Definition Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome.
Accession NC_011369
Length 4,537,948

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The map label for this gene is ycdQ [C]

Identifier: 209550547

GI number: 209550547

Start: 3031597

End: 3032571

Strand: Direct

Name: ycdQ [C]

Synonym: Rleg2_2971

Alternate gene names: 209550547

Gene position: 3031597-3032571 (Clockwise)

Preceding gene: 209550546

Following gene: 209550548

Centisome position: 66.81

GC content: 54.87

Gene sequence:

>975_bases
ATGACGGGTCCAAGGATTAGTGTGATCTTTTCGTCCTTTAACGGTGCCAGTAGACGGCTTCAACAGATGCTGGACTCCAT
GCTCGCGCAAAACCTCTCAAGCGAGCAGTGGGAACTGATAGCCGTCAACAACAACAGCAATGATGAGACACAGCAGCTTC
TCGATCGATATACGAAGAAGCTCTCAATGGTCGTTGTCAATCATGCCCGTCCAGGAAAATCAGGAGCTATGAATGCAGCT
CTGGCGGTAGCTCGAGGCGCACTGATCGTTTTTACGGACGATGACATCGAGGCAGACGTGAATTGGTTGAGTGCGATCGT
CGCATGCGCAGCGGCCAATCCGGATTTCGGAGTCATCGGCGGCCGCATTTTGCCGAACTGGGAGCATTATCCTCAGGGGG
ATCCGCTGTTGGACTGGATTCCCATGGGATCGACCTTCGCCATAGCTGACGACGAATCCAGCGGCCTTTGCGACCCGACA
AAAATTTGGGGCCCAAACACGACGGTGCGTCGCGAACTGCTTGGCAGCGATGTCCGGTTCCGTGAAGACATTGGCCCACT
CCCAGGCGGTCTTTTTGCAATGGGAGAGGATACGGAAATCGTCAACCGTCTCTCCCGGAGCGGCGTGAAAACATATCGCT
GCGCTGAGGCCATCGTCCATCATTGGATTCCGGCCTCCAGCGTTACAGAGGCTTGGGTGCAAAAACGTGGGGAACGTCTT
GGCTATGGGATGCCGGCGCTTTTTGCTGAGGATATTCCCAAAGGTGTAAAGATTAGAGGAGTTCCCTTAAGGACCTGGGT
TGAGAGCGCCAACTGGGCAGTTCGGGCAGCCCTTCTCTATCCCTTGCCGCGATCAAAAAAACGGTTCTGGGCCATCTGGA
AGTACTACTACATGCGTGGCTATCGCGCGGGACTTCGCCAATACGCACCGACAGGAAATCCCTCTTGCCGAATGACGCAG
GAGATCGCGCGATGA

Upstream 100 bases:

>100_bases
GCCGAATAATGACAGTATTGAACCGCGGCGTCGACGGGAAGTGCCCCGGCTGCATAGACAGGGACCAGATTTCCTTTGCT
TCGGAAGGTGGGCTGATTTG

Downstream 100 bases:

>100_bases
AACTCTCCGTGCTGATCAACAATTTTAATTATGGGCAGTTCCTGCGCCCATGCATCGACAGCGTTCTGTCACAGGCCTAT
CCCGACGTCGAGGTGATCGC

Product: family 2 glycosyl transferase

Products: NA

Alternate protein names: Glycosyltransferase; Succinoglycan Biosynthesis Protein; Glycosyl Transferase Group 2 Family Protein; Glycosyltransferase Protein; Family Glycosyltransferase; Dolichyl-Phosphate Mannose Synthase Related Protein; Sulfatase; Glycosyltransferase Involved In Cell Wall Biogenesis; Group 2 Glycosyl Transferase; Arylsulfatase; Family 2 Glycosyl Transferase; Glycosyltransferase-Like; Glycosyl Transferase

Number of amino acids: Translated: 324; Mature: 323

Protein sequence:

>324_residues
MTGPRISVIFSSFNGASRRLQQMLDSMLAQNLSSEQWELIAVNNNSNDETQQLLDRYTKKLSMVVVNHARPGKSGAMNAA
LAVARGALIVFTDDDIEADVNWLSAIVACAAANPDFGVIGGRILPNWEHYPQGDPLLDWIPMGSTFAIADDESSGLCDPT
KIWGPNTTVRRELLGSDVRFREDIGPLPGGLFAMGEDTEIVNRLSRSGVKTYRCAEAIVHHWIPASSVTEAWVQKRGERL
GYGMPALFAEDIPKGVKIRGVPLRTWVESANWAVRAALLYPLPRSKKRFWAIWKYYYMRGYRAGLRQYAPTGNPSCRMTQ
EIAR

Sequences:

>Translated_324_residues
MTGPRISVIFSSFNGASRRLQQMLDSMLAQNLSSEQWELIAVNNNSNDETQQLLDRYTKKLSMVVVNHARPGKSGAMNAA
LAVARGALIVFTDDDIEADVNWLSAIVACAAANPDFGVIGGRILPNWEHYPQGDPLLDWIPMGSTFAIADDESSGLCDPT
KIWGPNTTVRRELLGSDVRFREDIGPLPGGLFAMGEDTEIVNRLSRSGVKTYRCAEAIVHHWIPASSVTEAWVQKRGERL
GYGMPALFAEDIPKGVKIRGVPLRTWVESANWAVRAALLYPLPRSKKRFWAIWKYYYMRGYRAGLRQYAPTGNPSCRMTQ
EIAR
>Mature_323_residues
TGPRISVIFSSFNGASRRLQQMLDSMLAQNLSSEQWELIAVNNNSNDETQQLLDRYTKKLSMVVVNHARPGKSGAMNAAL
AVARGALIVFTDDDIEADVNWLSAIVACAAANPDFGVIGGRILPNWEHYPQGDPLLDWIPMGSTFAIADDESSGLCDPTK
IWGPNTTVRRELLGSDVRFREDIGPLPGGLFAMGEDTEIVNRLSRSGVKTYRCAEAIVHHWIPASSVTEAWVQKRGERLG
YGMPALFAEDIPKGVKIRGVPLRTWVESANWAVRAALLYPLPRSKKRFWAIWKYYYMRGYRAGLRQYAPTGNPSCRMTQE
IAR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36075; Mature: 35943

Theoretical pI: Translated: 8.84; Mature: 8.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGPRISVIFSSFNGASRRLQQMLDSMLAQNLSSEQWELIAVNNNSNDETQQLLDRYTKK
CCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHH
LSMVVVNHARPGKSGAMNAALAVARGALIVFTDDDIEADVNWLSAIVACAAANPDFGVIG
HEEEEEECCCCCCCCHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCC
GRILPNWEHYPQGDPLLDWIPMGSTFAIADDESSGLCDPTKIWGPNTTVRRELLGSDVRF
CEECCCCCCCCCCCCCEEEECCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHCCCCEE
REDIGPLPGGLFAMGEDTEIVNRLSRSGVKTYRCAEAIVHHWIPASSVTEAWVQKRGERL
HHHCCCCCCCEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHC
GYGMPALFAEDIPKGVKIRGVPLRTWVESANWAVRAALLYPLPRSKKRFWAIWKYYYMRG
CCCCCHHHHHHCCCCCEEECCCHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHH
YRAGLRQYAPTGNPSCRMTQEIAR
HHHHHHHCCCCCCCCCCHHHHHCC
>Mature Secondary Structure 
TGPRISVIFSSFNGASRRLQQMLDSMLAQNLSSEQWELIAVNNNSNDETQQLLDRYTKK
CCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHH
LSMVVVNHARPGKSGAMNAALAVARGALIVFTDDDIEADVNWLSAIVACAAANPDFGVIG
HEEEEEECCCCCCCCHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCC
GRILPNWEHYPQGDPLLDWIPMGSTFAIADDESSGLCDPTKIWGPNTTVRRELLGSDVRF
CEECCCCCCCCCCCCCEEEECCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHCCCCEE
REDIGPLPGGLFAMGEDTEIVNRLSRSGVKTYRCAEAIVHHWIPASSVTEAWVQKRGERL
HHHCCCCCCCEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHC
GYGMPALFAEDIPKGVKIRGVPLRTWVESANWAVRAALLYPLPRSKKRFWAIWKYYYMRG
CCCCCHHHHHHCCCCCEEECCCHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHH
YRAGLRQYAPTGNPSCRMTQEIAR
HHHHHHHCCCCCCCCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA