Definition Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome.
Accession NC_011369
Length 4,537,948

Click here to switch to the map view.

The map label for this gene is 209550428

Identifier: 209550428

GI number: 209550428

Start: 2899220

End: 2900209

Strand: Direct

Name: 209550428

Synonym: Rleg2_2849

Alternate gene names: NA

Gene position: 2899220-2900209 (Clockwise)

Preceding gene: 209550424

Following gene: 209550431

Centisome position: 63.89

GC content: 61.92

Gene sequence:

>990_bases
ATGTCTCGTCCCCTCCTCTCCGCCTGTCTGGCTGTCTCCTTCCTTCTGCCTGTCACGGCAGAGGCGGTCGACCGGCCGAA
ACAGCTGGTCATCATCTCCTTCGACGGCGCCCACGACAATGCGCTCTGGCTGAAAAGCCGCGAGATGGCCGTAAAGAACG
GCGCCCATTTCACCTATTTCCTCTCCTGCACCTTCCTGATGAACGAGGCGGCGAAGAAGGCCTACCAGGCGCCGCACCAG
AGACGCGGAAAATCCAATGTCGGCTTCGCCCAGAGCGACGACGAGATCCGCGAACGCCTCGGCAATATTTGGCACGCCCA
TCTCGAAGGTCACGACATATCGAGCCACGCCTGCGGCCATTTCGATGGCCGCGAGTGGAGCGAGGCCGATTGGTCGGCCG
AATACGCCACCTTCCACACCACCCTGAAGAATGCTTGGAAAGGCGTCGGTCTGGACGAGCCGGCCGGCTGGCAGGATCTC
GTCGATCACGGCATCAAGGGTTTCCGCGCCCCCTACCTCTCCGCGACCGCGGGAGCCGACATGATTGCCGCCGAAAAGAA
GGCGGGCTTCAGCTATGACGCGAGCCTCGTCACCAAAGGCCCGGCCATGCCTGTCGAGGAAGACGGCATCATCCGCTTCG
GCCTGCCGCTGATCCCCGAAGGCCCAAGCGAAAAGCCGATCATCGGCATGGACTACAATCTCTTCGTGCGCCATTCGAAA
GGCGAGGAAGACACCGCAGACAGTTCAGCCTTCGAGCAGCGCGCCTATTCAGCCTTCAAAGAGGCTTTTGACAAGCAATA
TGCCGGAAGCCGAATCCCCCTCCAGCTCGGCTTCCACTTCGTCGAGATGAACGGCGGCGCCTACTGGCGCGCCCTCGACC
GTCTGGTCAGCGACGTCTGCCATCGAGCCGACGTCGCCTGCGTCAGCTATTCGGAAGCGATCCCGATGATCGAGGCGCGC
GGAAGATTGCAGCAGACGTCGGGGCTATGA

Upstream 100 bases:

>100_bases
TGTCATGGCTTAGCGGCTGGCGGGAAAAAATACCAGTTGAGACCGCAGCTTCGCCGCAATTCTATCGGAGGGAAACCGCG
AACAAATTGTCGCGGTGCCC

Downstream 100 bases:

>100_bases
CGGGATAGTTTTTAAAGCGAAACGTCGAACCGAGCGGCCCCCTCATCCGGCTACCGCCACCTCTCCCCGCTGGGGAGAAG
AGACAAGCAGCGGCGTCTCA

Product: hypothetical protein

Products: NA

Alternate protein names: Polysaccharide Deacetylase; Lipoprotein

Number of amino acids: Translated: 329; Mature: 328

Protein sequence:

>329_residues
MSRPLLSACLAVSFLLPVTAEAVDRPKQLVIISFDGAHDNALWLKSREMAVKNGAHFTYFLSCTFLMNEAAKKAYQAPHQ
RRGKSNVGFAQSDDEIRERLGNIWHAHLEGHDISSHACGHFDGREWSEADWSAEYATFHTTLKNAWKGVGLDEPAGWQDL
VDHGIKGFRAPYLSATAGADMIAAEKKAGFSYDASLVTKGPAMPVEEDGIIRFGLPLIPEGPSEKPIIGMDYNLFVRHSK
GEEDTADSSAFEQRAYSAFKEAFDKQYAGSRIPLQLGFHFVEMNGGAYWRALDRLVSDVCHRADVACVSYSEAIPMIEAR
GRLQQTSGL

