| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20094688
Identifier: 20094688
GI number: 20094688
Start: 1236233
End: 1236910
Strand: Reverse
Name: 20094688
Synonym: MK1252
Alternate gene names: NA
Gene position: 1236910-1236233 (Counterclockwise)
Preceding gene: 20094692
Following gene: 20094687
Centisome position: 72.98
GC content: 61.65
Gene sequence:
>678_bases TTGGTCGGATCGCACGCTCATATCCCGATACCCCATGATCCGGTCGAGCGGATCCGGACACTCCGAGTCCTGAGGGAGGT CTACCGCCGGGGGAGGAAGCCGAGTCTGGAGGTTACTTATCGGACCGTCAACGGGAGCACCTGCGGCCCGTACTACGTGG CCCGTTGGCGTCGCGACTCCCGGTTCAAGCACGGGCGGACTCTCTACCTGGGTAAGTCCGAGAACGAGAGTGTTTCCTTC GTCGAGTGGTTGGTCTCACTGGATCGGGGAGAGGTCCTCGAGCTCGCGCGACACCTCATGCGCAACCTCCGCTCGGTGCT CAAGACCCTCCTGACCGAGGTCTCGGACCTCCCGTACAAGAAGGTCCGACGAGTACTCGCCCGCGGGCTCGCGCTGGCCT TTGACGCCAGACCCGCGGGATCTCCCGGAATCCGGGACGTGTTAGAGGAACTCCCCGACCGATTGGAATCCTTCGTGATC AGGACCCTCGGAGGATGGCCCGCCCACTACTCCTCGTACTTGGAATCATCCGTTCGCGCAGGAGATTCCTCGACGGGAGG TACGAGGTACCCGACGTGGAGTTGGAACTCCAGCGCTGGAAGCTGCGGCACGGCCGGTGACGCTAGTAAGAGTGTTCACG TACTATCGTCGACTAACGCTCATGTCGATATAGTATGA
Upstream 100 bases:
>100_bases CGTGGTCCCCTATCGTGATGACAAAGATTATATCCTGGGGTACCACTCTACCCTTGTCTCCATACAATTTGGAGGCACAT CGGGGGATCACGTGCCGGGG
Downstream 100 bases:
>100_bases TTCACACATGAATTACATACTATCAGCGGACGATAGTAATACCATCGTTCAGGGTTAAGATCGGCACTAGCGTGGGTAAG AATATCTCAAGTGTTTGTAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 225; Mature: 225
Protein sequence:
>225_residues MVGSHAHIPIPHDPVERIRTLRVLREVYRRGRKPSLEVTYRTVNGSTCGPYYVARWRRDSRFKHGRTLYLGKSENESVSF VEWLVSLDRGEVLELARHLMRNLRSVLKTLLTEVSDLPYKKVRRVLARGLALAFDARPAGSPGIRDVLEELPDRLESFVI RTLGGWPAHYSSYLESSVRAGDSSTGGTRYPTWSWNSSAGSCGTAGDASKSVHVLSSTNAHVDIV
Sequences:
>Translated_225_residues MVGSHAHIPIPHDPVERIRTLRVLREVYRRGRKPSLEVTYRTVNGSTCGPYYVARWRRDSRFKHGRTLYLGKSENESVSF VEWLVSLDRGEVLELARHLMRNLRSVLKTLLTEVSDLPYKKVRRVLARGLALAFDARPAGSPGIRDVLEELPDRLESFVI RTLGGWPAHYSSYLESSVRAGDSSTGGTRYPTWSWNSSAGSCGTAGDASKSVHVLSSTNAHVDIV >Mature_225_residues MVGSHAHIPIPHDPVERIRTLRVLREVYRRGRKPSLEVTYRTVNGSTCGPYYVARWRRDSRFKHGRTLYLGKSENESVSF VEWLVSLDRGEVLELARHLMRNLRSVLKTLLTEVSDLPYKKVRRVLARGLALAFDARPAGSPGIRDVLEELPDRLESFVI RTLGGWPAHYSSYLESSVRAGDSSTGGTRYPTWSWNSSAGSCGTAGDASKSVHVLSSTNAHVDIV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25175; Mature: 25175
Theoretical pI: Translated: 10.26; Mature: 10.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVGSHAHIPIPHDPVERIRTLRVLREVYRRGRKPSLEVTYRTVNGSTCGPYYVARWRRDS CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCHHHHHHCHHC RFKHGRTLYLGKSENESVSFVEWLVSLDRGEVLELARHLMRNLRSVLKTLLTEVSDLPYK CCCCCCEEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH KVRRVLARGLALAFDARPAGSPGIRDVLEELPDRLESFVIRTLGGWPAHYSSYLESSVRA HHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHC GDSSTGGTRYPTWSWNSSAGSCGTAGDASKSVHVLSSTNAHVDIV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEECC >Mature Secondary Structure MVGSHAHIPIPHDPVERIRTLRVLREVYRRGRKPSLEVTYRTVNGSTCGPYYVARWRRDS CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCHHHHHHCHHC RFKHGRTLYLGKSENESVSFVEWLVSLDRGEVLELARHLMRNLRSVLKTLLTEVSDLPYK CCCCCCEEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH KVRRVLARGLALAFDARPAGSPGIRDVLEELPDRLESFVIRTLGGWPAHYSSYLESSVRA HHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHC GDSSTGGTRYPTWSWNSSAGSCGTAGDASKSVHVLSSTNAHVDIV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA