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The map label for this gene is yjjB [C]

Identifier: 209693968

GI number: 209693968

Start: 399999

End: 400490

Strand: Direct

Name: yjjB [C]

Synonym: VSAL_I0365

Alternate gene names: 209693968

Gene position: 399999-400490 (Clockwise)

Preceding gene: 209693967

Following gene: 209693969

Centisome position: 12.03

GC content: 39.84

Gene sequence:

>492_bases
ATGGATAATGTAACTATGCAGTCTATTTTTGAATTATTCCTCGCCTTATTGAATGACATGTTTTTTGCAATGATCCCCGC
GATCGGTTTTGCTTTAGTTTTTAATGTGCCAGTGAAAGCATTAAAATATTGTGCGATTGGTGGTGCCATTGGGCATGGAA
CTCGATTTTTATTAATGCATTATGGCGCACCATTAGAGTGGGCTACATTATGTGCAGCAACAGTGGTGGGTATGATCGGT
GTTCATTGGTCACATCGTTTTTTAGCTCACCCTAAAGTTTTTACTGTCGCGGCATTAATTCCAATGATCCCGGGTGTTTT
TGCTTTTAAGGCGATGATTGCGGTTGTTGAGATAAATCACTTAGGATACTCTCCTGAATTGTGGGCTCTGATGATCGATA
ATTTAATTAAAACCTTATTTACGATTGCAGCACTCGCGATTGGGTTAGCGATGCCTGGTTTGCTGTTTTACCGTAGAAAA
TCTATAGTGTGA

Upstream 100 bases:

>100_bases
GTATTGCACGTTGGACATTTGCGACTTTACTTACTTTGGCTACCAGTATTGGTATTGTAGGTGCAATGAATTTAGTCGGC
GTGTGGGGGTGGATTAACTA

Downstream 100 bases:

>100_bases
TAAAGGTATTAATTTGTTATTCTACGGACCAGTTTTTTTGCTTAATAAAATGAGATTTAGAATAAATGAAGATTAGTATG
ATTGCTGCCATGGCAAATAA

Product: membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 163; Mature: 163

Protein sequence:

>163_residues
MDNVTMQSIFELFLALLNDMFFAMIPAIGFALVFNVPVKALKYCAIGGAIGHGTRFLLMHYGAPLEWATLCAATVVGMIG
VHWSHRFLAHPKVFTVAALIPMIPGVFAFKAMIAVVEINHLGYSPELWALMIDNLIKTLFTIAALAIGLAMPGLLFYRRK
SIV

Sequences:

>Translated_163_residues
MDNVTMQSIFELFLALLNDMFFAMIPAIGFALVFNVPVKALKYCAIGGAIGHGTRFLLMHYGAPLEWATLCAATVVGMIG
VHWSHRFLAHPKVFTVAALIPMIPGVFAFKAMIAVVEINHLGYSPELWALMIDNLIKTLFTIAALAIGLAMPGLLFYRRK
SIV
>Mature_163_residues
MDNVTMQSIFELFLALLNDMFFAMIPAIGFALVFNVPVKALKYCAIGGAIGHGTRFLLMHYGAPLEWATLCAATVVGMIG
VHWSHRFLAHPKVFTVAALIPMIPGVFAFKAMIAVVEINHLGYSPELWALMIDNLIKTLFTIAALAIGLAMPGLLFYRRK
SIV

Specific function: Unknown

COG id: COG3610

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yjjP [H]

Homologues:

Organism=Escherichia coli, GI145693219, Length=152, Percent_Identity=52.6315789473684, Blast_Score=173, Evalue=6e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010619 [H]

Pfam domain/function: PF06738 DUF1212 [H]

EC number: NA

Molecular weight: Translated: 17882; Mature: 17882

Theoretical pI: Translated: 9.18; Mature: 9.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
6.1 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
6.1 %Met     (Mature Protein)
7.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNVTMQSIFELFLALLNDMFFAMIPAIGFALVFNVPVKALKYCAIGGAIGHGTRFLLMH
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHH
YGAPLEWATLCAATVVGMIGVHWSHRFLAHPKVFTVAALIPMIPGVFAFKAMIAVVEINH
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGYSPELWALMIDNLIKTLFTIAALAIGLAMPGLLFYRRKSIV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDNVTMQSIFELFLALLNDMFFAMIPAIGFALVFNVPVKALKYCAIGGAIGHGTRFLLMH
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHH
YGAPLEWATLCAATVVGMIGVHWSHRFLAHPKVFTVAALIPMIPGVFAFKAMIAVVEINH
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGYSPELWALMIDNLIKTLFTIAALAIGLAMPGLLFYRRKSIV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]