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The map label for this gene is nolR [H]

Identifier: 209550406

GI number: 209550406

Start: 2875471

End: 2875788

Strand: Direct

Name: nolR [H]

Synonym: Rleg2_2827

Alternate gene names: 209550406

Gene position: 2875471-2875788 (Clockwise)

Preceding gene: 209550405

Following gene: 209550407

Centisome position: 63.37

GC content: 57.23

Gene sequence:

>318_bases
ATGGAAACCACTGATTTGGCCGATCACACCAATGTGGCGGCAGCTTTATTGTCGGCCATGGCAAATCCCAAGAGATTGCT
GATCCTGTGCAGCCTGGTGAAGGGCGAAGTGGCCGTCGGCGTGCTTGCAACGCAGGTCGGCCTCAGCCAGTCGGCACTCT
CCCAGCATCTGTCGAAACTGCGCGCACAGAAGCTGGTCAAGACGCGCCGTGACGCACAGACCATCTATTATTCCAGCACC
TCCGAGCCGGTCATGAAGATCCTGGCAACGCTCGAAGACATCTACCTGGTGACGAACAGGAACAGATCCGCCGCTTAA

Upstream 100 bases:

>100_bases
TCTTCGACCCCAATTGCTAGTTTTTGGGCGTCGGTCAAAATCCGACTGACGGCCAGCGCCAACAAGCATGATGTACGTTT
CGCATTAGGAAGATAACAAT

Downstream 100 bases:

>100_bases
TGATAGCGCTGACATGAATGTCGGCCGATGCCATGCCGCAAGGGGATGTTCCCGGAGGCGCGGCAACGATATTTCAGCAC
GTGAACCTTATGGCACGACC

Product: ArsR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 105; Mature: 105

Protein sequence:

>105_residues
METTDLADHTNVAAALLSAMANPKRLLILCSLVKGEVAVGVLATQVGLSQSALSQHLSKLRAQKLVKTRRDAQTIYYSST
SEPVMKILATLEDIYLVTNRNRSAA

Sequences:

>Translated_105_residues
METTDLADHTNVAAALLSAMANPKRLLILCSLVKGEVAVGVLATQVGLSQSALSQHLSKLRAQKLVKTRRDAQTIYYSST
SEPVMKILATLEDIYLVTNRNRSAA
>Mature_105_residues
METTDLADHTNVAAALLSAMANPKRLLILCSLVKGEVAVGVLATQVGLSQSALSQHLSKLRAQKLVKTRRDAQTIYYSST
SEPVMKILATLEDIYLVTNRNRSAA

Specific function: Negative transacting factor controlling the nod regulon. May control the expression of nodD1, nodD2, nodD3 and nodABC genes [H]

COG id: COG0640

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH arsR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1789021, Length=84, Percent_Identity=51.1904761904762, Blast_Score=78, Evalue=1e-16,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001845
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01022 HTH_5 [H]

EC number: NA

Molecular weight: Translated: 11355; Mature: 11355

Theoretical pI: Translated: 9.97; Mature: 9.97

Prosite motif: PS50987 HTH_ARSR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METTDLADHTNVAAALLSAMANPKRLLILCSLVKGEVAVGVLATQVGLSQSALSQHLSKL
CCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHH
RAQKLVKTRRDAQTIYYSSTSEPVMKILATLEDIYLVTNRNRSAA
HHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHEECCCCCCC
>Mature Secondary Structure
METTDLADHTNVAAALLSAMANPKRLLILCSLVKGEVAVGVLATQVGLSQSALSQHLSKL
CCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHH
RAQKLVKTRRDAQTIYYSSTSEPVMKILATLEDIYLVTNRNRSAA
HHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1840615 [H]