAGCAA
TGTCTTATTCATTACCCGCCATTGTCAGTAATATTCCAGCAAATCTAGAAGTTAAACTAAGCCCTGAAAGTTATTTTCCC
GTTGGCGATATCGATAGCCTAACGACGGCATTGATTAACCATTCAATAGGCTCTGAGAGCAATGTTAATTATAGTCAGTA
TTTAGCGCATTATGATTGGCATAAAATTGCAGGTAAAACGATGGCCATCTATGACACTATTGAGAAAAAGAGAACTCAAC
ATGATGGATAA

Upstream 100 bases:

>100_bases
GGGGAAGAATGCAAGACAACGCTTTTTAAGTAAGTACACACTAACAAAACACAAAACAGATTTACTCAATCTTTATAATG
AATTACTAAAGGGATAATAC

Downstream 100 bases:

>100_bases
AAAACAACAGAGACTCATCGCTAATTTTTATTCAGCATTAGATGGAAATATTTCAAATGAGCTGTCTTTTGAACAAAAAA
AATCCATCGAACGAGCCGTA

Product: glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 376; Mature: 375

Protein sequence:

>376_residues
MTTNITVIGTRGIPDVLGGVETHCQNLYPEIKTQFDTEICVIARSPYVDYKKSTYRGVNTKAIWAPKKKSLEAIVHSTLS
SFSTLFDRSNIVHVHAIGPGLVVPLLRVLGKKVVFTHHGPDYDRQKWGGFAKRMLQLGERLAVTYATEVIVISDVINDII
KSKYNRHDAHLVYNGVNLPTPLPQEKIDAVLTQFTLTENNYLVAVGRLVEEKGFHDLISAYEKANIDIPLVIMGDTDHPT
PYSEQLKAQAKHVDGVIMTGFLKGEQLQSIFSKAKAFVMPSYHEGLPIALLEAMSYSLPAIVSNIPANLEVKLSPESYFP
VGDIDSLTTALINHSIGSESNVNYSQYLAHYDWHKIAGKTMAIYDTIEKKRTQHDG

Sequences:

>Translated_376_residues
MTTNITVIGTRGIPDVLGGVETHCQNLYPEIKTQFDTEICVIARSPYVDYKKSTYRGVNTKAIWAPKKKSLEAIVHSTLS
SFSTLFDRSNIVHVHAIGPGLVVPLLRVLGKKVVFTHHGPDYDRQKWGGFAKRMLQLGERLAVTYATEVIVISDVINDII
KSKYNRHDAHLVYNGVNLPTPLPQEKIDAVLTQFTLTENNYLVAVGRLVEEKGFHDLISAYEKANIDIPLVIMGDTDHPT
PYSEQLKAQAKHVDGVIMTGFLKGEQLQSIFSKAKAFVMPSYHEGLPIALLEAMSYSLPAIVSNIPANLEVKLSPESYFP
VGDIDSLTTALINHSIGSESNVNYSQYLAHYDWHKIAGKTMAIYDTIEKKRTQHDG
>Mature_375_residues
TTNITVIGTRGIPDVLGGVETHCQNLYPEIKTQFDTEICVIARSPYVDYKKSTYRGVNTKAIWAPKKKSLEAIVHSTLSS
FSTLFDRSNIVHVHAIGPGLVVPLLRVLGKKVVFTHHGPDYDRQKWGGFAKRMLQLGERLAVTYATEVIVISDVINDIIK
SKYNRHDAHLVYNGVNLPTPLPQEKIDAVLTQFTLTENNYLVAVGRLVEEKGFHDLISAYEKANIDIPLVIMGDTDHPTP
YSEQLKAQAKHVDGVIMTGFLKGEQLQSIFSKAKAFVMPSYHEGLPIALLEAMSYSLPAIVSNIPANLEVKLSPESYFPV
GDIDSLTTALINHSIGSESNVNYSQYLAHYDWHKIAGKTMAIYDTIEKKRTQHDG

Specific function: Adds A Galactose Goup To A Glucose Group Of Lps. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296
- InterPro:   IPR013534 [H]

Pfam domain/function: PF08323 Glyco_transf_5; PF00534 Glycos_transf_1 [H]

EC number: 2.4.1.- [C]

Molecular weight: Translated: 41832; Mature: 41701

Theoretical pI: Translated: 7.30; Mature: 7.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTNITVIGTRGIPDVLGGVETHCQNLYPEIKTQFDTEICVIARSPYVDYKKSTYRGVNT
CCCEEEEEECCCCHHHHHHHHHHHHHHCHHHHHCCCCEEEEEECCCCCCCCHHHCCCCCC
KAIWAPKKKSLEAIVHSTLSSFSTLFDRSNIVHVHAIGPGLVVPLLRVLGKKVVFTHHGP
EEEECCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHCCEEEEECCCC
DYDRQKWGGFAKRMLQLGERLAVTYATEVIVISDVINDIIKSKYNRHDAHLVYNGVNLPT
CCCHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCC
PLPQEKIDAVLTQFTLTENNYLVAVGRLVEEKGFHDLISAYEKANIDIPLVIMGDTDHPT
CCCHHHHHHHHHHEEEECCCEEEEEHHHHHHCCHHHHHHHHHHCCCCEEEEEECCCCCCC
PYSEQLKAQAKHVDGVIMTGFLKGEQLQSIFSKAKAFVMPSYHEGLPIALLEAMSYSLPA
CHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHCCHHH
IVSNIPANLEVKLSPESYFPVGDIDSLTTALINHSIGSESNVNYSQYLAHYDWHKIAGKT
HHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHCCHHHHCCCE
MAIYDTIEKKRTQHDG
EHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TTNITVIGTRGIPDVLGGVETHCQNLYPEIKTQFDTEICVIARSPYVDYKKSTYRGVNT
CCEEEEEECCCCHHHHHHHHHHHHHHCHHHHHCCCCEEEEEECCCCCCCCHHHCCCCCC
KAIWAPKKKSLEAIVHSTLSSFSTLFDRSNIVHVHAIGPGLVVPLLRVLGKKVVFTHHGP
EEEECCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHCCEEEEECCCC
DYDRQKWGGFAKRMLQLGERLAVTYATEVIVISDVINDIIKSKYNRHDAHLVYNGVNLPT
CCCHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCC
PLPQEKIDAVLTQFTLTENNYLVAVGRLVEEKGFHDLISAYEKANIDIPLVIMGDTDHPT
CCCHHHHHHHHHHEEEECCCEEEEEHHHHHHCCHHHHHHHHHHCCCCEEEEEECCCCCCC
PYSEQLKAQAKHVDGVIMTGFLKGEQLQSIFSKAKAFVMPSYHEGLPIALLEAMSYSLPA
CHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHCCHHH
IVSNIPANLEVKLSPESYFPVGDIDSLTTALINHSIGSESNVNYSQYLAHYDWHKIAGKT
HHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHCCHHHHCCCE
MAIYDTIEKKRTQHDG
EHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Glycosyltransferases; Hexosyltransferases [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]