Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
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Accession | NC_011369 |
Length | 4,537,948 |
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The map label for this gene is 209550603
Identifier: 209550603
GI number: 209550603
Start: 3085154
End: 3086218
Strand: Direct
Name: 209550603
Synonym: Rleg2_3027
Alternate gene names: NA
Gene position: 3085154-3086218 (Clockwise)
Preceding gene: 209550602
Following gene: 209550604
Centisome position: 67.99
GC content: 59.91
Gene sequence:
>1065_bases ATGGGCGCTTCCTTCAGCGACGTTCAAGTTGTCACAAGGAAAGGCGGCCGAGTGAATACCACTGAACCATTGTCCGGCAT GCCTTTTACCTTCGAGGGCAAAGCCGCAATGATGGAACGCGCGCTCGGCAGCGCTGGGATTTCAATCCTCTGCCAGGATG CCCGGCTGGCAATCTTCTATGCCGAAAATCTGCCGCCGCATTTCGCAGCACTCTTCACGCCGGGCGATGGCGATGCCGGC CTGTTCGGCGACACGCACGGCCGGTATCTGACGGCGCTGAAACACAAGGTGCTGGAAACCGGAATTCCCAACAATGCCGA GGTCGAGATCGACGTCGACGGCGAAATGCGCACCTATGAACTAAAGATCCAGCGCACCGGCAAACGCGGCACCCATGGAC TTCTCTCGGTCATGGCCGAAGTCACCGAAAGCCGGCACCGTGAAAAAGTGCTGAAATCGCTGCTGCGCGAACTCTCGCAC CGCTCCAAGAACCTTCTCGCCATCATCCAGGGCATCGCCACGCAGACGGCGCGCAACACGCTCTCGCTCGACAGTTTCCT GCTCAAATTCCGCGGACGGCTGCAATCGCTGTCCAACTCGCAGGATCTGATCACCGATTCGAGCTGGCGTGGCGCCTATC TCTTCGAACTGGCCGAAAAACAATTCGCGCCCTACTGGCCGGAAACGGCCGGCTCCATGCCGATCTACGGCATCAACGCC CATCTGACGCCGAATGCCGCCGTGCATCTCGGGCTCGCCCTGCACGAACTCATCGTCAACTCCGCCTCCTATGGCGCGAT ATCCGGTGGCGCCGCCTCGATCACCTTGAATTGCCGCGACGCCATGATCGGCGAGAAGAAGGCGATCGAAGTCACCTGGG CCGAGGTGCTGCAGAACCAGACGGAAGTCCACGAATTCAGCGACAACAGCTTCGGCCGCACCGTGCTCGAGCGTGTCGTG CCCTCGTCGGTCAACGGCAAGGCGGACCTCAACCTCGTTCCTGGCCGCATCGAATATCGGCTGACCATTCCGGAAACCGA ATTCGAAATCTTCAAGCGCGTATGA
Upstream 100 bases:
>100_bases AACCAAATCGCCAAAGCAGACGTTCCGGTGCTACCGGGACGCTCCGCTGCTTTAACGGTTTCTGCAGCGCTTTGTTCTAA AGTTGACGGGCGGCGTCCCT
Downstream 100 bases:
>100_bases AAGCCTGACACCTGGAAAACGGGACGGCCAGACGGAAAAACAGCCGGTGCGAGGGCGGCGCACCGGCTGTCTTCACTCAC CGGGAGGGGACCGTGAGTAC
Product: signal transduction histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 354; Mature: 353
Protein sequence:
>354_residues MGASFSDVQVVTRKGGRVNTTEPLSGMPFTFEGKAAMMERALGSAGISILCQDARLAIFYAENLPPHFAALFTPGDGDAG LFGDTHGRYLTALKHKVLETGIPNNAEVEIDVDGEMRTYELKIQRTGKRGTHGLLSVMAEVTESRHREKVLKSLLRELSH RSKNLLAIIQGIATQTARNTLSLDSFLLKFRGRLQSLSNSQDLITDSSWRGAYLFELAEKQFAPYWPETAGSMPIYGINA HLTPNAAVHLGLALHELIVNSASYGAISGGAASITLNCRDAMIGEKKAIEVTWAEVLQNQTEVHEFSDNSFGRTVLERVV PSSVNGKADLNLVPGRIEYRLTIPETEFEIFKRV
Sequences:
>Translated_354_residues MGASFSDVQVVTRKGGRVNTTEPLSGMPFTFEGKAAMMERALGSAGISILCQDARLAIFYAENLPPHFAALFTPGDGDAG LFGDTHGRYLTALKHKVLETGIPNNAEVEIDVDGEMRTYELKIQRTGKRGTHGLLSVMAEVTESRHREKVLKSLLRELSH RSKNLLAIIQGIATQTARNTLSLDSFLLKFRGRLQSLSNSQDLITDSSWRGAYLFELAEKQFAPYWPETAGSMPIYGINA HLTPNAAVHLGLALHELIVNSASYGAISGGAASITLNCRDAMIGEKKAIEVTWAEVLQNQTEVHEFSDNSFGRTVLERVV PSSVNGKADLNLVPGRIEYRLTIPETEFEIFKRV >Mature_353_residues GASFSDVQVVTRKGGRVNTTEPLSGMPFTFEGKAAMMERALGSAGISILCQDARLAIFYAENLPPHFAALFTPGDGDAGL FGDTHGRYLTALKHKVLETGIPNNAEVEIDVDGEMRTYELKIQRTGKRGTHGLLSVMAEVTESRHREKVLKSLLRELSHR SKNLLAIIQGIATQTARNTLSLDSFLLKFRGRLQSLSNSQDLITDSSWRGAYLFELAEKQFAPYWPETAGSMPIYGINAH LTPNAAVHLGLALHELIVNSASYGAISGGAASITLNCRDAMIGEKKAIEVTWAEVLQNQTEVHEFSDNSFGRTVLERVVP SSVNGKADLNLVPGRIEYRLTIPETEFEIFKRV
Specific function: Photosensitive kinase that is involved in increased bacterial virulence upon exposure to light. Once ejected from an infected animal host, sunlight acts as an environmental signal that increases the virulence of the bacterium, preparing it for infection o
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001610 - InterPro: IPR000014 - InterPro: IPR000700 - InterPro: IPR013767 - InterPro: IPR013655 - InterPro: IPR011102 [H]
Pfam domain/function: PF07536 HWE_HK; PF00989 PAS; PF08447 PAS_3 [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 38820; Mature: 38689
Theoretical pI: Translated: 6.87; Mature: 6.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGASFSDVQVVTRKGGRVNTTEPLSGMPFTFEGKAAMMERALGSAGISILCQDARLAIFY CCCCCCHHHHEECCCCCCCCCCCCCCCCEEECCHHHHHHHHHCCCCEEEEEECCEEEEEE AENLPPHFAALFTPGDGDAGLFGDTHGRYLTALKHKVLETGIPNNAEVEIDVDGEMRTYE ECCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCEEEEE LKIQRTGKRGTHGLLSVMAEVTESRHREKVLKSLLRELSHRSKNLLAIIQGIATQTARNT EEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH LSLDSFLLKFRGRLQSLSNSQDLITDSSWRGAYLFELAEKQFAPYWPETAGSMPIYGINA HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEECE HLTPNAAVHLGLALHELIVNSASYGAISGGAASITLNCRDAMIGEKKAIEVTWAEVLQNQ EECCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHHHCCCCCEEEEEHHHHHCCH TEVHEFSDNSFGRTVLERVVPSSVNGKADLNLVPGRIEYRLTIPETEFEIFKRV HHHHHCCCCCHHHHHHHHHCCCCCCCCCCEEEECCEEEEEEECCCHHHHHHHCC >Mature Secondary Structure GASFSDVQVVTRKGGRVNTTEPLSGMPFTFEGKAAMMERALGSAGISILCQDARLAIFY CCCCCHHHHEECCCCCCCCCCCCCCCCEEECCHHHHHHHHHCCCCEEEEEECCEEEEEE AENLPPHFAALFTPGDGDAGLFGDTHGRYLTALKHKVLETGIPNNAEVEIDVDGEMRTYE ECCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCEEEEE LKIQRTGKRGTHGLLSVMAEVTESRHREKVLKSLLRELSHRSKNLLAIIQGIATQTARNT EEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH LSLDSFLLKFRGRLQSLSNSQDLITDSSWRGAYLFELAEKQFAPYWPETAGSMPIYGINA HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEECE HLTPNAAVHLGLALHELIVNSASYGAISGGAASITLNCRDAMIGEKKAIEVTWAEVLQNQ EECCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHHHCCCCCEEEEEHHHHHCCH TEVHEFSDNSFGRTVLERVVPSSVNGKADLNLVPGRIEYRLTIPETEFEIFKRV HHHHHCCCCCHHHHHHHHHCCCCCCCCCCEEEECCEEEEEEECCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA