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The map label for this gene is yjjP [H]

Identifier: 209693967

GI number: 209693967

Start: 399220

End: 399999

Strand: Direct

Name: yjjP [H]

Synonym: VSAL_I0364

Alternate gene names: 209693967

Gene position: 399220-399999 (Clockwise)

Preceding gene: 209693966

Following gene: 209693968

Centisome position: 12.01

GC content: 41.41

Gene sequence:

>780_bases
TTGCGAATTCAAATGGAAGAACAGCAAAGGGAAATATCACGTTTAGTGGCTAAGGCAGGACAAATGTTACTTCAGCATGG
TGCTGAAAGCAGCTTAGTTTCAGATGTGAGCCGACGGTTAGGGATTGCAGTTGGGGCTGATGAGGTTGAAATATCATTAT
CAGCCAGTTCGTTGGTAATAACGACAGTAATAAATGAACATTGCGTGACGACGGCGAGAAGAGCGCCTGATCGCGGTATT
AATATGAGAGCAATAACGGAAATACAACGGATATGCATTATGTCCGAAAAAGGGTTATTAGATCGTCATGAAGCGACTCA
TAAGTTAAATAATATTAGTCCTGAACGTTACAATCGTTGGTTAGTTGTCGTTATGATTGGATTGTCTTGCGCGAGCTTTA
GTCGCTTAGCTGGTGGAGATTGGCCTGTTTTTATGATGACATTTTTGGCCTCTTCTTTGGGCATGATTGTTCGTCAAGAA
ATCGGACACCGACATTTCAATCCTTTACTTAACTTTGGTATTACAGCCTTTGTTACTACGCTTATTTCTTCTCAAGCGGT
TATTTATCATATAGGTAATACGCCTTTTCTTGCCATGGCATCCTCTGTTTTGATGCTCGTTCCTGGTTTTCCATTGATCA
ACGCGGTTGCTGATATGGTGAAAGGTTACGTTAATATGGGTATTGCACGTTGGACATTTGCGACTTTACTTACTTTGGCT
ACCAGTATTGGTATTGTAGGTGCAATGAATTTAGTCGGCGTGTGGGGGTGGATTAACTAA

Upstream 100 bases:

>100_bases
ACAATTATTATAAAAAACCGCACTTGTTGCGGTTTTTTTTATTTAAGTCATTAAAAGTAAGAAGAGAAAAGATTAGAATC
ATTTTATATTAAGTTACTTA

Downstream 100 bases:

>100_bases
TGGATAATGTAACTATGCAGTCTATTTTTGAATTATTCCTCGCCTTATTGAATGACATGTTTTTTGCAATGATCCCCGCG
ATCGGTTTTGCTTTAGTTTT

Product: membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MRIQMEEQQREISRLVAKAGQMLLQHGAESSLVSDVSRRLGIAVGADEVEISLSASSLVITTVINEHCVTTARRAPDRGI
NMRAITEIQRICIMSEKGLLDRHEATHKLNNISPERYNRWLVVVMIGLSCASFSRLAGGDWPVFMMTFLASSLGMIVRQE
IGHRHFNPLLNFGITAFVTTLISSQAVIYHIGNTPFLAMASSVLMLVPGFPLINAVADMVKGYVNMGIARWTFATLLTLA
TSIGIVGAMNLVGVWGWIN

Sequences:

>Translated_259_residues
MRIQMEEQQREISRLVAKAGQMLLQHGAESSLVSDVSRRLGIAVGADEVEISLSASSLVITTVINEHCVTTARRAPDRGI
NMRAITEIQRICIMSEKGLLDRHEATHKLNNISPERYNRWLVVVMIGLSCASFSRLAGGDWPVFMMTFLASSLGMIVRQE
IGHRHFNPLLNFGITAFVTTLISSQAVIYHIGNTPFLAMASSVLMLVPGFPLINAVADMVKGYVNMGIARWTFATLLTLA
TSIGIVGAMNLVGVWGWIN
>Mature_259_residues
MRIQMEEQQREISRLVAKAGQMLLQHGAESSLVSDVSRRLGIAVGADEVEISLSASSLVITTVINEHCVTTARRAPDRGI
NMRAITEIQRICIMSEKGLLDRHEATHKLNNISPERYNRWLVVVMIGLSCASFSRLAGGDWPVFMMTFLASSLGMIVRQE
IGHRHFNPLLNFGITAFVTTLISSQAVIYHIGNTPFLAMASSVLMLVPGFPLINAVADMVKGYVNMGIARWTFATLLTLA
TSIGIVGAMNLVGVWGWIN

Specific function: Unknown

COG id: COG2966

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0108 [H]

Homologues:

Organism=Escherichia coli, GI87082435, Length=253, Percent_Identity=50.5928853754941, Blast_Score=266, Evalue=8e-73,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010619 [H]

Pfam domain/function: PF06738 DUF1212 [H]

EC number: NA

Molecular weight: Translated: 28411; Mature: 28411

Theoretical pI: Translated: 8.89; Mature: 8.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIQMEEQQREISRLVAKAGQMLLQHGAESSLVSDVSRRLGIAVGADEVEISLSASSLVI
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCEEECCCCEEEEECCCHHHH
TTVINEHCVTTARRAPDRGINMRAITEIQRICIMSEKGLLDRHEATHKLNNISPERYNRW
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHH
LVVVMIGLSCASFSRLAGGDWPVFMMTFLASSLGMIVRQEIGHRHFNPLLNFGITAFVTT
HEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
LISSQAVIYHIGNTPFLAMASSVLMLVPGFPLINAVADMVKGYVNMGIARWTFATLLTLA
HHCCCEEEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
TSIGIVGAMNLVGVWGWIN
HHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MRIQMEEQQREISRLVAKAGQMLLQHGAESSLVSDVSRRLGIAVGADEVEISLSASSLVI
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCEEECCCCEEEEECCCHHHH
TTVINEHCVTTARRAPDRGINMRAITEIQRICIMSEKGLLDRHEATHKLNNISPERYNRW
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHH
LVVVMIGLSCASFSRLAGGDWPVFMMTFLASSLGMIVRQEIGHRHFNPLLNFGITAFVTT
HEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
LISSQAVIYHIGNTPFLAMASSVLMLVPGFPLINAVADMVKGYVNMGIARWTFATLLTLA
HHCCCEEEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
TSIGIVGAMNLVGVWGWIN
HHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]