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The map label for this gene is DppC3 [H]

Identifier: 20806869

GI number: 20806869

Start: 377508

End: 378350

Strand: Direct

Name: DppC3 [H]

Synonym: TTE0352

Alternate gene names: 20806869

Gene position: 377508-378350 (Clockwise)

Preceding gene: 20806868

Following gene: 20806870

Centisome position: 14.04

GC content: 38.91

Gene sequence:

>843_bases
ATGAAAGAGTTTATGTATTTTGCATTTAAAAATACGAAATTTAAAATAGGCCTTAGTATACTGCTTTTTTTCTTGATATT
GGCTACAATTGGTCCCTACCTTTCTCACTATAAAGATCCTCTTGAATATGTGAGTATGAGCAATTTGCTTCCTAATAAAG
ATAACTGGCTGGGGACGACCACCTTTGGTCAAGATGTTTTTACTCAGTTTGTATATGGGTTAAGGTCCACATTTTTTATT
GGGCTGTTTGGAGGAGGATTAGCTACTATAATAGGGCTTTTAATCGGTTTTATAGCAGGGTATAGAGGCGGCTGGATAGA
TGAGATTTTGATGATGCTTACAAATATCTTGATAGTGATTCCAACTTTAGCTCTTCTTATAATAATTGCTGCTTATCTCC
CTTACAGAGGGATAGGAATTCAAAGTGTGATAATAGGTTTGACGGCTTGGCCTTGGACTGCAAGGGCTGTGCGAGCTCAA
ACTCTTTCTTTGAAGTCAAGGGAATTCGTGAATCTGGCGAAGATAACGGCTTTACCACCTTTAAAAATAGTTTTAGAAGA
AATAGCACCAAATATGATGTCCTATGTAGTGATGGTATTTATTCTCCAATTTGCAGGTGCGATACTTGCAGCAGTGGGAT
TGGATTTTATAGGTTTGGGACCTACAAGAGGGATTTCTCTTGGATTGATGCTCCAGTACTCCGTGCTGTGGAATGCAATT
CAATTGGGAATATGGTGGTGGTTTATTCCTCCGGGGTTGGCAATAACGATGATAGTAAGTTCGCTGTACTTTCTCAATAT
AGGCCTTGATGAGATATTCAATCCAAGGCTTAGGGAGGAGTGA

Upstream 100 bases:

>100_bases
TATTCATAATCATTGGGGTATTACTTGCTAACTTTCTGGTAGACATACTTTATATGATAGTTGATCCAAGGATCAGACTA
GGACTTGGAGGAGAAAATGT

Downstream 100 bases:

>100_bases
CCAATTTGGTAGAGATAAAGGGTTTGAAAATATATTATAAAACTTTGCGCGGAGACGCTAAAGCATTAGACGACGTGACT
TTTACGATAAATGACAGAGA

Product: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MKEFMYFAFKNTKFKIGLSILLFFLILATIGPYLSHYKDPLEYVSMSNLLPNKDNWLGTTTFGQDVFTQFVYGLRSTFFI
GLFGGGLATIIGLLIGFIAGYRGGWIDEILMMLTNILIVIPTLALLIIIAAYLPYRGIGIQSVIIGLTAWPWTARAVRAQ
TLSLKSREFVNLAKITALPPLKIVLEEIAPNMMSYVVMVFILQFAGAILAAVGLDFIGLGPTRGISLGLMLQYSVLWNAI
QLGIWWWFIPPGLAITMIVSSLYFLNIGLDEIFNPRLREE

Sequences:

>Translated_280_residues
MKEFMYFAFKNTKFKIGLSILLFFLILATIGPYLSHYKDPLEYVSMSNLLPNKDNWLGTTTFGQDVFTQFVYGLRSTFFI
GLFGGGLATIIGLLIGFIAGYRGGWIDEILMMLTNILIVIPTLALLIIIAAYLPYRGIGIQSVIIGLTAWPWTARAVRAQ
TLSLKSREFVNLAKITALPPLKIVLEEIAPNMMSYVVMVFILQFAGAILAAVGLDFIGLGPTRGISLGLMLQYSVLWNAI
QLGIWWWFIPPGLAITMIVSSLYFLNIGLDEIFNPRLREE
>Mature_280_residues
MKEFMYFAFKNTKFKIGLSILLFFLILATIGPYLSHYKDPLEYVSMSNLLPNKDNWLGTTTFGQDVFTQFVYGLRSTFFI
GLFGGGLATIIGLLIGFIAGYRGGWIDEILMMLTNILIVIPTLALLIIIAAYLPYRGIGIQSVIIGLTAWPWTARAVRAQ
TLSLKSREFVNLAKITALPPLKIVLEEIAPNMMSYVVMVFILQFAGAILAAVGLDFIGLGPTRGISLGLMLQYSVLWNAI
QLGIWWWFIPPGLAITMIVSSLYFLNIGLDEIFNPRLREE

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane. Is expressed to facilitate adaptation to nutrient deficiency conditions, which also induce sporulation

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787054, Length=278, Percent_Identity=28.7769784172662, Blast_Score=104, Evalue=6e-24,
Organism=Escherichia coli, GI1787760, Length=267, Percent_Identity=27.3408239700375, Blast_Score=87, Evalue=9e-19,
Organism=Escherichia coli, GI1789964, Length=298, Percent_Identity=28.8590604026846, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI1789889, Length=251, Percent_Identity=27.8884462151394, Blast_Score=86, Evalue=3e-18,
Organism=Escherichia coli, GI1787498, Length=282, Percent_Identity=28.7234042553192, Blast_Score=79, Evalue=4e-16,
Organism=Escherichia coli, GI1788505, Length=227, Percent_Identity=27.3127753303965, Blast_Score=75, Evalue=4e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31277; Mature: 31277

Theoretical pI: Translated: 9.39; Mature: 9.39

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEFMYFAFKNTKFKIGLSILLFFLILATIGPYLSHYKDPLEYVSMSNLLPNKDNWLGTT
CCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCC
TFGQDVFTQFVYGLRSTFFIGLFGGGLATIIGLLIGFIAGYRGGWIDEILMMLTNILIVI
CCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
PTLALLIIIAAYLPYRGIGIQSVIIGLTAWPWTARAVRAQTLSLKSREFVNLAKITALPP
HHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCH
LKIVLEEIAPNMMSYVVMVFILQFAGAILAAVGLDFIGLGPTRGISLGLMLQYSVLWNAI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
QLGIWWWFIPPGLAITMIVSSLYFLNIGLDEIFNPRLREE
HHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHCCCCCCCC
>Mature Secondary Structure
MKEFMYFAFKNTKFKIGLSILLFFLILATIGPYLSHYKDPLEYVSMSNLLPNKDNWLGTT
CCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCC
TFGQDVFTQFVYGLRSTFFIGLFGGGLATIIGLLIGFIAGYRGGWIDEILMMLTNILIVI
CCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
PTLALLIIIAAYLPYRGIGIQSVIIGLTAWPWTARAVRAQTLSLKSREFVNLAKITALPP
HHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCH
LKIVLEEIAPNMMSYVVMVFILQFAGAILAAVGLDFIGLGPTRGISLGLMLQYSVLWNAI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
QLGIWWWFIPPGLAITMIVSSLYFLNIGLDEIFNPRLREE
HHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1766370; 9384377; 3145906 [H]