Definition Methanopyrus kandleri AV19, complete genome.
Accession NC_003551
Length 1,694,969

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The map label for this gene is 20094692

Identifier: 20094692

GI number: 20094692

Start: 1241966

End: 1242934

Strand: Reverse

Name: 20094692

Synonym: MK1256

Alternate gene names: NA

Gene position: 1242934-1241966 (Counterclockwise)

Preceding gene: 20094693

Following gene: 20094688

Centisome position: 73.33

GC content: 62.64

Gene sequence:

>969_bases
TTGGATAAATCCTCGCTTTACGGTCTCGCGTTGGACGTCACCACGCTCGCCGTCCTCAGGCTCGTGAAGCGCTATCCGGC
CTCAGGTAAGGGGTTCCCCGAGGGTAAGAACTCTGTGGAGCTGGTGTTGGGGGAAGCCAAGGACCTGTTCAGGCGGTTCG
AGCTCGAGGTGTTAGCGGGTGAGAGGGAGCTCTTGGAGGCCTGTTTCGAGGTGCTCAGACTGCCCGGCGTGCCCGTGAAG
GTCGGAGGAGCGTGCGGGAAGGCCGGTCTCGAGACCCTGCGGAAGGTGTTCACGGACCCGGACGCCTCGGTACTCTTCAT
CACCTCGTACGGGCTGGATGAGTTCGAGGAGGTGATGGAGGAGCTGGGCGTGGATCCGGAGGAGATCCGGGCGGAGTGTC
GGCGCCTGCTCGTGCAAGAGGTGGAGTACGAGGGTAGGGTTCACCCGAGCGAGGAGGTGATCGAGTCCTGGGTCGAGGCC
GGGTTCGAGGTGCGGGTCGTCGGTCGGGAGAAGTTCGAGAAGAAAGGCGTCCATTTCGAGGTCTGTTACACGGACAACGT
GATGGCGATCACGAGCGCGAACATGACGACCGCCGGCCTCGAGAGGCTGAGGGAATGCTCGGAGCTCGTGGTACCCCTCG
TGATGGACGTCAAGGCGCCGGTGGCCCTGCTCGAGTACGAGCCGCTGGGGTTCGCGGCGGTGGTCGGTGCGAACGTACAC
GCGGGCGTACTCCACGAGTTCCTCACCCGATCCGACCGCGTGTACGATCGACGCTCGAGTTACCGGAACTTCTACGAGGA
GTACGGTGGTTACCTACCTGAGTGCGAGGGTCTGAGGCACCTGTACCGGGAGTTGAGAGCGGGGTTAGAGTGGTACCTGC
GCGAGGGTTGTCCGGAGATGCTCTGGTGGGTGGAGCCCGAACCTCAGACCATGCCCGACGTTACCCCTAACCTTAACCTC
TACATTTGA

Upstream 100 bases:

>100_bases
GACCGCACGTTTCCGGGTACAACGACCACTTACCAGATCGGAGTAGAAACTTGTATAGTAAAGGACCTCCCCCTCCCCCC
AAGTAACGGGGGCTGTTCAT

Downstream 100 bases:

>100_bases
ACACGCCGAGCTCCTGGAGGAAGTCGAACGGCGTCCGCCATTTCAGTGCTAAACCCTCTCTCCTCAGCTCCTCCGCCATC
TGTGAAAAATGACTCACGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 322; Mature: 322

Protein sequence:

>322_residues
MDKSSLYGLALDVTTLAVLRLVKRYPASGKGFPEGKNSVELVLGEAKDLFRRFELEVLAGERELLEACFEVLRLPGVPVK
VGGACGKAGLETLRKVFTDPDASVLFITSYGLDEFEEVMEELGVDPEEIRAECRRLLVQEVEYEGRVHPSEEVIESWVEA
GFEVRVVGREKFEKKGVHFEVCYTDNVMAITSANMTTAGLERLRECSELVVPLVMDVKAPVALLEYEPLGFAAVVGANVH
AGVLHEFLTRSDRVYDRRSSYRNFYEEYGGYLPECEGLRHLYRELRAGLEWYLREGCPEMLWWVEPEPQTMPDVTPNLNL
YI

Sequences:

>Translated_322_residues
MDKSSLYGLALDVTTLAVLRLVKRYPASGKGFPEGKNSVELVLGEAKDLFRRFELEVLAGERELLEACFEVLRLPGVPVK
VGGACGKAGLETLRKVFTDPDASVLFITSYGLDEFEEVMEELGVDPEEIRAECRRLLVQEVEYEGRVHPSEEVIESWVEA
GFEVRVVGREKFEKKGVHFEVCYTDNVMAITSANMTTAGLERLRECSELVVPLVMDVKAPVALLEYEPLGFAAVVGANVH
AGVLHEFLTRSDRVYDRRSSYRNFYEEYGGYLPECEGLRHLYRELRAGLEWYLREGCPEMLWWVEPEPQTMPDVTPNLNL
YI
>Mature_322_residues
MDKSSLYGLALDVTTLAVLRLVKRYPASGKGFPEGKNSVELVLGEAKDLFRRFELEVLAGERELLEACFEVLRLPGVPVK
VGGACGKAGLETLRKVFTDPDASVLFITSYGLDEFEEVMEELGVDPEEIRAECRRLLVQEVEYEGRVHPSEEVIESWVEA
GFEVRVVGREKFEKKGVHFEVCYTDNVMAITSANMTTAGLERLRECSELVVPLVMDVKAPVALLEYEPLGFAAVVGANVH
AGVLHEFLTRSDRVYDRRSSYRNFYEEYGGYLPECEGLRHLYRELRAGLEWYLREGCPEMLWWVEPEPQTMPDVTPNLNL
YI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36455; Mature: 36455

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKSSLYGLALDVTTLAVLRLVKRYPASGKGFPEGKNSVELVLGEAKDLFRRFELEVLAG
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHCC
ERELLEACFEVLRLPGVPVKVGGACGKAGLETLRKVFTDPDASVLFITSYGLDEFEEVME
CHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHH
ELGVDPEEIRAECRRLLVQEVEYEGRVHPSEEVIESWVEAGFEVRVVGREKFEKKGVHFE
HHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEEEECHHHHHHCCCEEE
VCYTDNVMAITSANMTTAGLERLRECSELVVPLVMDVKAPVALLEYEPLGFAAVVGANVH
EEEECCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHEEECCCCCHHHHCCCCH
AGVLHEFLTRSDRVYDRRSSYRNFYEEYGGYLPECEGLRHLYRELRAGLEWYLREGCPEM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHH
LWWVEPEPQTMPDVTPNLNLYI
EEEECCCCCCCCCCCCCCCEEC
>Mature Secondary Structure
MDKSSLYGLALDVTTLAVLRLVKRYPASGKGFPEGKNSVELVLGEAKDLFRRFELEVLAG
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHCC
ERELLEACFEVLRLPGVPVKVGGACGKAGLETLRKVFTDPDASVLFITSYGLDEFEEVME
CHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHH
ELGVDPEEIRAECRRLLVQEVEYEGRVHPSEEVIESWVEAGFEVRVVGREKFEKKGVHFE
HHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEEEECHHHHHHCCCEEE
VCYTDNVMAITSANMTTAGLERLRECSELVVPLVMDVKAPVALLEYEPLGFAAVVGANVH
EEEECCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHEEECCCCCHHHHCCCCH
AGVLHEFLTRSDRVYDRRSSYRNFYEEYGGYLPECEGLRHLYRELRAGLEWYLREGCPEM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHH
LWWVEPEPQTMPDVTPNLNLYI
EEEECCCCCCCCCCCCCCCEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA