Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
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Accession | NC_011353 |
Length | 5,572,075 |
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The map label for this gene is 209396625
Identifier: 209396625
GI number: 209396625
Start: 18326
End: 18853
Strand: Reverse
Name: 209396625
Synonym: ECH74115_0019
Alternate gene names: NA
Gene position: 18853-18326 (Counterclockwise)
Preceding gene: 209397389
Following gene: 209397043
Centisome position: 0.34
GC content: 37.12
Gene sequence:
>528_bases TTGTTGTTCGAAATTGAAGTGAGTTCATGTACAGGGAATAATACTAATTGTAATAGCGTCCGCTTTAATTTTAATTTAAA TACTATTTTACAGGTAAATTTAATGACCTGTGGTTTTGAAGATCAATCCATCGACACTGGACGATTTGTACTGTCTCGTA TCAATAATGAAAATTATCAGTTTCATCATATAAGATTTGACTGCATCCAGGGCGAGCAAGGTGAATTAGTTTTTGAACCC AGTGACGTTGAATATTACTTTGAACCAGTGACGATACAGGAGTCAGGAACCAGCATATTAAAAAATGAGTTAGAAAACAG TGAGGACGGTGCGGGTCAAATAGGCTTTCAACTCTCCAATGATGGTACGAATGAAATCCAGTATGGTAAAAGCAATTACT ACTCTTTTCAGCATCCCCATGAAGGAAGTAATCAGATTCCTCTATTTATTCGCCCGCGTACATATGGAAACAATGTCTCA AGCGGGCAAATAATGAGCCGAGTCAAAATCGTGGTAATGTACAACTAA
Upstream 100 bases:
>100_bases AGAAATGCTATCTGCGATAAATTTCACCATTCCATACTCTATCGCATCTGTATCAGATAGTTCCAACACCGCAGATATTT TTCCAGGAACTCCTTTTCCT
Downstream 100 bases:
>100_bases TCTATCTCCCCCACCTTAACTTTGGGGGAGCTGCCGATTAACGCACCGCTGGACTAAAAAGCGCAGAATAATCCGTATTG CAGATTCGCTGTACCGCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 175; Mature: 175
Protein sequence:
>175_residues MLFEIEVSSCTGNNTNCNSVRFNFNLNTILQVNLMTCGFEDQSIDTGRFVLSRINNENYQFHHIRFDCIQGEQGELVFEP SDVEYYFEPVTIQESGTSILKNELENSEDGAGQIGFQLSNDGTNEIQYGKSNYYSFQHPHEGSNQIPLFIRPRTYGNNVS SGQIMSRVKIVVMYN
Sequences:
>Translated_175_residues MLFEIEVSSCTGNNTNCNSVRFNFNLNTILQVNLMTCGFEDQSIDTGRFVLSRINNENYQFHHIRFDCIQGEQGELVFEP SDVEYYFEPVTIQESGTSILKNELENSEDGAGQIGFQLSNDGTNEIQYGKSNYYSFQHPHEGSNQIPLFIRPRTYGNNVS SGQIMSRVKIVVMYN >Mature_175_residues MLFEIEVSSCTGNNTNCNSVRFNFNLNTILQVNLMTCGFEDQSIDTGRFVLSRINNENYQFHHIRFDCIQGEQGELVFEP SDVEYYFEPVTIQESGTSILKNELENSEDGAGQIGFQLSNDGTNEIQYGKSNYYSFQHPHEGSNQIPLFIRPRTYGNNVS SGQIMSRVKIVVMYN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19965; Mature: 19965
Theoretical pI: Translated: 4.36; Mature: 4.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFEIEVSSCTGNNTNCNSVRFNFNLNTILQVNLMTCGFEDQSIDTGRFVLSRINNENYQ CEEEEEECCCCCCCCCCCEEEEEECCCEEEEEEEEEECCCCCCCCCHHEEEEEECCCCEE FHHIRFDCIQGEQGELVFEPSDVEYYFEPVTIQESGTSILKNELENSEDGAGQIGFQLSN EEEEEEEEEECCCCCEEECCCCCEEEEEEEEEECCCCHHHHHHHCCCCCCCCEEEEEECC DGTNEIQYGKSNYYSFQHPHEGSNQIPLFIRPRTYGNNVSSGQIMSRVKIVVMYN CCCCCEEECCCCCEEEECCCCCCCCCEEEEECCCCCCCCCCCEEEEEEEEEEEEC >Mature Secondary Structure MLFEIEVSSCTGNNTNCNSVRFNFNLNTILQVNLMTCGFEDQSIDTGRFVLSRINNENYQ CEEEEEECCCCCCCCCCCEEEEEECCCEEEEEEEEEECCCCCCCCCHHEEEEEECCCCEE FHHIRFDCIQGEQGELVFEPSDVEYYFEPVTIQESGTSILKNELENSEDGAGQIGFQLSN EEEEEEEEEECCCCCEEECCCCCEEEEEEEEEECCCCHHHHHHHCCCCCCCCEEEEEECC DGTNEIQYGKSNYYSFQHPHEGSNQIPLFIRPRTYGNNVSSGQIMSRVKIVVMYN CCCCCEEECCCCCEEEECCCCCCCCCEEEEECCCCCCCCCCCEEEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA