Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is 209694016

Identifier: 209694016

GI number: 209694016

Start: 451224

End: 451832

Strand: Reverse

Name: 209694016

Synonym: VSAL_I0415

Alternate gene names: NA

Gene position: 451832-451224 (Counterclockwise)

Preceding gene: 209694017

Following gene: 209694015

Centisome position: 13.59

GC content: 39.08

Gene sequence:

>609_bases
ATGGAAAGAAGAGAAACAACTCACTCTTCAATATCCACCGACCGATTAAATAAAAAGGAGTTTTTAATGCCAACACTCGC
AACACAAGAGGTACATCAGTCACCCGTTATTAGTGGCTGTATTGATGAACTAACAAAAGGAGTAACACTATTAAATTTAA
TTAACGATAGTGATTACATCCACCTTGCATTGCCCTATGTAGAGAGTTCTATTGGCAAGCATTTCCGTCATATTTTGGAT
CTTTTTCAAGCATTAATAAAAAAAGAACCCACCGAGCCAATTAATTACAATGTTCGTCGTCGAGGCCATCCGATTGAAAA
AAATAAAGACATCGCCATTACTGAACTGAATGACACAATAGATTGGTTAACTCATTTCCCGATAGAGCAACTCACCTCTC
AAGTCTCTCTGATCACCGAGGTTTGTCCTTATAAAAAGCAAGACCACATAATGCTTTCAAGTATCGAGCGTGAAATAACC
TTTGCGTCACTTCATGCCTCTCATCATTACGCGTTAATAAAAGTCATCACCTTATCCATTGGCATAAACACGCAATCAAC
GTTTGGTTTCGCGCCGACAACAACGACCTATTTACGGGGAGAAGCCTAA

Upstream 100 bases:

>100_bases
TTTCCACGTTATTACTTCAATACAAAATATTATTTGAAATTGGCGCACTGCAAAAAAAACAAGGTCATCACTCCCCAAAA
ATAAAAGAACTATTGGCGGC

Downstream 100 bases:

>100_bases
TGTGCACAGTCTCTTGGTTCAACACGCCTACAGGATATGAATTATTTTTTAATCGTGACGAACAGCGGTCTCGCTCTGAT
GCATTAACACCTCAGGTGTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MERRETTHSSISTDRLNKKEFLMPTLATQEVHQSPVISGCIDELTKGVTLLNLINDSDYIHLALPYVESSIGKHFRHILD
LFQALIKKEPTEPINYNVRRRGHPIEKNKDIAITELNDTIDWLTHFPIEQLTSQVSLITEVCPYKKQDHIMLSSIEREIT
FASLHASHHYALIKVITLSIGINTQSTFGFAPTTTTYLRGEA

Sequences:

>Translated_202_residues
MERRETTHSSISTDRLNKKEFLMPTLATQEVHQSPVISGCIDELTKGVTLLNLINDSDYIHLALPYVESSIGKHFRHILD
LFQALIKKEPTEPINYNVRRRGHPIEKNKDIAITELNDTIDWLTHFPIEQLTSQVSLITEVCPYKKQDHIMLSSIEREIT
FASLHASHHYALIKVITLSIGINTQSTFGFAPTTTTYLRGEA
>Mature_202_residues
MERRETTHSSISTDRLNKKEFLMPTLATQEVHQSPVISGCIDELTKGVTLLNLINDSDYIHLALPYVESSIGKHFRHILD
LFQALIKKEPTEPINYNVRRRGHPIEKNKDIAITELNDTIDWLTHFPIEQLTSQVSLITEVCPYKKQDHIMLSSIEREIT
FASLHASHHYALIKVITLSIGINTQSTFGFAPTTTTYLRGEA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23009; Mature: 23009

Theoretical pI: Translated: 6.74; Mature: 6.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERRETTHSSISTDRLNKKEFLMPTLATQEVHQSPVISGCIDELTKGVTLLNLINDSDYI
CCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHEEEEEEECCCCEE
HLALPYVESSIGKHFRHILDLFQALIKKEPTEPINYNVRRRGHPIEKNKDIAITELNDTI
EEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCCCCEEEEECCHHH
DWLTHFPIEQLTSQVSLITEVCPYKKQDHIMLSSIEREITFASLHASHHYALIKVITLSI
HHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHEEEEEEHHC
GINTQSTFGFAPTTTTYLRGEA
CCCCCCCCCCCCCCEEEEECCC
>Mature Secondary Structure
MERRETTHSSISTDRLNKKEFLMPTLATQEVHQSPVISGCIDELTKGVTLLNLINDSDYI
CCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHEEEEEEECCCCEE
HLALPYVESSIGKHFRHILDLFQALIKKEPTEPINYNVRRRGHPIEKNKDIAITELNDTI
EEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCCCCEEEEECCHHH
DWLTHFPIEQLTSQVSLITEVCPYKKQDHIMLSSIEREITFASLHASHHYALIKVITLSI
HHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHEEEEEEHHC
GINTQSTFGFAPTTTTYLRGEA
CCCCCCCCCCCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA