| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20094707
Identifier: 20094707
GI number: 20094707
Start: 1266112
End: 1267695
Strand: Reverse
Name: 20094707
Synonym: MK1271
Alternate gene names: NA
Gene position: 1267695-1266112 (Counterclockwise)
Preceding gene: 20094708
Following gene: 20094706
Centisome position: 74.79
GC content: 63.64
Gene sequence:
>1584_bases GTGATCGTCCTCAATAATGGCACTGTCATCATCGTCCACTTGGATGAAAACTTGAAGGCCGACGCCTACCGGCTGAGCGA GTTCGGCCGGCTACTCGGCCACCGGGCCACGGGCAACGGGGTCATACTACTGTACCGGACGCGAGGAGGTTCGACGAACG TGGCCGTCGTGCGACCCTCGGGCGTCACGTACGCGTCCAAGTTGGGGGAGTCGGGGGATCTGGTCGTCTACAGGACCGCC GACGGTGTCGTCGTGACGGTGGTCGGGAACAGGATCGCGCCACCTCGAGGAGAGGTTGTCCGTGTGGGCGCGGAAGGTGG TGTGATCTCGGTGCTGAGGGACGGCGTCCTCCTGGGCTTCGACCGCGACGGCAGGGTGATCTGGGCCTCGAAGATCCCGG ACTTCGAGAAGTACCTGGACTACTCCTGGTCCCCGGCGGATCCGAGGAAGGTGCTCCTATCGTACCGGGACACTTCGGGA CTCGTTCGGGTGATCTCGGTGGACTCGGTTTCGGGCGACGTGAAGTCCCCGAAGTATACCGTAACCACCCTCGACGAGAA TACGGCGTTCGTGTTCGACGACGGCACCGCGGTGACGGTCCTGAAGAACGAGGGGTGGGTGATCCGGACTTACGACCTCG GTGGGGTCCCGATCCACGCCGACAAGGGGGTTATCGTCTACAGGGATCGGTTCGGGACCCTACACGTCGCGATACTGGCG GAGCGCGAATACCTGAGACCCGCCCTGGAAGCCACCGGTTTGGCGGTGTTCAAGCGGGAAGGGGAGTTCATGGCCGTCCG GTACGATGAGTCGGGACGGATCCTCGGATTGGACTGCGAGGTTCACCGGGAACGGACCGACGGCGGGGCAGTCGTCCTGC TGACCGGCGGCGAGGTGGTCCGGCTGGACACCTCGGGCCGGGTCGAGTGGGTTCGCACACTTCCGGACTTCAAGGGGTAC CTGGACTACCGGGGTACGCTGATCACCTACCGGGACACATCGGGCCGCGTGCGCGCGGTGCTGGCGACCGAGGGTGGCGT CGTCGAGGGGCTGAAGAGTAGGGAGACCGACGAGACCGTGGAGTTCACGTTCCCGGACGGCACGTCGGTGGTCATCGGTA AGGACGGGAGGATTCGAGAGACACATCCCGGTGGAACTACACGGGGTGGCGTCAGCGGACGAGGTGAGCAGGGTGAACAG CAAGGGAATCTAGAAGGAAAAGGAAATCGAGAACAAGGTCAAAGGCAGGGTGGTCCGAATCAAGGTGGCAATCAAGGCAG TTCGGGTCAGAGTGGTCAAAACCAGAGCAATCAGGGCCAGGGTGGTCAGCAGCAAGGCAATCAGCAGGGCCAGCAGGGCG GAGAGCAGAACCAGCGGCAGGGCGGTCAGCCGGAGGAGCACGAACAGGGCGAGCAGGGTGGTCAACATGGTCAACGAGGT CCGGAACAGCGGGGTAACCAGAACCGGAATCAAGGCAATCGGAACCGGCAGAGCGGCGGTGAGGGCGGTAAGCGAGGATC CCCGGTCCTGATACCGCCGGTAATCCCACCGAGGCGCCGGGTCCACACCCAACACGCCCTATAG
Upstream 100 bases:
>100_bases TGATGTCGTCGCCCTCGAGGTCGACCCGGACCGGGACGCGGTCCGGGAGCTCCGGGTGGTGTATCGAACGGAGTTGTCGG ACTAACTCGGCGTTCACCGT
Downstream 100 bases:
>100_bases GTTCCCCACGATACCATCCGGGACCCCCGAACCAAGCCGTTCAGGGGAATATCCCGCGTGGTAGGTGAGGTGGAAGCGCC GGCTCTACCAGCCGTCCTCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 527; Mature: 527
Protein sequence:
>527_residues MIVLNNGTVIIVHLDENLKADAYRLSEFGRLLGHRATGNGVILLYRTRGGSTNVAVVRPSGVTYASKLGESGDLVVYRTA DGVVVTVVGNRIAPPRGEVVRVGAEGGVISVLRDGVLLGFDRDGRVIWASKIPDFEKYLDYSWSPADPRKVLLSYRDTSG LVRVISVDSVSGDVKSPKYTVTTLDENTAFVFDDGTAVTVLKNEGWVIRTYDLGGVPIHADKGVIVYRDRFGTLHVAILA EREYLRPALEATGLAVFKREGEFMAVRYDESGRILGLDCEVHRERTDGGAVVLLTGGEVVRLDTSGRVEWVRTLPDFKGY LDYRGTLITYRDTSGRVRAVLATEGGVVEGLKSRETDETVEFTFPDGTSVVIGKDGRIRETHPGGTTRGGVSGRGEQGEQ QGNLEGKGNREQGQRQGGPNQGGNQGSSGQSGQNQSNQGQGGQQQGNQQGQQGGEQNQRQGGQPEEHEQGEQGGQHGQRG PEQRGNQNRNQGNRNRQSGGEGGKRGSPVLIPPVIPPRRRVHTQHAL
Sequences:
>Translated_527_residues MIVLNNGTVIIVHLDENLKADAYRLSEFGRLLGHRATGNGVILLYRTRGGSTNVAVVRPSGVTYASKLGESGDLVVYRTA DGVVVTVVGNRIAPPRGEVVRVGAEGGVISVLRDGVLLGFDRDGRVIWASKIPDFEKYLDYSWSPADPRKVLLSYRDTSG LVRVISVDSVSGDVKSPKYTVTTLDENTAFVFDDGTAVTVLKNEGWVIRTYDLGGVPIHADKGVIVYRDRFGTLHVAILA EREYLRPALEATGLAVFKREGEFMAVRYDESGRILGLDCEVHRERTDGGAVVLLTGGEVVRLDTSGRVEWVRTLPDFKGY LDYRGTLITYRDTSGRVRAVLATEGGVVEGLKSRETDETVEFTFPDGTSVVIGKDGRIRETHPGGTTRGGVSGRGEQGEQ QGNLEGKGNREQGQRQGGPNQGGNQGSSGQSGQNQSNQGQGGQQQGNQQGQQGGEQNQRQGGQPEEHEQGEQGGQHGQRG PEQRGNQNRNQGNRNRQSGGEGGKRGSPVLIPPVIPPRRRVHTQHAL >Mature_527_residues MIVLNNGTVIIVHLDENLKADAYRLSEFGRLLGHRATGNGVILLYRTRGGSTNVAVVRPSGVTYASKLGESGDLVVYRTA DGVVVTVVGNRIAPPRGEVVRVGAEGGVISVLRDGVLLGFDRDGRVIWASKIPDFEKYLDYSWSPADPRKVLLSYRDTSG LVRVISVDSVSGDVKSPKYTVTTLDENTAFVFDDGTAVTVLKNEGWVIRTYDLGGVPIHADKGVIVYRDRFGTLHVAILA EREYLRPALEATGLAVFKREGEFMAVRYDESGRILGLDCEVHRERTDGGAVVLLTGGEVVRLDTSGRVEWVRTLPDFKGY LDYRGTLITYRDTSGRVRAVLATEGGVVEGLKSRETDETVEFTFPDGTSVVIGKDGRIRETHPGGTTRGGVSGRGEQGEQ QGNLEGKGNREQGQRQGGPNQGGNQGSSGQSGQNQSNQGQGGQQQGNQQGQQGGEQNQRQGGQPEEHEQGEQGGQHGQRG PEQRGNQNRNQGNRNRQSGGEGGKRGSPVLIPPVIPPRRRVHTQHAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56938; Mature: 56938
Theoretical pI: Translated: 8.37; Mature: 8.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVLNNGTVIIVHLDENLKADAYRLSEFGRLLGHRATGNGVILLYRTRGGSTNVAVVRPS CEEECCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCEEEECCC GVTYASKLGESGDLVVYRTADGVVVTVVGNRIAPPRGEVVRVGAEGGVISVLRDGVLLGF CCCHHHHCCCCCCEEEEEECCCEEEEEECCCCCCCCCCEEEECCCCCEEEEECCCEEEEE DRDGRVIWASKIPDFEKYLDYSWSPADPRKVLLSYRDTSGLVRVISVDSVSGDVKSPKYT CCCCCEEEECCCCCHHHHHCCCCCCCCCCEEEEEEECCCCEEEEEEEECCCCCCCCCEEE VTTLDENTAFVFDDGTAVTVLKNEGWVIRTYDLGGVPIHADKGVIVYRDRFGTLHVAILA EEEECCCEEEEEECCCEEEEEECCCEEEEEEECCCEEEECCCCEEEEECCCCEEEEEEEE EREYLRPALEATGLAVFKREGEFMAVRYDESGRILGLDCEVHRERTDGGAVVLLTGGEVV CHHHHHHHHHHCCEEEEEECCCEEEEEECCCCCEEEEEEHEEECCCCCCEEEEEECCCEE RLDTSGRVEWVRTLPDFKGYLDYRGTLITYRDTSGRVRAVLATEGGVVEGLKSRETDETV EEECCCCEEEEECCCCCCCEEECCCEEEEEECCCCCEEEEEEECCCHHHCCCCCCCCCEE EFTFPDGTSVVIGKDGRIRETHPGGTTRGGVSGRGEQGEQQGNLEGKGNREQGQRQGGPN EEECCCCCEEEEECCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCC QGGNQGSSGQSGQNQSNQGQGGQQQGNQQGQQGGEQNQRQGGQPEEHEQGEQGGQHGQRG CCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHCCCCHHHHCCCCCHHHHHHHHCCCCCCCC PEQRGNQNRNQGNRNRQSGGEGGKRGSPVLIPPVIPPRRRVHTQHAL CHHHCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHCCHHCCC >Mature Secondary Structure MIVLNNGTVIIVHLDENLKADAYRLSEFGRLLGHRATGNGVILLYRTRGGSTNVAVVRPS CEEECCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCEEEECCC GVTYASKLGESGDLVVYRTADGVVVTVVGNRIAPPRGEVVRVGAEGGVISVLRDGVLLGF CCCHHHHCCCCCCEEEEEECCCEEEEEECCCCCCCCCCEEEECCCCCEEEEECCCEEEEE DRDGRVIWASKIPDFEKYLDYSWSPADPRKVLLSYRDTSGLVRVISVDSVSGDVKSPKYT CCCCCEEEECCCCCHHHHHCCCCCCCCCCEEEEEEECCCCEEEEEEEECCCCCCCCCEEE VTTLDENTAFVFDDGTAVTVLKNEGWVIRTYDLGGVPIHADKGVIVYRDRFGTLHVAILA EEEECCCEEEEEECCCEEEEEECCCEEEEEEECCCEEEECCCCEEEEECCCCEEEEEEEE EREYLRPALEATGLAVFKREGEFMAVRYDESGRILGLDCEVHRERTDGGAVVLLTGGEVV CHHHHHHHHHHCCEEEEEECCCEEEEEECCCCCEEEEEEHEEECCCCCCEEEEEECCCEE RLDTSGRVEWVRTLPDFKGYLDYRGTLITYRDTSGRVRAVLATEGGVVEGLKSRETDETV EEECCCCEEEEECCCCCCCEEECCCEEEEEECCCCCEEEEEEECCCHHHCCCCCCCCCEE EFTFPDGTSVVIGKDGRIRETHPGGTTRGGVSGRGEQGEQQGNLEGKGNREQGQRQGGPN EEECCCCCEEEEECCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCC QGGNQGSSGQSGQNQSNQGQGGQQQGNQQGQQGGEQNQRQGGQPEEHEQGEQGGQHGQRG CCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHCCCCHHHHCCCCCHHHHHHHHCCCCCCCC PEQRGNQNRNQGNRNRQSGGEGGKRGSPVLIPPVIPPRRRVHTQHAL CHHHCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA