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The map label for this gene is yfbS [C]

Identifier: 209694023

GI number: 209694023

Start: 458830

End: 460557

Strand: Direct

Name: yfbS [C]

Synonym: VSAL_I0422

Alternate gene names: 209694023

Gene position: 458830-460557 (Clockwise)

Preceding gene: 209694022

Following gene: 209694024

Centisome position: 13.8

GC content: 39.76

Gene sequence:

>1728_bases
ATGCCGTGGGAACAAGGATTCGTTCTAGCTTTATTAACTCTTATTATTGTGAGTTTATTGGCGAGTAAATTAAAACCAAG
TGTGATTTTTGCAGGGTCTGCATTTATTGCCTTTATGGTCGGAATGATTGATTTGCCAAGCTTGGCAAAAAACTTTACTA
ATTCGTCATTATTGACCTTGGTGTTATTGATCCTAAGTTCTTGTGCACTAGAAAAAACGCGCCTTATCAGTTGGGTAGGG
CGTTATATTTCAGAGGGAAGGTTAGGGAGTGTGGTAGGTAAATTAGGTCTGTCGACTGCCTTACTTTCTTCTTTTACCAA
TAACACGGCCGTTGTGGTGTCATTAATTGGTGCTATCAAGCGTAATCAACGTCACGCGCCTTCTCGCCTTTTAATTCCTC
TTTCTTATGCGGCTATTTTAGGCGGCACACTTACGCTTATTGGCACATCAACCAACCTAATTATTAATAGTTTTGTCGAA
GATGCTGGTTTACCGAGTTTAAGCTTTTTTGCACCGACTGCGATTGGTTTAGTTGTACTTGCTGGCGGGTTATTAATTTT
AATCCCATTAAGCTATTTATTGCCGCAATACGATGATGGTAGTCAAGATGAGTTACCTTACTTTTTAGAAGCTCGGGTTG
AAGGGGCTTCTCCTTTAGTGGGTAAATCGATCAGTGAGAATAATCTTAGAGCTTTACGTAAACTATTTTTAGCGGAAGTG
ATTCGAGAAGGAAGAACGATCACTTCTGTTGATCCTGACATGATATTACTTGCCGGTGACCGGTTATTGTTTTGTGGTGA
TATAGAAAGCGTGACCACGTTACAAGAAATTAATGGATTAACTTTATTTGGTCAGCATCATTTAAACGGTCAGAATTTAA
TTGAAGTGGTTGTCAGTCAGTCGGCTTCTATTCGTGGGAAAAGTATTAAATCGGCACATTTTAGAGAGCGTTTTGATGCC
GTTGTTGTTGCTATCCGTAGAGGGCATGAGCGCCTTGAAGGCGGGCTAGGGAAAATAGAATTACAAGCTGGGGATACGTT
AGTTCTTGTTCCTGGGAAAAACTTTGAACAAAGTAAACAACAGCTTAAAAGAGAATTTGTCATTATTAGTGATTTAGATT
CTGCCGCAAAGTTGGATGGTGATAAAAGCACCTTTGTTCTATTAGGATTCGCGAGTGTTATCGCTGCGGCCTTATTGGAT
GTATTTCCGATCATTAAAGGGTTGTCAGTTTATTTATTAGCGATGTTTGCGTTTGGTGTCGTGAGCTTAGGTGAATTACG
TCGTCGTTTTCCTATTGATATTGTTGTGATTGTTGGTGCGGCATTATCTATTGCTCAGTTAATGTTATCTTCCGGTTTGT
CGGTTCAATTAGGTGACATGTTTATTGAATTATTTAATGGCTGGGGGGTGATGGGGGCATTGATTGCGGTTTACCTTATT
ACCTTAGTATTGACTGAATTGATCACCAATAATGCAGCGGCTGCGCTGGCATTCCCCATTGGCTATAGCATGGCACTTGG
TTATGGTGTTGATCCTATGCCATTTATTATGGCGGTATTGTTTGGAGCGAGTGCTAGCTTCATTTCCCCTTATGGATATC
AAACCAATTTATTAGTTTTTAGTGTTGGTAATTACACTTTGCTCGATTACGTAAAAGTAGGGTTGCCAATGTCAATTATT
TATTCGGTGTTAGTGCTGTCTTTAATCCCTCACTTTTTCCCATTTTAA

Upstream 100 bases:

>100_bases
GAAGTGGAATTAAATGCGTTAGTTCGTAAGCATTTTCCACATTGGGGCGCGCAAGATATTTCGAAGCTCTTAAGTTAGAG
TTAAGAGTAAGGTAATTACT

Downstream 100 bases:

>100_bases
TTCAAGGATGATATATGACTACGGAACAAACGAAAGAGCGCCAAGTAGTGAACGATGAAAATGTGGTTTGGCATCAATAT
TCGGTGACAAAAGAAACTCG

Product: ion transporter superfamily protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 575; Mature: 574

Protein sequence:

>575_residues
MPWEQGFVLALLTLIIVSLLASKLKPSVIFAGSAFIAFMVGMIDLPSLAKNFTNSSLLTLVLLILSSCALEKTRLISWVG
RYISEGRLGSVVGKLGLSTALLSSFTNNTAVVVSLIGAIKRNQRHAPSRLLIPLSYAAILGGTLTLIGTSTNLIINSFVE
DAGLPSLSFFAPTAIGLVVLAGGLLILIPLSYLLPQYDDGSQDELPYFLEARVEGASPLVGKSISENNLRALRKLFLAEV
IREGRTITSVDPDMILLAGDRLLFCGDIESVTTLQEINGLTLFGQHHLNGQNLIEVVVSQSASIRGKSIKSAHFRERFDA
VVVAIRRGHERLEGGLGKIELQAGDTLVLVPGKNFEQSKQQLKREFVIISDLDSAAKLDGDKSTFVLLGFASVIAAALLD
VFPIIKGLSVYLLAMFAFGVVSLGELRRRFPIDIVVIVGAALSIAQLMLSSGLSVQLGDMFIELFNGWGVMGALIAVYLI
TLVLTELITNNAAAALAFPIGYSMALGYGVDPMPFIMAVLFGASASFISPYGYQTNLLVFSVGNYTLLDYVKVGLPMSII
YSVLVLSLIPHFFPF

Sequences:

>Translated_575_residues
MPWEQGFVLALLTLIIVSLLASKLKPSVIFAGSAFIAFMVGMIDLPSLAKNFTNSSLLTLVLLILSSCALEKTRLISWVG
RYISEGRLGSVVGKLGLSTALLSSFTNNTAVVVSLIGAIKRNQRHAPSRLLIPLSYAAILGGTLTLIGTSTNLIINSFVE
DAGLPSLSFFAPTAIGLVVLAGGLLILIPLSYLLPQYDDGSQDELPYFLEARVEGASPLVGKSISENNLRALRKLFLAEV
IREGRTITSVDPDMILLAGDRLLFCGDIESVTTLQEINGLTLFGQHHLNGQNLIEVVVSQSASIRGKSIKSAHFRERFDA
VVVAIRRGHERLEGGLGKIELQAGDTLVLVPGKNFEQSKQQLKREFVIISDLDSAAKLDGDKSTFVLLGFASVIAAALLD
VFPIIKGLSVYLLAMFAFGVVSLGELRRRFPIDIVVIVGAALSIAQLMLSSGLSVQLGDMFIELFNGWGVMGALIAVYLI
TLVLTELITNNAAAALAFPIGYSMALGYGVDPMPFIMAVLFGASASFISPYGYQTNLLVFSVGNYTLLDYVKVGLPMSII
YSVLVLSLIPHFFPF
>Mature_574_residues
PWEQGFVLALLTLIIVSLLASKLKPSVIFAGSAFIAFMVGMIDLPSLAKNFTNSSLLTLVLLILSSCALEKTRLISWVGR
YISEGRLGSVVGKLGLSTALLSSFTNNTAVVVSLIGAIKRNQRHAPSRLLIPLSYAAILGGTLTLIGTSTNLIINSFVED
AGLPSLSFFAPTAIGLVVLAGGLLILIPLSYLLPQYDDGSQDELPYFLEARVEGASPLVGKSISENNLRALRKLFLAEVI
REGRTITSVDPDMILLAGDRLLFCGDIESVTTLQEINGLTLFGQHHLNGQNLIEVVVSQSASIRGKSIKSAHFRERFDAV
VVAIRRGHERLEGGLGKIELQAGDTLVLVPGKNFEQSKQQLKREFVIISDLDSAAKLDGDKSTFVLLGFASVIAAALLDV
FPIIKGLSVYLLAMFAFGVVSLGELRRRFPIDIVVIVGAALSIAQLMLSSGLSVQLGDMFIELFNGWGVMGALIAVYLIT
LVLTELITNNAAAALAFPIGYSMALGYGVDPMPFIMAVLFGASASFISPYGYQTNLLVFSVGNYTLLDYVKVGLPMSIIY
SVLVLSLIPHFFPF

Specific function: Unknown

COG id: COG0471

COG function: function code P; Di- and tricarboxylate transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 RCK C-terminal domains [H]

Homologues:

Organism=Homo sapiens, GI31795546, Length=149, Percent_Identity=29.5302013422819, Blast_Score=66, Evalue=1e-10,
Organism=Escherichia coli, GI1788629, Length=610, Percent_Identity=26.0655737704918, Blast_Score=152, Evalue=6e-38,
Organism=Caenorhabditis elegans, GI17551790, Length=134, Percent_Identity=29.1044776119403, Blast_Score=65, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001898
- InterPro:   IPR006037 [H]

Pfam domain/function: PF00939 Na_sulph_symp; PF02080 TrkA_C [H]

EC number: NA

Molecular weight: Translated: 61737; Mature: 61605

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPWEQGFVLALLTLIIVSLLASKLKPSVIFAGSAFIAFMVGMIDLPSLAKNFTNSSLLTL
CCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHCCHHHHHHCCCHHHHHH
VLLILSSCALEKTRLISWVGRYISEGRLGSVVGKLGLSTALLSSFTNNTAVVVSLIGAIK
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
RNQRHAPSRLLIPLSYAAILGGTLTLIGTSTNLIINSFVEDAGLPSLSFFAPTAIGLVVL
HCCCCCCCEEEEHHHHHHHHCCCEEEEECCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
AGGLLILIPLSYLLPQYDDGSQDELPYFLEARVEGASPLVGKSISENNLRALRKLFLAEV
HHHHHHHHHHHHHCCCCCCCCCCCCCHHHHEECCCCCCCCCCCCCCHHHHHHHHHHHHHH
IREGRTITSVDPDMILLAGDRLLFCGDIESVTTLQEINGLTLFGQHHLNGQNLIEVVVSQ
HHCCCEEEECCCCEEEEECCCEEEECCCHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHC
SASIRGKSIKSAHFRERFDAVVVAIRRGHERLEGGLGKIELQAGDTLVLVPGKNFEQSKQ
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEECCCCHHHHHH
QLKREFVIISDLDSAAKLDGDKSTFVLLGFASVIAAALLDVFPIIKGLSVYLLAMFAFGV
HHHHHEEEEECCCHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VSLGELRRRFPIDIVVIVGAALSIAQLMLSSGLSVQLGDMFIELFNGWGVMGALIAVYLI
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHH
TLVLTELITNNAAAALAFPIGYSMALGYGVDPMPFIMAVLFGASASFISPYGYQTNLLVF
HHHHHHHHHCCCHHHHEEHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEE
SVGNYTLLDYVKVGLPMSIIYSVLVLSLIPHFFPF
ECCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PWEQGFVLALLTLIIVSLLASKLKPSVIFAGSAFIAFMVGMIDLPSLAKNFTNSSLLTL
CCCCHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHCCHHHHHHCCCHHHHHH
VLLILSSCALEKTRLISWVGRYISEGRLGSVVGKLGLSTALLSSFTNNTAVVVSLIGAIK
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
RNQRHAPSRLLIPLSYAAILGGTLTLIGTSTNLIINSFVEDAGLPSLSFFAPTAIGLVVL
HCCCCCCCEEEEHHHHHHHHCCCEEEEECCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
AGGLLILIPLSYLLPQYDDGSQDELPYFLEARVEGASPLVGKSISENNLRALRKLFLAEV
HHHHHHHHHHHHHCCCCCCCCCCCCCHHHHEECCCCCCCCCCCCCCHHHHHHHHHHHHHH
IREGRTITSVDPDMILLAGDRLLFCGDIESVTTLQEINGLTLFGQHHLNGQNLIEVVVSQ
HHCCCEEEECCCCEEEEECCCEEEECCCHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHC
SASIRGKSIKSAHFRERFDAVVVAIRRGHERLEGGLGKIELQAGDTLVLVPGKNFEQSKQ
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEECCCCHHHHHH
QLKREFVIISDLDSAAKLDGDKSTFVLLGFASVIAAALLDVFPIIKGLSVYLLAMFAFGV
HHHHHEEEEECCCHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VSLGELRRRFPIDIVVIVGAALSIAQLMLSSGLSVQLGDMFIELFNGWGVMGALIAVYLI
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHH
TLVLTELITNNAAAALAFPIGYSMALGYGVDPMPFIMAVLFGASASFISPYGYQTNLLVF
HHHHHHHHHCCCHHHHEEHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEE
SVGNYTLLDYVKVGLPMSIIYSVLVLSLIPHFFPF
ECCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]