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The map label for this gene is DppB3 [H]

Identifier: 20806868

GI number: 20806868

Start: 376519

End: 377511

Strand: Direct

Name: DppB3 [H]

Synonym: TTE0351

Alternate gene names: 20806868

Gene position: 376519-377511 (Clockwise)

Preceding gene: 20806867

Following gene: 20806869

Centisome position: 14.0

GC content: 38.37

Gene sequence:

>993_bases
ATGTTACGGTATTTGATTAAGAAATTGTACATCTACATTTTGACTTTCTTTTTTGCAGTGACAATCGACTGGCTGATCCC
CAGGTTTATGCCTGGGGACCCCATTCTTGTATTAGTATCAAGATTTTCGGGGTTACCAGAGTCGGCAAAAGTAATGTATG
GATATTTGATTAAAGCTTTTGGATTGGATTTGCCTTTGTGGAAGCAGTATCTGAATTTCTGGATGGCTATATTTAAAGGT
GATTTGGGTATAAGCATATATCTATATCCTAAACCTGTTTTATCAGTTATCGCTCAGGCCATACCTTATACACTTGTAGT
TTTGCTGCCCTCTATTCTTTTGAGCTGGATAGTGGGGAACTATATAGGGGCTGCAGCAGCAAGGCACAGGAGCCTTGATT
CCAGTATGTTACCTGTATTTTATATTATCACTTCAATTCCATATATGTGGCTTGGAATACTTTTAGCGTGGGCTTTTGGC
GTCCTATTAGGGATTTTTCCAATTGCAGGTGCTTACAGTTTTAGCATGAGACCTAATTGGTCGTGGCAGTTTGTAGCAGA
CTTCTTAAAGCACTGGATATTACCTTTCTTGTCTTTATTTATTGTGCAAATTGGCGGTTGGGCAATAGGCATGAGAAACT
TGATAATATATGAGCTTGAAGCGAATTATTCAAGGTATTTAGAAGCTCTAGGTGCATCCGAAGGGCTTATAAGGCGATAC
GCTTTTAAAAATGCTATACTTCCACAGATTACTGGTTTGGCTCTTCAATTGGGTACAATTGTCGCAGGTTCCATAGCGAC
AGAGGTAGTTTTTGCTTATCCAGGAATGGGATATATATTGTTGCAAGGAATATTAAACCAGGATTATTTTTTGGTCCAAG
GAGTGTTTTTATTCATAATCATTGGGGTATTACTTGCTAACTTTCTGGTAGACATACTTTATATGATAGTTGATCCAAGG
ATCAGACTAGGACTTGGAGGAGAAAATGTATGA

Upstream 100 bases:

>100_bases
CTTACCCAGTAACTTGGGGAGGCAGATGGCAGACAGGCGGTACAATGATGATGATGAAAATAAAACCGAAAGCTTCGCAA
TAATAAATGGGGGTATATAG

Downstream 100 bases:

>100_bases
AAGAGTTTATGTATTTTGCATTTAAAAATACGAAATTTAAAATAGGCCTTAGTATACTGCTTTTTTTCTTGATATTGGCT
ACAATTGGTCCCTACCTTTC

Product: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Products: ADP; phosphate; dipeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 330; Mature: 330

Protein sequence:

>330_residues
MLRYLIKKLYIYILTFFFAVTIDWLIPRFMPGDPILVLVSRFSGLPESAKVMYGYLIKAFGLDLPLWKQYLNFWMAIFKG
DLGISIYLYPKPVLSVIAQAIPYTLVVLLPSILLSWIVGNYIGAAAARHRSLDSSMLPVFYIITSIPYMWLGILLAWAFG
VLLGIFPIAGAYSFSMRPNWSWQFVADFLKHWILPFLSLFIVQIGGWAIGMRNLIIYELEANYSRYLEALGASEGLIRRY
AFKNAILPQITGLALQLGTIVAGSIATEVVFAYPGMGYILLQGILNQDYFLVQGVFLFIIIGVLLANFLVDILYMIVDPR
IRLGLGGENV

Sequences:

