Definition Methanopyrus kandleri AV19, complete genome.
Accession NC_003551
Length 1,694,969

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The map label for this gene is 20094706

Identifier: 20094706

GI number: 20094706

Start: 1264935

End: 1265888

Strand: Reverse

Name: 20094706

Synonym: MK1270

Alternate gene names: NA

Gene position: 1265888-1264935 (Counterclockwise)

Preceding gene: 20094707

Following gene: 20094704

Centisome position: 74.69

GC content: 68.45

Gene sequence:

>954_bases
GTGGACACGGGGGCGGTTGACGACGGGATGATCGTCGTCGTGCGGTCCGACTACCGGACCCTCGACTCGGACGAACCGAC
CTGGAGCATGAGCTACCGAGTGGTGCGTTACGACCTGGTCACGAGCCCCCGCGTCCTGCCCGTGAGCGGAGGACCCTCGG
AATCGCGGTCGGACCCGCGGATGTACCCGATCGGGGCGTTCTACGACCCCGACCGAGACAGACTCCTCGTGATCACCTAC
CATCCCCGTCTGGTACTACCGGGCGGTGACGAGACGCCGGGCGTCCTGGTGTCGGAGATCTCCGGGGCGTCCCGGGACCC
GCGCTTCGTGGGGTGCCGTACCCTGACGATCACCACGCCGAACGACGCCGACGACGTGAAGCCGGTGCTACCCGAGGTGA
TCGACGGGAAGCCCTACCTGGTGTACGTGGAGCCGGGCGAGCCCTTTGAGGAGGGCGGGACGCGGGAGTACCGGCTCGTG
AGGCTAGATCTGGAGACGGGCGCCCGGGAGGTGCTCGCGGAGTTCGGTGAGCGAACCCGGGTGGCGGGTGAACCTCGGAC
GCTGCATCGCCTCCTCGGAGGGTCGGTACTACCTCGTCTCCGCGCCAGGCTGGGCCGTGGCCGTGCGGGAGTCCGACGGT
CGAGTCGTCCGAGTCAGGCCGCCCGAGGACTGGACGGTCAGGTTCTCCGAGTACCCGCCACCGTACGTCGCCGTCCCGAC
GGCCGGAGGGTACGTCGTCCTCGACTCGACCGATCTGAGCCGGACCGCACTCGGTCGACTGAGACCCGACGGCTCGATCG
AGATCGCGTTGCGGTTCCGACGACATTGGGACGTCCTGCGCTGCCGGTCGACCGATCACAAGTACATGGTGATGGAGTGG
ATCGCGGCCTACTCCTCGGACGGGCGACGGTGCGCGCTGGCCCTGGGGTACAGGGAGATCCCCGACGAAGGTGA

Upstream 100 bases:

>100_bases
CCGGCGACCGGAATGCCCCTCAAATTACCGGTGATCCTGAAGGAGGTCTACAGGTTCCCGGAGTGGGAGGACGCGACCAC
GGCCCTGGTTCCGGTGTTGG

Downstream 100 bases:

>100_bases
GGCCCCGACCGTGTTCCCGCTGGCCGAGAAGGTCGAGGACTGGAACGGTGTGGACTGGGTCGGGCCTTTCGTCCTGGCGA
ACCATCGAACCCTGTACTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 317; Mature: 317

Protein sequence:

>317_residues
MDTGAVDDGMIVVVRSDYRTLDSDEPTWSMSYRVVRYDLVTSPRVLPVSGGPSESRSDPRMYPIGAFYDPDRDRLLVITY
HPRLVLPGGDETPGVLVSEISGASRDPRFVGCRTLTITTPNDADDVKPVLPEVIDGKPYLVYVEPGEPFEEGGTREYRLV
RLDLETGAREVLAEFGERTRVAGEPRTLHRLLGGSVLPRLRARLGRGRAGVRRSSRPSQAARGLDGQVLRVPATVRRRPD
GRRVRRPRLDRSEPDRTRSTETRRLDRDRVAVPTTLGRPALPVDRSQVHGDGVDRGLLLGRATVRAGPGVQGDPRRR

Sequences:

>Translated_317_residues
MDTGAVDDGMIVVVRSDYRTLDSDEPTWSMSYRVVRYDLVTSPRVLPVSGGPSESRSDPRMYPIGAFYDPDRDRLLVITY
HPRLVLPGGDETPGVLVSEISGASRDPRFVGCRTLTITTPNDADDVKPVLPEVIDGKPYLVYVEPGEPFEEGGTREYRLV
RLDLETGAREVLAEFGERTRVAGEPRTLHRLLGGSVLPRLRARLGRGRAGVRRSSRPSQAARGLDGQVLRVPATVRRRPD
GRRVRRPRLDRSEPDRTRSTETRRLDRDRVAVPTTLGRPALPVDRSQVHGDGVDRGLLLGRATVRAGPGVQGDPRRR
>Mature_317_residues
MDTGAVDDGMIVVVRSDYRTLDSDEPTWSMSYRVVRYDLVTSPRVLPVSGGPSESRSDPRMYPIGAFYDPDRDRLLVITY
HPRLVLPGGDETPGVLVSEISGASRDPRFVGCRTLTITTPNDADDVKPVLPEVIDGKPYLVYVEPGEPFEEGGTREYRLV
RLDLETGAREVLAEFGERTRVAGEPRTLHRLLGGSVLPRLRARLGRGRAGVRRSSRPSQAARGLDGQVLRVPATVRRRPD
GRRVRRPRLDRSEPDRTRSTETRRLDRDRVAVPTTLGRPALPVDRSQVHGDGVDRGLLLGRATVRAGPGVQGDPRRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35193; Mature: 35193

Theoretical pI: Translated: 10.71; Mature: 10.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTGAVDDGMIVVVRSDYRTLDSDEPTWSMSYRVVRYDLVTSPRVLPVSGGPSESRSDPR
CCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEEEEEEEECCCCEEEEECCCCCCCCCCCC
MYPIGAFYDPDRDRLLVITYHPRLVLPGGDETPGVLVSEISGASRDPRFVGCRTLTITTP
EEEECCEECCCCCCEEEEEECCEEEECCCCCCCCEEEEECCCCCCCCCEEEEEEEEEECC
NDADDVKPVLPEVIDGKPYLVYVEPGEPFEEGGTREYRLVRLDLETGAREVLAEFGERTR
CCCCCHHHHHHHHHCCCCEEEEECCCCCHHHCCCCEEEEEEEECCCCHHHHHHHHHHHHC
VAGEPRTLHRLLGGSVLPRLRARLGRGRAGVRRSSRPSQAARGLDGQVLRVPATVRRRPD
CCCCHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCEEECCHHHHCCCC
GRRVRRPRLDRSEPDRTRSTETRRLDRDRVAVPTTLGRPALPVDRSQVHGDGVDRGLLLG
CCHHCCCCCCCCCCCCCCCHHHHHHCCCCEECCCCCCCCCCCCCHHHHCCCCCCCCEEEE
RATVRAGPGVQGDPRRR
EEEECCCCCCCCCCCCC
>Mature Secondary Structure
MDTGAVDDGMIVVVRSDYRTLDSDEPTWSMSYRVVRYDLVTSPRVLPVSGGPSESRSDPR
CCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEEEEEEEECCCCEEEEECCCCCCCCCCCC
MYPIGAFYDPDRDRLLVITYHPRLVLPGGDETPGVLVSEISGASRDPRFVGCRTLTITTP
EEEECCEECCCCCCEEEEEECCEEEECCCCCCCCEEEEECCCCCCCCCEEEEEEEEEECC
NDADDVKPVLPEVIDGKPYLVYVEPGEPFEEGGTREYRLVRLDLETGAREVLAEFGERTR
CCCCCHHHHHHHHHCCCCEEEEECCCCCHHHCCCCEEEEEEEECCCCHHHHHHHHHHHHC
VAGEPRTLHRLLGGSVLPRLRARLGRGRAGVRRSSRPSQAARGLDGQVLRVPATVRRRPD
CCCCHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCEEECCHHHHCCCC
GRRVRRPRLDRSEPDRTRSTETRRLDRDRVAVPTTLGRPALPVDRSQVHGDGVDRGLLLG
CCHHCCCCCCCCCCCCCCCHHHHHHCCCCEECCCCCCCCCCCCCHHHHCCCCCCCCEEEE
RATVRAGPGVQGDPRRR
EEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA