Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
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Accession | NC_011369 |
Length | 4,537,948 |
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The map label for this gene is 209550405
Identifier: 209550405
GI number: 209550405
Start: 2874605
End: 2875354
Strand: Direct
Name: 209550405
Synonym: Rleg2_2826
Alternate gene names: NA
Gene position: 2874605-2875354 (Clockwise)
Preceding gene: 209550404
Following gene: 209550406
Centisome position: 63.35
GC content: 60.0
Gene sequence:
>750_bases ATGAAAGATCAGCCCTCGCCCATACGCGAAACCGACGATGACGCCCGCAAACTCGCCCGCGTGCTTCTGCGCTCCGCGCG GCACGCGGCGATTGCCGTTCTCGACCCCGAGACCGGCTTTCCCTTCGCCAGCCGCGTGCTCGTCGCCACCGATATAGACG GCGCCCCCGTCATTCTCGTTTCGAAGCTCTCTGCCCATACCAAAGCACTCGCCAGGGACGCGCGCGCCTCACTGCTGACA GGCGAGCCCGGCAAGGGCGATCCGCTCGCCCACCCTCGCCTGACGACCCAATGCCTGGCGCAACCCGTCGATCGCGGCGA CGCCTTCCACGAACGTATCCGCACGCGTTTTCTCGCGCGCCACGCCAAGGCAAAGCTTTATATCGACTTTCCCGATTTCC TCTTCTTCCGCCTTAAACCCGAGCAGGCCAGCCTCAATGGCGGCTTCGGCCGCGCCTACCAGCTCGATGGGAACGACCTC ATTATCCAGTCGGCTGCGAATGAGGAGATTGCCGCCGGCGCGGCAGAAACAGTGCGAGATTTAGTAGAACGCCACCCCGA TGTGGCCGAGGCCCTTGCTGCCAGGCTGAAGGCACCGGAATCGGCTTCCTGGCGCATTTGTGGTATCGATCTCTCAGGTT TTGATATGATTTCCGGCGATTTTCTGCTGCGATATGAATTCGAAACCCTCGCTGGGGATGCCGATCACATTTGTTCAAAC ATATCTAAAATAGCATACTCGATACCTTAA
Upstream 100 bases:
>100_bases GTTGGCACCATCTCGGCCCAGGATATCGTCGCCGGCCTTACCCGCCATCGCCGCAAGCAGGACGCTTGATGTTTTCAAGC CGCTTTGCCACAAAGCGGAT
Downstream 100 bases:
>100_bases ATTTAGGTATATACAATCTTCGACCCCAATTGCTAGTTTTTGGGCGTCGGTCAAAATCCGACTGACGGCCAGCGCCAACA AGCATGATGTACGTTTCGCA
Product: pyridoxamine 5'-phosphate oxidase-like FMN-binding protein
Products: NA
Alternate protein names: Pyridoxamine Oxidase Protein; Heme Iron Utilization Protein; Pyridoxamine 5-Phosphate Oxidase-Like Protein; Pyridoxamine 5-Phosphate Oxidase
Number of amino acids: Translated: 249; Mature: 249
Protein sequence:
>249_residues MKDQPSPIRETDDDARKLARVLLRSARHAAIAVLDPETGFPFASRVLVATDIDGAPVILVSKLSAHTKALARDARASLLT GEPGKGDPLAHPRLTTQCLAQPVDRGDAFHERIRTRFLARHAKAKLYIDFPDFLFFRLKPEQASLNGGFGRAYQLDGNDL IIQSAANEEIAAGAAETVRDLVERHPDVAEALAARLKAPESASWRICGIDLSGFDMISGDFLLRYEFETLAGDADHICSN ISKIAYSIP
Sequences:
>Translated_249_residues MKDQPSPIRETDDDARKLARVLLRSARHAAIAVLDPETGFPFASRVLVATDIDGAPVILVSKLSAHTKALARDARASLLT GEPGKGDPLAHPRLTTQCLAQPVDRGDAFHERIRTRFLARHAKAKLYIDFPDFLFFRLKPEQASLNGGFGRAYQLDGNDL IIQSAANEEIAAGAAETVRDLVERHPDVAEALAARLKAPESASWRICGIDLSGFDMISGDFLLRYEFETLAGDADHICSN ISKIAYSIP >Mature_249_residues MKDQPSPIRETDDDARKLARVLLRSARHAAIAVLDPETGFPFASRVLVATDIDGAPVILVSKLSAHTKALARDARASLLT GEPGKGDPLAHPRLTTQCLAQPVDRGDAFHERIRTRFLARHAKAKLYIDFPDFLFFRLKPEQASLNGGFGRAYQLDGNDL IIQSAANEEIAAGAAETVRDLVERHPDVAEALAARLKAPESASWRICGIDLSGFDMISGDFLLRYEFETLAGDADHICSN ISKIAYSIP
Specific function: Unknown
COG id: COG0748
COG function: function code P; Putative heme iron utilization protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27172; Mature: 27172
Theoretical pI: Translated: 6.40; Mature: 6.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKDQPSPIRETDDDARKLARVLLRSARHAAIAVLDPETGFPFASRVLVATDIDGAPVILV CCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHEEEEEECCCCCCEEEE SKLSAHTKALARDARASLLTGEPGKGDPLAHPRLTTQCLAQPVDRGDAFHERIRTRFLAR EHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHH HAKAKLYIDFPDFLFFRLKPEQASLNGGFGRAYQLDGNDLIIQSAANEEIAAGAAETVRD HCCCEEEEECCCCEEEEECCCCCCCCCCCCEEEEECCCEEEEEECCCCHHHCCHHHHHHH LVERHPDVAEALAARLKAPESASWRICGIDLSGFDMISGDFLLRYEFETLAGDADHICSN HHHCCCCHHHHHHHHHCCCCCCCEEEEEEECCCCEEECCCEEEEEEHHHHCCCHHHHHHH ISKIAYSIP HHHHHCCCC >Mature Secondary Structure MKDQPSPIRETDDDARKLARVLLRSARHAAIAVLDPETGFPFASRVLVATDIDGAPVILV CCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHEEEEEECCCCCCEEEE SKLSAHTKALARDARASLLTGEPGKGDPLAHPRLTTQCLAQPVDRGDAFHERIRTRFLAR EHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHH HAKAKLYIDFPDFLFFRLKPEQASLNGGFGRAYQLDGNDLIIQSAANEEIAAGAAETVRD HCCCEEEEECCCCEEEEECCCCCCCCCCCCEEEEECCCEEEEEECCCCHHHCCHHHHHHH LVERHPDVAEALAARLKAPESASWRICGIDLSGFDMISGDFLLRYEFETLAGDADHICSN HHHCCCCHHHHHHHHHCCCCCCCEEEEEEECCCCEEECCCEEEEEEHHHHCCCHHHHHHH ISKIAYSIP HHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA