Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
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Accession | NC_011353 |
Length | 5,572,075 |
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The map label for this gene is 209397336
Identifier: 209397336
GI number: 209397336
Start: 5237351
End: 5238034
Strand: Reverse
Name: 209397336
Synonym: ECH74115_5598
Alternate gene names: NA
Gene position: 5238034-5237351 (Counterclockwise)
Preceding gene: 209397860
Following gene: 209396544
Centisome position: 94.01
GC content: 52.34
Gene sequence:
>684_bases ATGAAACGCTCCGCTATAAACGACATTCTCGGCCATACACGGCAATTCTTTTCGCAACATGACGTACATCTGCCGCCCTT TGCCAGTTTCTCGCCTGCTCAATGGCAGCAGCTCGACACCGCCGCGTGGGAGGAGGTTTTTGATCTTAAACTCGGCTGGG ATGTTACCGCTTTTGGTCGCAACAACTTTGCAGCACACGGGCTGACGCTGTTTACCCTACGTAACGGCTCAGCAAAAGGA ATGCCGTATGTGAAATGTTACGCCGAGAAGATCATGCATGTGCGCGATGCGCAGGTCACGCCAATGCATTTTCACTGGCG TAAGCGTGAGGACATTATCAATCGCGGCGGCGGTAATTTAATTGTTGAACTGTGGAATGCCGATAGTAACGAGCAAACGG CTGATAGTGACATTACGGTGGTGATAGACGGCTGCCGCCAGAAACATACTGCAGGCTCTCAGTTGCGCCTGTCTCCCGGC GAAAGTATCTGCCTGCCGCCCGGCCTGTATCACAGCTTTTGGGCAGAAGCCGGTTTTGGCGATGTGCTGGTTGGCGAAGT CTCTTCTGTTAATGACGACGACCACGATAACCACTTTTTACAGCCACTGGACCGCTACAACCTGATTGACGAAGACGAAC CTGCACAGTTGGTATTGTGTAACGAATACCGCCAGTTCCGCTGA
Upstream 100 bases:
>100_bases CGATAAAAACAACGTCGGCAATTACAAAGGCTGGACGGTGAAATAAGTCCACACGCCGGGCGGCGCAGCTGCCCGGTCAC CGCTAAGGAGAACGCTTTCG
Downstream 100 bases:
>100_bases ATAAGGATAACGTTATGCCATTGATTTCTCTCGCTGAAGGGCTGGCACATGCCCGCGAACATCACTATTCGTTAGGTGCG TTTAATGTGCTGGACTCGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 227; Mature: 227
Protein sequence:
>227_residues MKRSAINDILGHTRQFFSQHDVHLPPFASFSPAQWQQLDTAAWEEVFDLKLGWDVTAFGRNNFAAHGLTLFTLRNGSAKG MPYVKCYAEKIMHVRDAQVTPMHFHWRKREDIINRGGGNLIVELWNADSNEQTADSDITVVIDGCRQKHTAGSQLRLSPG ESICLPPGLYHSFWAEAGFGDVLVGEVSSVNDDDHDNHFLQPLDRYNLIDEDEPAQLVLCNEYRQFR
Sequences:
>Translated_227_residues MKRSAINDILGHTRQFFSQHDVHLPPFASFSPAQWQQLDTAAWEEVFDLKLGWDVTAFGRNNFAAHGLTLFTLRNGSAKG MPYVKCYAEKIMHVRDAQVTPMHFHWRKREDIINRGGGNLIVELWNADSNEQTADSDITVVIDGCRQKHTAGSQLRLSPG ESICLPPGLYHSFWAEAGFGDVLVGEVSSVNDDDHDNHFLQPLDRYNLIDEDEPAQLVLCNEYRQFR >Mature_227_residues MKRSAINDILGHTRQFFSQHDVHLPPFASFSPAQWQQLDTAAWEEVFDLKLGWDVTAFGRNNFAAHGLTLFTLRNGSAKG MPYVKCYAEKIMHVRDAQVTPMHFHWRKREDIINRGGGNLIVELWNADSNEQTADSDITVVIDGCRQKHTAGSQLRLSPG ESICLPPGLYHSFWAEAGFGDVLVGEVSSVNDDDHDNHFLQPLDRYNLIDEDEPAQLVLCNEYRQFR
Specific function: Unknown
COG id: COG3822
COG function: function code R; ABC-type sugar transport system, auxiliary component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25798; Mature: 25798
Theoretical pI: Translated: 5.48; Mature: 5.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRSAINDILGHTRQFFSQHDVHLPPFASFSPAQWQQLDTAAWEEVFDLKLGWDVTAFGR CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEECCCEEEEECC NNFAAHGLTLFTLRNGSAKGMPYVKCYAEKIMHVRDAQVTPMHFHWRKREDIINRGGGNL CCCEECCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCEEECCHHHHHHHHCCCCEE IVELWNADSNEQTADSDITVVIDGCRQKHTAGSQLRLSPGESICLPPGLYHSFWAEAGFG EEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCEEEECCCCCEECCCCHHHHHHHCCCCC DVLVGEVSSVNDDDHDNHFLQPLDRYNLIDEDEPAQLVLCNEYRQFR CEEECCCCCCCCCCCCCHHHCHHHHCCCCCCCCCCEEEEECCHHCCC >Mature Secondary Structure MKRSAINDILGHTRQFFSQHDVHLPPFASFSPAQWQQLDTAAWEEVFDLKLGWDVTAFGR CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEECCCEEEEECC NNFAAHGLTLFTLRNGSAKGMPYVKCYAEKIMHVRDAQVTPMHFHWRKREDIINRGGGNL CCCEECCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCEEECCHHHHHHHHCCCCEE IVELWNADSNEQTADSDITVVIDGCRQKHTAGSQLRLSPGESICLPPGLYHSFWAEAGFG EEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCEEEECCCCCEECCCCHHHHHHHCCCCC DVLVGEVSSVNDDDHDNHFLQPLDRYNLIDEDEPAQLVLCNEYRQFR CEEECCCCCCCCCCCCCHHHCHHHHCCCCCCCCCCEEEEECCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA