Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
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Accession | NC_011369 |
Length | 4,537,948 |
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The map label for this gene is yeiT [H]
Identifier: 209550604
GI number: 209550604
Start: 3086637
End: 3087998
Strand: Direct
Name: yeiT [H]
Synonym: Rleg2_3028
Alternate gene names: 209550604
Gene position: 3086637-3087998 (Clockwise)
Preceding gene: 209550603
Following gene: 209550605
Centisome position: 68.02
GC content: 64.39
Gene sequence:
>1362_bases ATGGAACGACTGGAAACTGGGATTCATGCCGGCCGGCTTTCGCCCGCCGAGTATGAGGCTAATTTTTCCGATCTTCATCC GCGCCTCGACAATCACGAGGCGCTGGTCGCCGCCGACCGCTGTTATTTCTGTTATGACGCGCCGTGCATGACGGCCTGTC CCACCTCGATCGACATTCCGCTGTTCATCCGCCAGATTTCGACCGGCAATCCGATCGGCTCGGCCAAGACCATCTTCGAC CAGAACATCCTCGGCGGCATGTGCGCCCGCGTCTGTCCCACCGAAGAGCTCTGCGAACAGGCCTGTGTGCGCAACACGGC CGAAGAACGCCCTGTCGAGATCGGCCGCCTGCAGCGTTATGCGACCGATACCGCCATGCAGGCCGGCAGGCAGTTCTACG CCAGGGCCGAAGCATCAGGCAAGACGATCGCCGTCGTCGGCGCAGGCCCGGCCGGCCTTGCCGCCGCCCATCGTCTGGCC GTGAAGGGCCATTCCGTCGTCATCTATGATGCCAGGGAAAAATCCGGCGGCCTCAACGAATACGGCATCGCCACCTACAA GACGGTCGACGATTTCGCCCAGGCGGAAGTCGACTATGTGCTTTCGATCGGCGGCATCGAGGTTCGCCACGGCGCTCTTC TCGGCCGCGATTTCTCGCTTGCCGATCTGCAGGCGCAATATGACGCCGTCTTCATCGGCATCGGCCTTGCCGGCGTCAAT GCGCTACGCATCGACGGCGAGAATCTCGCCGGCGTCGACGACGCCGTCGATTTCATCGCGGCACTGCGCCAGGCCGAAGA CAAGAGCCAGATCGCCATCGGCCGCCGTGTCGTCGTCCTCGGCGGCGGCATGACGGCGATCGACGCTGCCGTCCAGGCAA AGCTGCTCGGCGCCGAGGAGGTGACGATCTGTTACCGCCGCGGCAAGGAGCACATGAACGCCTCGGAATATGAGCAGGAT CTGGCAAGCTCCAAGGGTGTTATCATCCGCCACTGGCTGGCGCCGAAATCGATCCTGTCGCAGGACGGCAAGGTCGCCGC CATCGAGGTGGAATACACGCGGATCCTCGAAGGCCGCCTGATCGGCACCGGCGAAACCGGCGTAATCGCCGCCGACCAGA TCTTCAAGGCGATCGGCCAGAGCTTTGACGCCTCGGGCCTCGGTTCGTTGCGCATGGAATCCGGCCGCATTGCTGTCGAT GCCGACGGCCACACCTCGCTCGACGGCGTCTGGGCCGGCGGCGACTGCGTCTTCGGCGGCGACGATCTCACGGTTTCCGC CGTCGCTCACGGCCGCGACGCGGCTGAATCCATCCATCGCACCCTCACCGCAGCCGCCGCTCCGGCTGTCGCGGTTGCTT GA
Upstream 100 bases:
>100_bases TTCCCAAGGCAGGTTCGTCAAAATTTTACCGTTTGATAAATTTTTAAACCTGAGTTACGCTTTCCCTTACAGGCCGTTTA CCAATAATGAGGGAACTTCA
Downstream 100 bases:
>100_bases AGGGGAGAATGAATCATGGCTGATCTCCGCAATAATTTCGTCGGCATCAAGTCCCCGAACCCGTTCTGGCTGGCCTCTGC GCCGCCGACCGACAAGGCCT
Product: oxidoreductase
Products: L-glutamine; 2-oxoglutarate; NADPH; H+
Alternate protein names: NA
Number of amino acids: Translated: 453; Mature: 453
Protein sequence:
>453_residues MERLETGIHAGRLSPAEYEANFSDLHPRLDNHEALVAADRCYFCYDAPCMTACPTSIDIPLFIRQISTGNPIGSAKTIFD QNILGGMCARVCPTEELCEQACVRNTAEERPVEIGRLQRYATDTAMQAGRQFYARAEASGKTIAVVGAGPAGLAAAHRLA VKGHSVVIYDAREKSGGLNEYGIATYKTVDDFAQAEVDYVLSIGGIEVRHGALLGRDFSLADLQAQYDAVFIGIGLAGVN ALRIDGENLAGVDDAVDFIAALRQAEDKSQIAIGRRVVVLGGGMTAIDAAVQAKLLGAEEVTICYRRGKEHMNASEYEQD LASSKGVIIRHWLAPKSILSQDGKVAAIEVEYTRILEGRLIGTGETGVIAADQIFKAIGQSFDASGLGSLRMESGRIAVD ADGHTSLDGVWAGGDCVFGGDDLTVSAVAHGRDAAESIHRTLTAAAAPAVAVA
Sequences:
>Translated_453_residues MERLETGIHAGRLSPAEYEANFSDLHPRLDNHEALVAADRCYFCYDAPCMTACPTSIDIPLFIRQISTGNPIGSAKTIFD QNILGGMCARVCPTEELCEQACVRNTAEERPVEIGRLQRYATDTAMQAGRQFYARAEASGKTIAVVGAGPAGLAAAHRLA VKGHSVVIYDAREKSGGLNEYGIATYKTVDDFAQAEVDYVLSIGGIEVRHGALLGRDFSLADLQAQYDAVFIGIGLAGVN ALRIDGENLAGVDDAVDFIAALRQAEDKSQIAIGRRVVVLGGGMTAIDAAVQAKLLGAEEVTICYRRGKEHMNASEYEQD LASSKGVIIRHWLAPKSILSQDGKVAAIEVEYTRILEGRLIGTGETGVIAADQIFKAIGQSFDASGLGSLRMESGRIAVD ADGHTSLDGVWAGGDCVFGGDDLTVSAVAHGRDAAESIHRTLTAAAAPAVAVA >Mature_453_residues MERLETGIHAGRLSPAEYEANFSDLHPRLDNHEALVAADRCYFCYDAPCMTACPTSIDIPLFIRQISTGNPIGSAKTIFD QNILGGMCARVCPTEELCEQACVRNTAEERPVEIGRLQRYATDTAMQAGRQFYARAEASGKTIAVVGAGPAGLAAAHRLA VKGHSVVIYDAREKSGGLNEYGIATYKTVDDFAQAEVDYVLSIGGIEVRHGALLGRDFSLADLQAQYDAVFIGIGLAGVN ALRIDGENLAGVDDAVDFIAALRQAEDKSQIAIGRRVVVLGGGMTAIDAAVQAKLLGAEEVTICYRRGKEHMNASEYEQD LASSKGVIIRHWLAPKSILSQDGKVAAIEVEYTRILEGRLIGTGETGVIAADQIFKAIGQSFDASGLGSLRMESGRIAVD ADGHTSLDGVWAGGDCVFGGDDLTVSAVAHGRDAAESIHRTLTAAAAPAVAVA
Specific function: Unknown
COG id: COG0493
COG function: function code ER; NADPH-dependent glutamate synthase beta chain and related oxidoreductases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli glutamate synthase [NADPH] small chain (GltD) and to E.coli AegA [H]
Homologues:
Organism=Homo sapiens, GI119943098, Length=453, Percent_Identity=31.7880794701987, Blast_Score=176, Evalue=3e-44, Organism=Homo sapiens, GI237757300, Length=113, Percent_Identity=46.0176991150442, Blast_Score=96, Evalue=5e-20, Organism=Escherichia coli, GI1788468, Length=431, Percent_Identity=34.5707656612529, Blast_Score=212, Evalue=3e-56, Organism=Escherichia coli, GI87082180, Length=459, Percent_Identity=32.8976034858388, Blast_Score=193, Evalue=2e-50, Organism=Escherichia coli, GI1789606, Length=446, Percent_Identity=32.9596412556054, Blast_Score=193, Evalue=2e-50, Organism=Escherichia coli, GI1788811, Length=446, Percent_Identity=33.4080717488789, Blast_Score=178, Evalue=7e-46, Organism=Escherichia coli, GI1789243, Length=432, Percent_Identity=28.7037037037037, Blast_Score=124, Evalue=9e-30, Organism=Caenorhabditis elegans, GI71984108, Length=461, Percent_Identity=33.1887201735358, Blast_Score=174, Evalue=9e-44, Organism=Caenorhabditis elegans, GI17570289, Length=455, Percent_Identity=25.9340659340659, Blast_Score=96, Evalue=3e-20, Organism=Saccharomyces cerevisiae, GI6320030, Length=477, Percent_Identity=26.4150943396226, Blast_Score=115, Evalue=2e-26, Organism=Drosophila melanogaster, GI24640763, Length=460, Percent_Identity=32.6086956521739, Blast_Score=184, Evalue=9e-47, Organism=Drosophila melanogaster, GI18858217, Length=460, Percent_Identity=32.6086956521739, Blast_Score=184, Evalue=9e-47, Organism=Drosophila melanogaster, GI28574881, Length=446, Percent_Identity=28.0269058295964, Blast_Score=125, Evalue=6e-29, Organism=Drosophila melanogaster, GI24665539, Length=446, Percent_Identity=28.0269058295964, Blast_Score=125, Evalue=6e-29, Organism=Drosophila melanogaster, GI24665547, Length=461, Percent_Identity=27.765726681128, Blast_Score=125, Evalue=6e-29, Organism=Drosophila melanogaster, GI24665543, Length=461, Percent_Identity=27.765726681128, Blast_Score=125, Evalue=6e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013027 - InterPro: IPR012285 - InterPro: IPR009051 - InterPro: IPR016040 - InterPro: IPR001327 [H]
Pfam domain/function: PF00070 Pyr_redox; PF07992 Pyr_redox_2 [H]
EC number: 1.4.1.13
Molecular weight: Translated: 47884; Mature: 47884
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERLETGIHAGRLSPAEYEANFSDLHPRLDNHEALVAADRCYFCYDAPCMTACPTSIDIP CCHHHHCCCCCCCCCHHHCCCHHHCCCCCCCCCEEEEECCEEEEECCCCHHCCCCCCCCC LFIRQISTGNPIGSAKTIFDQNILGGMCARVCPTEELCEQACVRNTAEERPVEIGRLQRY EEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHCCHHHHHHHHH ATDTAMQAGRQFYARAEASGKTIAVVGAGPAGLAAAHRLAVKGHSVVIYDAREKSGGLNE HHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHEEECCCEEEEEECCCCCCCCCC YGIATYKTVDDFAQAEVDYVLSIGGIEVRHGALLGRDFSLADLQAQYDAVFIGIGLAGVN CCCEEEEHHHHHHHHCEEEEEEECCEEEECCEEECCCCCHHHHHHCCCEEEEEEEECCCE ALRIDGENLAGVDDAVDFIAALRQAEDKSQIAIGRRVVVLGGGMTAIDAAVQAKLLGAEE EEEECCCCCCCHHHHHHHHHHHHHCCCCCCEEECCEEEEEECCHHHHHHHHHHHHCCCCH VTICYRRGKEHMNASEYEQDLASSKGVIIRHWLAPKSILSQDGKVAAIEVEYTRILEGRL HHHHHHCCHHHCCHHHHHHHHHCCCCEEEEEECCCHHHHCCCCCEEEEEEEEEEEECCEE IGTGETGVIAADQIFKAIGQSFDASGLGSLRMESGRIAVDADGHTSLDGVWAGGDCVFGG EECCCCCEEEHHHHHHHHCCCCCCCCCCCEEEECCCEEEECCCCCCCCEEEECCEEEECC DDLTVSAVAHGRDAAESIHRTLTAAAAPAVAVA CCEEEEEECCCCHHHHHHHHHHHHHHCCCEECC >Mature Secondary Structure MERLETGIHAGRLSPAEYEANFSDLHPRLDNHEALVAADRCYFCYDAPCMTACPTSIDIP CCHHHHCCCCCCCCCHHHCCCHHHCCCCCCCCCEEEEECCEEEEECCCCHHCCCCCCCCC LFIRQISTGNPIGSAKTIFDQNILGGMCARVCPTEELCEQACVRNTAEERPVEIGRLQRY EEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHCCHHHHHHHHH ATDTAMQAGRQFYARAEASGKTIAVVGAGPAGLAAAHRLAVKGHSVVIYDAREKSGGLNE HHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHEEECCCEEEEEECCCCCCCCCC YGIATYKTVDDFAQAEVDYVLSIGGIEVRHGALLGRDFSLADLQAQYDAVFIGIGLAGVN CCCEEEEHHHHHHHHCEEEEEEECCEEEECCEEECCCCCHHHHHHCCCEEEEEEEECCCE ALRIDGENLAGVDDAVDFIAALRQAEDKSQIAIGRRVVVLGGGMTAIDAAVQAKLLGAEE EEEECCCCCCCHHHHHHHHHHHHHCCCCCCEEECCEEEEEECCHHHHHHHHHHHHCCCCH VTICYRRGKEHMNASEYEQDLASSKGVIIRHWLAPKSILSQDGKVAAIEVEYTRILEGRL HHHHHHCCHHHCCHHHHHHHHHCCCCEEEEEECCCHHHHCCCCCEEEEEEEEEEEECCEE IGTGETGVIAADQIFKAIGQSFDASGLGSLRMESGRIAVDADGHTSLDGVWAGGDCVFGG EECCCCCEEEHHHHHHHHCCCCCCCCCCCEEEECCCEEEECCCCCCCCEEEECCEEEECC DDLTVSAVAHGRDAAESIHRTLTAAAAPAVAVA CCEEEEEECCCCHHHHHHHHHHHHHHCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: L-glutamate; NADP+
Specific reaction: 2 L-glutamate + NADP+ = L-glutamine + 2-oxoglutarate + NADPH + H+
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]