Sequences:

>Translated_329_residues
MSRPLLSACLAVSFLLPVTAEAVDRPKQLVIISFDGAHDNALWLKSREMAVKNGAHFTYFLSCTFLMNEAAKKAYQAPHQ
RRGKSNVGFAQSDDEIRERLGNIWHAHLEGHDISSHACGHFDGREWSEADWSAEYATFHTTLKNAWKGVGLDEPAGWQDL
VDHGIKGFRAPYLSATAGADMIAAEKKAGFSYDASLVTKGPAMPVEEDGIIRFGLPLIPEGPSEKPIIGMDYNLFVRHSK
GEEDTADSSAFEQRAYSAFKEAFDKQYAGSRIPLQLGFHFVEMNGGAYWRALDRLVSDVCHRADVACVSYSEAIPMIEAR
GRLQQTSGL
>Mature_328_residues
SRPLLSACLAVSFLLPVTAEAVDRPKQLVIISFDGAHDNALWLKSREMAVKNGAHFTYFLSCTFLMNEAAKKAYQAPHQR
RGKSNVGFAQSDDEIRERLGNIWHAHLEGHDISSHACGHFDGREWSEADWSAEYATFHTTLKNAWKGVGLDEPAGWQDLV
DHGIKGFRAPYLSATAGADMIAAEKKAGFSYDASLVTKGPAMPVEEDGIIRFGLPLIPEGPSEKPIIGMDYNLFVRHSKG
EEDTADSSAFEQRAYSAFKEAFDKQYAGSRIPLQLGFHFVEMNGGAYWRALDRLVSDVCHRADVACVSYSEAIPMIEARG
RLQQTSGL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36345; Mature: 36214

Theoretical pI: Translated: 6.19; Mature: 6.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRPLLSACLAVSFLLPVTAEAVDRPKQLVIISFDGAHDNALWLKSREMAVKNGAHFTYF
CCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEECHHHHHHCCCCEEEE
LSCTFLMNEAAKKAYQAPHQRRGKSNVGFAQSDDEIRERLGNIWHAHLEGHDISSHACGH
EHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCCCHHHHHHHHHHEEEECCCCCCCCCCCCC
FDGREWSEADWSAEYATFHTTLKNAWKGVGLDEPAGWQDLVDHGIKGFRAPYLSATAGAD
CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHCCCH
MIAAEKKAGFSYDASLVTKGPAMPVEEDGIIRFGLPLIPEGPSEKPIIGMDYNLFVRHSK
HHHHHHHCCCCCCCHHEECCCCCCCCCCCEEEECCCCCCCCCCCCCEEECCCEEEEEECC
GEEDTADSSAFEQRAYSAFKEAFDKQYAGSRIPLQLGFHFVEMNGGAYWRALDRLVSDVC
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECEEEEEECCCHHHHHHHHHHHHHH
HRADVACVSYSEAIPMIEARGRLQQTSGL
HHCCHHEEEHHHCCCHHHHCCCHHHCCCC
>Mature Secondary Structure 
SRPLLSACLAVSFLLPVTAEAVDRPKQLVIISFDGAHDNALWLKSREMAVKNGAHFTYF
CCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEECHHHHHHCCCCEEEE
LSCTFLMNEAAKKAYQAPHQRRGKSNVGFAQSDDEIRERLGNIWHAHLEGHDISSHACGH
EHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCCCHHHHHHHHHHEEEECCCCCCCCCCCCC
FDGREWSEADWSAEYATFHTTLKNAWKGVGLDEPAGWQDLVDHGIKGFRAPYLSATAGAD
CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHCCCH
MIAAEKKAGFSYDASLVTKGPAMPVEEDGIIRFGLPLIPEGPSEKPIIGMDYNLFVRHSK
HHHHHHHCCCCCCCHHEECCCCCCCCCCCEEEECCCCCCCCCCCCCEEECCCEEEEEECC
GEEDTADSSAFEQRAYSAFKEAFDKQYAGSRIPLQLGFHFVEMNGGAYWRALDRLVSDVC
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECEEEEEECCCHHHHHHHHHHHHHH
HRADVACVSYSEAIPMIEARGRLQQTSGL
HHCCHHEEEHHHCCCHHHHCCCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA