Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
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Accession | NC_011353 |
Length | 5,572,075 |
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The map label for this gene is mokC [H]
Identifier: 209397043
GI number: 209397043
Start: 15419
End: 15571
Strand: Reverse
Name: mokC [H]
Synonym: ECH74115_0016
Alternate gene names: 209397043
Gene position: 15571-15419 (Counterclockwise)
Preceding gene: 209396625
Following gene: 209397112
Centisome position: 0.28
GC content: 52.29
Gene sequence:
>153_bases ATGAAGCAGCATAAGGTGATGATTGTCGCCCTGATCGTCATCTGTATCACCGCCGTAGTGGCGGCGCTGGTAACGAGAAA AGACCTCTGTGAGGTTCACATCCGAACTGGCCAGACGGAGGTTGCTGTTTTCACGGCTTACGAATCCGAGTAA
Upstream 100 bases:
>100_bases AAAGCCCCGAGTGATATTTTACCATCAACCCGAGGCCCCCTATATGCTGAACACATGTAGAGTGCCTCTTACTGACCGTA AGGTCAAGGAGAAGAGAGCA
Downstream 100 bases:
>100_bases GAGCAACGGCGGGGAGTGATCCCCGCCACTTTACAGGTGCTCGCATATCTTCAACGCACCCTATTTTTACCCAGGCCTGC CCACGGGCAGGCTTTTGGGG
Product: putative Hok/gef family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 50; Mature: 50
Protein sequence:
>50_residues MKQHKVMIVALIVICITAVVAALVTRKDLCEVHIRTGQTEVAVFTAYESE
Sequences:
>Translated_50_residues MKQHKVMIVALIVICITAVVAALVTRKDLCEVHIRTGQTEVAVFTAYESE >Mature_50_residues MKQHKVMIVALIVICITAVVAALVTRKDLCEVHIRTGQTEVAVFTAYESE
Specific function: Overlapping regulatory peptide whose translation enables hokC expression (Probable) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hok/gef family [H]
Homologues:
Organism=Escherichia coli, GI1786200, Length=50, Percent_Identity=98, Blast_Score=98, Evalue=9e-23, Organism=Escherichia coli, GI48994874, Length=50, Percent_Identity=98, Blast_Score=98, Evalue=1e-22, Organism=Escherichia coli, GI1787845, Length=50, Percent_Identity=80, Blast_Score=85, Evalue=9e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000021 - InterPro: IPR018084 - ProDom: PD005979 [H]
Pfam domain/function: PF01848 HOK_GEF [H]
EC number: NA
Molecular weight: Translated: 5530; Mature: 5530
Theoretical pI: Translated: 7.42; Mature: 7.42
Prosite motif: PS00556 HOK_GEF
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 8.0 %Cys+Met (Translated Protein) 4.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 8.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQHKVMIVALIVICITAVVAALVTRKDLCEVHIRTGQTEVAVFTAYESE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCC >Mature Secondary Structure MKQHKVMIVALIVICITAVVAALVTRKDLCEVHIRTGQTEVAVFTAYESE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 1943701; 9278503; 10361310 [H]