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The map label for this gene is 209693871

Identifier: 209693871

GI number: 209693871

Start: 309518

End: 310744

Strand: Reverse

Name: 209693871

Synonym: VSAL_I0263

Alternate gene names: NA

Gene position: 310744-309518 (Counterclockwise)

Preceding gene: 209693872

Following gene: 209693870

Centisome position: 9.35

GC content: 39.77

Gene sequence:

>1227_bases
ATGAAAAAAATAAGCTTACCTTTAATTGCTACAATACTTTGCTTTCTATTCTTCAGCACCCCTATTATTTATCCTGACTC
TTACGTGGTTGCTCCGCTTTTATTGGCACTATTTGGTTTGTTTTTACTGCCAAAAACCTATCACGCCTTTAAAAACAGAG
ACGTTAAATACATTAGCTTATCCATGGTTGGGTATTTTATTCTTACCATCATCTCTTTTCTGTATTCAGGAGGAGAAACC
AGCCAACTTGATATGCCAAGCCGAACGGTGTTGGCCTCTTTCATTTTATGTTTTTTAGTCACTTATAAACCCAATCCGGC
ACCACTATTTCTGGCTGCACCGATTGGAGCGGCGATTGCAGGCTTCATCAGTTTTTACCATAGCTTTTATATTGGCGGGT
GTGCTTTTGTCGGTACGTTTGGTTACATGCCAATTCAAATTGGAGGTATTATCGCCTCATTAGCCACATTCTCTGTTATC
TCGTTTTTTTATTACCGTAAAACAGAACAGAAGAACTTTGCTGTATTCAGCTTCGTTGCCGCTAATTTAGGCTACATCGC
CACGTTATTATCTGGTGCTCGCGGTGCTTGGCTATTAACTCCCTTTGTTTTACTTATTGTTCTGTATTTAAATAAAGAGT
TAATAAATAAAAAAATAGTCGGTTACGCTCTACTTGCTGCAATTATCGATTTATCTATTGCCTCAGCCCAAATCACTTCT
CGACTTGATGCAATACAGTCTGATTTAACTCAATACTCAGCTGAACAATCCGCTAGTTCTTCTGGTGCACGCTTAGAGAT
GTGGAAATCTGCATTATATAGCGCACAAGAATCCCCATTATTTGGTCAAGGATTTTCTGGTATTGAAGCAGCAAAACAGC
GCCAACTCGACGCTGGACTCATAGATCCAATTGCCTTGAAATACTCTCGAGCTCATAACCAATATTTAGAAGATTTACAA
ACCAAAGGGATTTTTGGTCTCTCTGTATTGCTGATCATGTTTGCGGTGCCTTTTGCTTTTTTCAAAAGAAACCTGAAACA
ATATATCAATGATTCAGACAAAGACACACACTACTTTTTGGCCCTAATGGGAGCCTCGCACGTCGCACTGGTTGCAGGCT
ATGCCCTTACCCAACATTACTTATCACATCACTCAGGCATTTTATTCTTTGCCGTTGGCATCGCCATACTGAGCGCCTTA
GTGATTAACCAAAGAAAACCATCATGA

Upstream 100 bases:

>100_bases
GTTTCAGGTTTCAGGTTTCAGAAAGAGCGTAAATCAAGCTCAAGAGCGCTACAACTGCTCTTGAACTTATAGTTTCTAGT
TATCAGGATAAATGAAAAAA

Downstream 100 bases:

>100_bases
AAATTTTGATCATTGGCCCATCTTGGGTGGGTGATATGGTGATGTCGCAATCACTGTATATCACACTAAAACAACAAAAC
CCTGACGCTGTTATTGATGT

Product: O-antigen ligase WaaL

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 408; Mature: 408

Protein sequence:

>408_residues
MKKISLPLIATILCFLFFSTPIIYPDSYVVAPLLLALFGLFLLPKTYHAFKNRDVKYISLSMVGYFILTIISFLYSGGET
SQLDMPSRTVLASFILCFLVTYKPNPAPLFLAAPIGAAIAGFISFYHSFYIGGCAFVGTFGYMPIQIGGIIASLATFSVI
SFFYYRKTEQKNFAVFSFVAANLGYIATLLSGARGAWLLTPFVLLIVLYLNKELINKKIVGYALLAAIIDLSIASAQITS
RLDAIQSDLTQYSAEQSASSSGARLEMWKSALYSAQESPLFGQGFSGIEAAKQRQLDAGLIDPIALKYSRAHNQYLEDLQ
TKGIFGLSVLLIMFAVPFAFFKRNLKQYINDSDKDTHYFLALMGASHVALVAGYALTQHYLSHHSGILFFAVGIAILSAL
VINQRKPS

Sequences:

>Translated_408_residues
MKKISLPLIATILCFLFFSTPIIYPDSYVVAPLLLALFGLFLLPKTYHAFKNRDVKYISLSMVGYFILTIISFLYSGGET
SQLDMPSRTVLASFILCFLVTYKPNPAPLFLAAPIGAAIAGFISFYHSFYIGGCAFVGTFGYMPIQIGGIIASLATFSVI
SFFYYRKTEQKNFAVFSFVAANLGYIATLLSGARGAWLLTPFVLLIVLYLNKELINKKIVGYALLAAIIDLSIASAQITS
RLDAIQSDLTQYSAEQSASSSGARLEMWKSALYSAQESPLFGQGFSGIEAAKQRQLDAGLIDPIALKYSRAHNQYLEDLQ
TKGIFGLSVLLIMFAVPFAFFKRNLKQYINDSDKDTHYFLALMGASHVALVAGYALTQHYLSHHSGILFFAVGIAILSAL
VINQRKPS
>Mature_408_residues
MKKISLPLIATILCFLFFSTPIIYPDSYVVAPLLLALFGLFLLPKTYHAFKNRDVKYISLSMVGYFILTIISFLYSGGET
SQLDMPSRTVLASFILCFLVTYKPNPAPLFLAAPIGAAIAGFISFYHSFYIGGCAFVGTFGYMPIQIGGIIASLATFSVI
SFFYYRKTEQKNFAVFSFVAANLGYIATLLSGARGAWLLTPFVLLIVLYLNKELINKKIVGYALLAAIIDLSIASAQITS
RLDAIQSDLTQYSAEQSASSSGARLEMWKSALYSAQESPLFGQGFSGIEAAKQRQLDAGLIDPIALKYSRAHNQYLEDLQ
TKGIFGLSVLLIMFAVPFAFFKRNLKQYINDSDKDTHYFLALMGASHVALVAGYALTQHYLSHHSGILFFAVGIAILSAL
VINQRKPS

Specific function: Unknown

COG id: COG3307

COG function: function code M; Lipid A core - O-antigen ligase and related enzymes

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007016 [H]

Pfam domain/function: PF04932 Wzy_C [H]

EC number: NA

Molecular weight: Translated: 44840; Mature: 44840

Theoretical pI: Translated: 9.49; Mature: 9.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKKISLPLIATILCFLFFSTPIIYPDSYVVAPLLLALFGLFLLPKTYHAFKNRDVKYISL
CCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHH
SMVGYFILTIISFLYSGGETSQLDMPSRTVLASFILCFLVTYKPNPAPLFLAAPIGAAIA
HHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECHHHHHHH
GFISFYHSFYIGGCAFVGTFGYMPIQIGGIIASLATFSVISFFYYRKTEQKNFAVFSFVA
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
ANLGYIATLLSGARGAWLLTPFVLLIVLYLNKELINKKIVGYALLAAIIDLSIASAQITS
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLDAIQSDLTQYSAEQSASSSGARLEMWKSALYSAQESPLFGQGFSGIEAAKQRQLDAGL
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCC
IDPIALKYSRAHNQYLEDLQTKGIFGLSVLLIMFAVPFAFFKRNLKQYINDSDKDTHYFL
CCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
ALMGASHVALVAGYALTQHYLSHHSGILFFAVGIAILSALVINQRKPS
HHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]