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The map label for this gene is yehC [H]

Identifier: 209397389

GI number: 209397389

Start: 21762

End: 22445

Strand: Reverse

Name: yehC [H]

Synonym: ECH74115_0023

Alternate gene names: 209397389

Gene position: 22445-21762 (Counterclockwise)

Preceding gene: 209396234

Following gene: 209396625

Centisome position: 0.4

GC content: 36.55

Gene sequence:

>684_bases
GTGAGAATAATAACAGCATTACTGATGTCATTTTTTATTTTACCTGTTCATGCCGGTGTGGTCATCTATGGTACGCGCAT
TATTTATCCGGAAAAAAACAGAGAAGTTCTCGTACAGTTAATGAATCAAAGTAAAAATGCCTCTTTGATTCAGGCATGGA
TCGATGATGGGAACACCACTATCGCGCCAGAAAAAATTCAGGTCACATTTATTCTCACACCGCCAGTAAGTCGTGTAGCA
GGTGGTTCTGGCCAACAACTTAAAATAAGAAAAATGCCAAACAATTTGCCTCACAATAAAGAAAGTTTATTTTATCTAAA
TGTTCTGGATATCCCTCCAAACAATCCACAAAATGCAGGGAAAAACAAAATTAAACTTGCATTGCAAAACCGGATAAAGT
TACTTTGGCGTCCAAGCGGAATAGCTCCGGTAGATAAAAAAAGCCTTTCTCAATTAAATATCAAAAAGAAAAATAACGCC
ATCTCAATAAACAACGAAACAGCCAACTGGATAACGGTTACAACTATCAAAGCACAAAACGTGAAAGTTAATAATGAAAG
TATCTTACTGCCTCCCTTTTCGCATAACGACATTACATTAAAAAATAACCACGCATCAGAATATGAACTAACGGTAGTTG
ATGATTACGGGAATAACATCCATAGTAAAATCGCCGCGAGATAA

Upstream 100 bases:

>100_bases
ACAAAAGGCTCCGTAGAGTCAACCGTAACGATTAAAATCAGTGCAGATTAACGTTTTTTGCCGGTAGCTCTGCTACCGGT
ATTATTTACGGAGTGATTAC

Downstream 100 bases:

>100_bases
CAGGAAAAAGTCATGTTAAGGACGACACGATGGGTCGCTGCTATTATTTTTTTGTATTCTTTTCCGGGTTATGCTGAAGA
AACTTTTGATACGCACTTTA

Product: pili assembly chaperone

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 227; Mature: 227

Protein sequence:

>227_residues
MRIITALLMSFFILPVHAGVVIYGTRIIYPEKNREVLVQLMNQSKNASLIQAWIDDGNTTIAPEKIQVTFILTPPVSRVA
GGSGQQLKIRKMPNNLPHNKESLFYLNVLDIPPNNPQNAGKNKIKLALQNRIKLLWRPSGIAPVDKKSLSQLNIKKKNNA
ISINNETANWITVTTIKAQNVKVNNESILLPPFSHNDITLKNNHASEYELTVVDDYGNNIHSKIAAR

Sequences:

>Translated_227_residues
MRIITALLMSFFILPVHAGVVIYGTRIIYPEKNREVLVQLMNQSKNASLIQAWIDDGNTTIAPEKIQVTFILTPPVSRVA
GGSGQQLKIRKMPNNLPHNKESLFYLNVLDIPPNNPQNAGKNKIKLALQNRIKLLWRPSGIAPVDKKSLSQLNIKKKNNA
ISINNETANWITVTTIKAQNVKVNNESILLPPFSHNDITLKNNHASEYELTVVDDYGNNIHSKIAAR
>Mature_227_residues
MRIITALLMSFFILPVHAGVVIYGTRIIYPEKNREVLVQLMNQSKNASLIQAWIDDGNTTIAPEKIQVTFILTPPVSRVA
GGSGQQLKIRKMPNNLPHNKESLFYLNVLDIPPNNPQNAGKNKIKLALQNRIKLLWRPSGIAPVDKKSLSQLNIKKKNNA
ISINNETANWITVTTIKAQNVKVNNESILLPPFSHNDITLKNNHASEYELTVVDDYGNNIHSKIAAR

Specific function: Could be required for the biogenesis of a putative fimbria [H]

COG id: COG3121

COG function: function code NU; P pilus assembly protein, chaperone PapD

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Ig-like (immunoglobulin-like) domain [H]

Homologues:

Organism=Escherichia coli, GI1788428, Length=224, Percent_Identity=55.8035714285714, Blast_Score=278, Evalue=2e-76,
Organism=Escherichia coli, GI1789532, Length=222, Percent_Identity=28.3783783783784, Blast_Score=106, Evalue=1e-24,
Organism=Escherichia coli, GI1786333, Length=221, Percent_Identity=30.7692307692308, Blast_Score=105, Evalue=3e-24,
Organism=Escherichia coli, GI1790771, Length=204, Percent_Identity=29.9019607843137, Blast_Score=103, Evalue=8e-24,
Organism=Escherichia coli, GI1788677, Length=203, Percent_Identity=32.0197044334975, Blast_Score=92, Evalue=2e-20,
Organism=Escherichia coli, GI1786936, Length=217, Percent_Identity=26.2672811059908, Blast_Score=90, Evalue=1e-19,
Organism=Escherichia coli, GI87082203, Length=228, Percent_Identity=29.3859649122807, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI1787171, Length=204, Percent_Identity=27.4509803921569, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1786743, Length=227, Percent_Identity=28.1938325991189, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI87081806, Length=220, Percent_Identity=24.0909090909091, Blast_Score=68, Evalue=6e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008962
- InterPro:   IPR001829
- InterPro:   IPR016148
- InterPro:   IPR018046
- InterPro:   IPR016147 [H]

Pfam domain/function: PF02753 Pili_assembly_C; PF00345 Pili_assembly_N [H]

EC number: NA

Molecular weight: Translated: 25402; Mature: 25402

Theoretical pI: Translated: 10.58; Mature: 10.58

Prosite motif: PS00635 PILI_CHAPERONE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIITALLMSFFILPVHAGVVIYGTRIIYPEKNREVLVQLMNQSKNASLIQAWIDDGNTT
CHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCCHHHHHHHHCCCCCCEEEEEEECCCCCE
IAPEKIQVTFILTPPVSRVAGGSGQQLKIRKMPNNLPHNKESLFYLNVLDIPPNNPQNAG
ECCCEEEEEEEECCCHHHHCCCCCCEEEEEECCCCCCCCCCEEEEEEEEECCCCCCCCCC
KNKIKLALQNRIKLLWRPSGIAPVDKKSLSQLNIKKKNNAISINNETANWITVTTIKAQN
CCEEEEEEECCEEEEECCCCCCCCCCHHHHHEEEEECCCEEEEECCCCCEEEEEEEEECE
VKVNNESILLPPFSHNDITLKNNHASEYELTVVDDYGNNIHSKIAAR
EEECCCEEEECCCCCCCEEEECCCCCEEEEEEEECCCCCHHHHHCCC
>Mature Secondary Structure
MRIITALLMSFFILPVHAGVVIYGTRIIYPEKNREVLVQLMNQSKNASLIQAWIDDGNTT
CHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCCHHHHHHHHCCCCCCEEEEEEECCCCCE
IAPEKIQVTFILTPPVSRVAGGSGQQLKIRKMPNNLPHNKESLFYLNVLDIPPNNPQNAG
ECCCEEEEEEEECCCHHHHCCCCCCEEEEEECCCCCCCCCCEEEEEEEEECCCCCCCCCC
KNKIKLALQNRIKLLWRPSGIAPVDKKSLSQLNIKKKNNAISINNETANWITVTTIKAQN
CCEEEEEEECCEEEEECCCCCCCCCCHHHHHEEEEECCCEEEEECCCCCEEEEEEEEECE
VKVNNESILLPPFSHNDITLKNNHASEYELTVVDDYGNNIHSKIAAR
EEECCCEEEECCCCCCCEEEECCCCCEEEEEEEECCCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]