>Translated_330_residues
MLRYLIKKLYIYILTFFFAVTIDWLIPRFMPGDPILVLVSRFSGLPESAKVMYGYLIKAFGLDLPLWKQYLNFWMAIFKG
DLGISIYLYPKPVLSVIAQAIPYTLVVLLPSILLSWIVGNYIGAAAARHRSLDSSMLPVFYIITSIPYMWLGILLAWAFG
VLLGIFPIAGAYSFSMRPNWSWQFVADFLKHWILPFLSLFIVQIGGWAIGMRNLIIYELEANYSRYLEALGASEGLIRRY
AFKNAILPQITGLALQLGTIVAGSIATEVVFAYPGMGYILLQGILNQDYFLVQGVFLFIIIGVLLANFLVDILYMIVDPR
IRLGLGGENV
>Mature_330_residues
MLRYLIKKLYIYILTFFFAVTIDWLIPRFMPGDPILVLVSRFSGLPESAKVMYGYLIKAFGLDLPLWKQYLNFWMAIFKG
DLGISIYLYPKPVLSVIAQAIPYTLVVLLPSILLSWIVGNYIGAAAARHRSLDSSMLPVFYIITSIPYMWLGILLAWAFG
VLLGIFPIAGAYSFSMRPNWSWQFVADFLKHWILPFLSLFIVQIGGWAIGMRNLIIYELEANYSRYLEALGASEGLIRRY
AFKNAILPQITGLALQLGTIVAGSIATEVVFAYPGMGYILLQGILNQDYFLVQGVFLFIIIGVLLANFLVDILYMIVDPR
IRLGLGGENV

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789965, Length=344, Percent_Identity=29.3604651162791, Blast_Score=137, Evalue=8e-34,
Organism=Escherichia coli, GI1787053, Length=325, Percent_Identity=31.6923076923077, Blast_Score=131, Evalue=6e-32,
Organism=Escherichia coli, GI1789888, Length=335, Percent_Identity=30.7462686567164, Blast_Score=121, Evalue=6e-29,
Organism=Escherichia coli, GI1787497, Length=325, Percent_Identity=26.7692307692308, Blast_Score=103, Evalue=2e-23,
Organism=Escherichia coli, GI1787761, Length=341, Percent_Identity=30.2052785923754, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI1787550, Length=273, Percent_Identity=25.2747252747253, Blast_Score=89, Evalue=6e-19,
Organism=Escherichia coli, GI1788504, Length=361, Percent_Identity=25.207756232687, Blast_Score=84, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 37242; Mature: 37242

Theoretical pI: Translated: 9.44; Mature: 9.44

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRYLIKKLYIYILTFFFAVTIDWLIPRFMPGDPILVLVSRFSGLPESAKVMYGYLIKAF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHH
GLDLPLWKQYLNFWMAIFKGDLGISIYLYPKPVLSVIAQAIPYTLVVLLPSILLSWIVGN
CCCCHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YIGAAAARHRSLDSSMLPVFYIITSIPYMWLGILLAWAFGVLLGIFPIAGAYSFSMRPNW
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCC
SWQFVADFLKHWILPFLSLFIVQIGGWAIGMRNLIIYELEANYSRYLEALGASEGLIRRY
CHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCEEEEEECCCHHHHHHHHCCCHHHHHHH
AFKNAILPQITGLALQLGTIVAGSIATEVVFAYPGMGYILLQGILNQDYFLVQGVFLFII
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHH
IGVLLANFLVDILYMIVDPRIRLGLGGENV
HHHHHHHHHHHHHHHHHCCCEEECCCCCCC
>Mature Secondary Structure
MLRYLIKKLYIYILTFFFAVTIDWLIPRFMPGDPILVLVSRFSGLPESAKVMYGYLIKAF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHH
GLDLPLWKQYLNFWMAIFKGDLGISIYLYPKPVLSVIAQAIPYTLVVLLPSILLSWIVGN
CCCCHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YIGAAAARHRSLDSSMLPVFYIITSIPYMWLGILLAWAFGVLLGIFPIAGAYSFSMRPNW
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCC
SWQFVADFLKHWILPFLSLFIVQIGGWAIGMRNLIIYELEANYSRYLEALGASEGLIRRY
CHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCEEEEEECCCHHHHHHHHCCCHHHHHHH
AFKNAILPQITGLALQLGTIVAGSIATEVVFAYPGMGYILLQGILNQDYFLVQGVFLFII
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHH
IGVLLANFLVDILYMIVDPRIRLGLGGENV
HHHHHHHHHHHHHHHHHCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; dipeptides [Periplasm]; H2O [C]

Specific reaction: ATP + dipeptides [Periplasm] + H2O = ADP + phosphate + dipeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]